RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Plekhm2Q80TQ5 1018 aa18.91■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Polr3glQ8R0C0 218 aa18.91■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Atg3Q9CPX6 314 aa18.91■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Bsdc1Q80Y55 427 aa18.9■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Lrit1Q8K099 624 aa18.9■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Taf7Q9R1C0 341 aa18.9■□□□□ 0.62
Ercc1-201ENSMUST00000003645 Pnpla7A2AJ88 1352 aa18.89■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Ly75Q60767 1723 aa18.89■□□□□ 0.61
Ercc1-201ENSMUST00000003645 GckrQ91X44 587 aa18.89■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Ppfibp2O35711 882 aa18.88■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Afg3l2Q8JZQ2 802 aaKnown RBP18.88■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Tmem119Q8R138 280 aa18.88■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Pdia6Q922R8 440 aaKnown RBP18.88■□□□□ 0.61
Ercc1-201ENSMUST00000003645 PigbQ9JJQ0 542 aa18.88■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Cap2Q9CYT6 476 aa18.87■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Tiam2Q6ZPF3 1715 aa18.86■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Cnksr1A2A9K7 700 aa18.86■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Tnnt1O88346 262 aa18.86■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Irx6Q9ER75 438 aa18.86■□□□□ 0.61
Ercc1-201ENSMUST00000003645 TefQ9JLC6 301 aa18.86■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Tnnt3Q9QZ47 272 aa18.86■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Adcy9P51830 1353 aa18.86■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Shank3Q4ACU6 1730 aa18.85■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Sos2Q02384 1333 aa18.85■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Kiaa0319Q5SZV5 1081 aa18.85■□□□□ 0.61
Ercc1-201ENSMUST00000003645 PsapQ61207 557 aaKnown RBP18.85■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Dlg5E9Q9R9 1921 aa18.84■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Fkbp4P30416 458 aa18.84■□□□□ 0.61
Ercc1-201ENSMUST00000003645 MarsQ68FL6 902 aaKnown RBP18.84■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Dcaf5Q80T85 946 aa18.84■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Jmjd4Q8BFT6 427 aa18.84■□□□□ 0.61
Ercc1-201ENSMUST00000003645 Nsd3Q6P2L6 1439 aa18.83■□□□□ 0.6
Ercc1-201ENSMUST00000003645 GalcP54818 684 aa18.82■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Cnnm1Q0GA42 951 aa18.82■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Smg7Q5RJH6 1138 aaKnown RBP18.82■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Morc2aQ69ZX6 1030 aa18.82■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Flad1Q8R123 492 aa18.82■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Mylk2Q8VCR8 613 aa18.82■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Klc3Q91W40 508 aa18.82■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Apbb1Q9QXJ1 710 aa18.82■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Arhgap33Q80YF9 1305 aa18.82■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Nectin2P32507 530 aa18.81■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Prkab2Q6PAM0 271 aa18.81■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Abca3Q8R420 1704 aa18.81■□□□□ 0.6
Ercc1-201ENSMUST00000003645 BcorQ8CGN4 1759 aa18.81■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Cers3Q1A3B0 383 aa18.81■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Tmco5bQ80X59 307 aa18.81■□□□□ 0.6
Ercc1-201ENSMUST00000003645 SympkQ80X82 1284 aa18.81■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Sugp2Q8CH09 1067 aa18.81■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Bcl2l13P59017 434 aa18.8■□□□□ 0.6
Ercc1-201ENSMUST00000003645 CoilQ5SU73 570 aa18.8■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Sv2bQ8BG39 683 aa18.8■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Kiaa0319lQ8K135 1048 aa18.8■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Q3UPC7 1272 aa18.79■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Trim58Q5NCC9 485 aa18.79■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Fam83gQ5SWY7 812 aa18.78■□□□□ 0.6
Ercc1-201ENSMUST00000003645 GapdhsQ64467 440 aa18.78■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Pde4dQ01063 747 aa18.77■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Aplp1Q03157 653 aa18.77■□□□□ 0.6
Ercc1-201ENSMUST00000003645 MpndQ3TV65 487 aa18.77■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Aldh1l1Q8R0Y6 902 aa18.77■□□□□ 0.6
Ercc1-201ENSMUST00000003645 Ric1Q69ZJ7 1422 aa18.77■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Rangap1P46061 589 aaKnown RBP18.76■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Gm12185Q5NCB2 835 aa18.76■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Erbb4Q61527 1308 aa18.76■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Ubap1lG3UW59 384 aa18.75■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Cyp2d11P24457 504 aa18.75■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Aifm3Q3TY86 605 aa18.75■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Syde2E9PUP1 1314 aa18.75■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Kndc1Q0KK55 1742 aa18.75■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Ric3Q8BPM6 367 aa18.74■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Pank1Q8K4K6 548 aa18.74■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Ppp1r3fQ9JIG4 799 aa18.74■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Vars2Q3U2A8 1060 aa18.73■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Igfbp6P47880 238 aa18.72■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Slc39a6Q8C145 765 aa18.72■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Trim52Q8CDV4 233 aa18.72■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Echdc1Q9D9V3 322 aa18.72■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Nav1Q8CH77 1875 aa18.72■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Disp3A3KFU9 1347 aa18.72■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Col22a1E9Q7P1 1613 aa18.72■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Clcn1Q64347 994 aa18.71■□□□□ 0.59
Ercc1-201ENSMUST00000003645 Col4a1P02463 1669 aa18.71■□□□□ 0.59
Ercc1-201ENSMUST00000003645 DiexfQ8BTT6 772 aaKnown RBP18.7■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Gigyf1Q99MR1 1044 aaKnown RBP18.7■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Rgs17Q9QZB0 210 aa18.7■□□□□ 0.58
Ercc1-201ENSMUST00000003645 MetP16056 1379 aa18.7■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Flt4P35917 1363 aa18.7■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Maco1Q7TQE6 664 aaKnown RBP18.69■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Znf330Q922H9 316 aa18.69■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Znf521Q6KAS7 1311 aa18.69■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Bicdl1A0JNT9 577 aa18.68■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Irf9Q61179 399 aa18.68■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Miga2Q8BK03 593 aa18.68■□□□□ 0.58
Ercc1-201ENSMUST00000003645 CoblQ5NBX1 1337 aaKnown RBP18.68■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Snapc4Q8BP86 1333 aa18.67■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Ttll7A4Q9F0 912 aa18.67■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Ccdc6D3YZP9 469 aa18.67■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Hmgb2P30681 210 aaKnown RBP18.67■□□□□ 0.58
Ercc1-201ENSMUST00000003645 Ankle2Q6P1H6 964 aa18.67■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms