Protein–RNA interactions for Protein: O35516

Notch2, Neurogenic locus notch homolog protein 2, mousemouse

Predictions only

Length 2,470 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch2O35516 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Notch2O35516 Gm11599-201ENSMUST00000118720 878 ntBASIC20.78■□□□□ 0.92
Notch2O35516 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.78■□□□□ 0.92
Notch2O35516 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Notch2O35516 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Notch2O35516 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.74■□□□□ 0.91
Notch2O35516 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Notch2O35516 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.73■□□□□ 0.91
Notch2O35516 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Notch2O35516 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Notch2O35516 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Notch2O35516 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Notch2O35516 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Notch2O35516 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Notch2O35516 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Notch2O35516 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Notch2O35516 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Notch2O35516 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Notch2O35516 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.62■□□□□ 0.89
Notch2O35516 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Notch2O35516 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Notch2O35516 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Notch2O35516 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Notch2O35516 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Notch2O35516 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Notch2O35516 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.58■□□□□ 0.88
Notch2O35516 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Notch2O35516 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Notch2O35516 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.56■□□□□ 0.88
Notch2O35516 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.56■□□□□ 0.88
Notch2O35516 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.56■□□□□ 0.88
Notch2O35516 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Notch2O35516 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Notch2O35516 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Notch2O35516 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Notch2O35516 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Notch2O35516 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Notch2O35516 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Notch2O35516 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Notch2O35516 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Notch2O35516 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.52■□□□□ 0.88
Notch2O35516 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Notch2O35516 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Notch2O35516 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Notch2O35516 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Notch2O35516 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.47■□□□□ 0.87
Notch2O35516 Gm22567-201ENSMUST00000175542 342 ntBASIC20.47■□□□□ 0.87
Notch2O35516 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Notch2O35516 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Notch2O35516 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Notch2O35516 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Notch2O35516 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Notch2O35516 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Notch2O35516 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Notch2O35516 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Notch2O35516 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.45■□□□□ 0.86
Notch2O35516 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Notch2O35516 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Notch2O35516 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Notch2O35516 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.43■□□□□ 0.86
Notch2O35516 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.43■□□□□ 0.86
Notch2O35516 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Notch2O35516 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.42■□□□□ 0.86
Notch2O35516 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Notch2O35516 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Notch2O35516 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Notch2O35516 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Notch2O35516 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Notch2O35516 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Notch2O35516 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.38■□□□□ 0.85
Notch2O35516 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Notch2O35516 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Notch2O35516 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Notch2O35516 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Notch2O35516 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Notch2O35516 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.34■□□□□ 0.85
Notch2O35516 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Notch2O35516 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Notch2O35516 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Notch2O35516 Mipep-204ENSMUST00000225043 1548 ntBASIC20.32■□□□□ 0.84
Notch2O35516 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Notch2O35516 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Notch2O35516 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Notch2O35516 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.31■□□□□ 0.84
Notch2O35516 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Notch2O35516 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Notch2O35516 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.3■□□□□ 0.84
Notch2O35516 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Notch2O35516 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Notch2O35516 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Notch2O35516 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Notch2O35516 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Notch2O35516 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.27■□□□□ 0.83
Notch2O35516 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.26■□□□□ 0.83
Notch2O35516 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Notch2O35516 Nkain2-201ENSMUST00000092602 558 ntBASIC20.26■□□□□ 0.83
Notch2O35516 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Notch2O35516 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Notch2O35516 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Notch2O35516 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms