RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Cdk19Q8BWD8 501 aa21.4■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Naa30Q8CES0 364 aa21.4■■□□□ 1.02
Sqstm1-201ENSMUST00000015981 Dync1i1O88485 628 aa21.39■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 U2af2P26369 475 aaKnown RBP21.39■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Chd1P40201 1711 aa21.39■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Samm50Q8BGH2 469 aa21.39■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Cdk12Q14AX6 1484 aaKnown RBP21.39■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Hsp90b1P08113 802 aaKnown RBP21.39■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Tshz3Q8CGV9 1081 aa21.39■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Strn4P58404 760 aa21.38■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Chl1P70232 1209 aa21.38■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Wdr93Q402B2 695 aa21.38■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Kcnf1Q7TSH7 493 aa21.38■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Adam1bQ8R534 806 aa21.38■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Med4Q9CQA5 270 aa21.38■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Uhrf1bp1lA2RSJ4 1457 aa21.38■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Igf1rQ60751 1373 aa21.38■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Kiaa0754Q69ZZ9 979 aa21.38■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Ccdc7Q9D541 371 aa21.38■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Ythdc2B2RR83 1445 aaKnown RBP21.37■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Ube2hP62257 183 aa21.37■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Oxsr1Q6P9R2 527 aa21.37■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Cfap73J3QPZ5 306 aa21.37■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Hmox1P14901 289 aa21.37■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Utp18Q5SSI6 552 aaKnown RBP21.37■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Ptpdc1Q6NZK8 747 aa21.37■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 CltcQ68FD5 1675 aaKnown RBP21.37■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Elmsan1E9Q2I4 1089 aaKnown RBP21.36■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Nfatc2ipO09130 412 aa21.36■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Zscan22Q8BGS5 496 aa21.36■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Sytl4Q9R0Q1 673 aa21.36■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Cep170bQ80U49 1574 aa21.36■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 1700019A02RikA0A087WPV9 146 aa21.36■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Shq1Q7TMX5 569 aa21.36■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Stac3Q8BZ71 360 aa21.36■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Pdzrn3Q69ZS0 1063 aa21.35■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Tbc1d8Q9Z1A9 1134 aa21.35■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Gli2Q0VGT2 1544 aa21.35■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Mcm3P25206 812 aaKnown RBP21.34■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 CtifQ6PEE2 600 aaKnown RBP21.34■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Ccdc178Q8CDV0 866 aa21.34■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Tpm3P21107 285 aaKnown RBP21.34■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Jakmip1Q8BVL9 626 aa21.34■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Kif20bQ80WE4 1774 aaKnown RBP21.34■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Spef2Q8C9J3 1734 aa21.34■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Bms1Q6PGF5 1284 aaKnown RBP21.33■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Cc2d1aQ8K1A6 943 aa21.33■■□□□ 1.01
Sqstm1-201ENSMUST00000015981 Plin1Q8CGN5 517 aa21.32■■□□□ 1
Sqstm1-201ENSMUST00000015981 Slx4ipQ9D7Y9 413 aa21.32■■□□□ 1
Sqstm1-201ENSMUST00000015981 Ccdc162pQ0VG85 912 aa21.32■■□□□ 1
Sqstm1-201ENSMUST00000015981 Ints3Q7TPD0 1041 aaKnown RBP21.32■■□□□ 1
Sqstm1-201ENSMUST00000015981 Rsph6aQ8CDR2 708 aa21.32■■□□□ 1
Sqstm1-201ENSMUST00000015981 Atp10aO54827 1508 aa21.32■■□□□ 1
Sqstm1-201ENSMUST00000015981 4930407I10RikD3Z5T8 1512 aa21.32■■□□□ 1
Sqstm1-201ENSMUST00000015981 Cspp1B2RX88 1205 aa21.32■■□□□ 1
Sqstm1-201ENSMUST00000015981 Oas2E9Q9A9 742 aa21.32■■□□□ 1
Sqstm1-201ENSMUST00000015981 Tpd52l1O54818 204 aa21.32■■□□□ 1
Sqstm1-201ENSMUST00000015981 Nphp1Q9QY53 687 aa21.32■■□□□ 1
Sqstm1-201ENSMUST00000015981 CebpzP53569 1052 aaKnown RBP21.31■■□□□ 1
Sqstm1-201ENSMUST00000015981 Cdkn1cP49919 348 aa21.31■■□□□ 1
Sqstm1-201ENSMUST00000015981 PtprmP28828 1452 aa21.3■■□□□ 1
Sqstm1-201ENSMUST00000015981 Stx6Q9JKK1 255 aa21.3■■□□□ 1
Sqstm1-201ENSMUST00000015981 Pmfbp1Q9WVQ0 1022 aa21.3■■□□□ 1
Sqstm1-201ENSMUST00000015981 Klhl34A2AI76 644 aa21.29■■□□□ 1
Sqstm1-201ENSMUST00000015981 RdxP26043 583 aaKnown RBP21.29■■□□□ 1
Sqstm1-201ENSMUST00000015981 Srgap3Q812A2 1099 aa21.29■■□□□ 1
Sqstm1-201ENSMUST00000015981 Sf3a1Q8K4Z5 791 aaKnown RBP21.29■■□□□ 1
Sqstm1-201ENSMUST00000015981 Fam114a1Q9D281 569 aa21.29■■□□□ 1
Sqstm1-201ENSMUST00000015981 Utp14aQ640M1 767 aaKnown RBP21.29■■□□□ 1
Sqstm1-201ENSMUST00000015981 Snx13Q6PHS6 957 aa21.29■■□□□ 1
Sqstm1-201ENSMUST00000015981 Brpf3B2KF05 1204 aaKnown RBP21.28■■□□□ 1
Sqstm1-201ENSMUST00000015981 Zkscan7E9PVW1 718 aa21.28■■□□□ 1
Sqstm1-201ENSMUST00000015981 Rab3gap1Q80UJ7 981 aa21.28■■□□□ 1
Sqstm1-201ENSMUST00000015981 Zfp804bA0A0G2JGH6 1343 aa21.28■■□□□ 1
Sqstm1-201ENSMUST00000015981 Gnai2P08752 355 aaKnown RBP21.27■■□□□ 1
Sqstm1-201ENSMUST00000015981 Ms4a2P20490 235 aa21.27■■□□□ 1
Sqstm1-201ENSMUST00000015981 Usp25P57080 1055 aa21.27■■□□□ 1
Sqstm1-201ENSMUST00000015981 Bach1P97302 739 aa21.27■■□□□ 1
Sqstm1-201ENSMUST00000015981 Cfap157Q0VFX2 523 aa21.27■■□□□ 1
Sqstm1-201ENSMUST00000015981 DpydQ8CHR6 1025 aa21.27■■□□□ 1
Sqstm1-201ENSMUST00000015981 Arhgef28P97433 1693 aa21.27■■□□□ 1
Sqstm1-201ENSMUST00000015981 EappQ5BU09 281 aa21.27■■□□□ 1
Sqstm1-201ENSMUST00000015981 Cchcr1Q8K2I2 770 aa21.27■■□□□ 1
Sqstm1-201ENSMUST00000015981 Noc3lQ8VI84 807 aaKnown RBP21.27■■□□□ 1
Sqstm1-201ENSMUST00000015981 Add3Q9QYB5 706 aaKnown RBP21.27■■□□□ 1
Sqstm1-201ENSMUST00000015981 Knl1Q66JQ7 1612 aa21.26■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Pibf1E9Q6K3 756 aa21.26■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Wdr24Q8CFJ9 790 aa21.26■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Ppp1r42Q8R1Z4 357 aa21.26■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Nop14Q8R3N1 860 aaKnown RBP21.26■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 NktrP30415 1453 aa21.26■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Map3k19E9Q3S4 1311 aa21.26■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Stk31Q99MW1 1018 aa21.26■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 PdcQ9QW08 244 aa21.26■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Pof1bQ8K4L4 587 aa21.25■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Plekhg1F6S200 1446 aa21.25■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Mmp8O70138 465 aa21.25■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Smc3Q9CW03 1217 aaKnown RBP21.25■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Dip2aQ8BWT5 1523 aa21.25■□□□□ 0.99
Sqstm1-201ENSMUST00000015981 Prrc2bQ7TPM1 1486 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms