Protein–RNA interactions for Protein: O35516

Notch2, Neurogenic locus notch homolog protein 2, mousemouse

Predictions only

Length 2,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch2O35516 Gm8503-201ENSMUST00000118131 455 ntBASIC21.69■■□□□ 1.06
Notch2O35516 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Notch2O35516 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.66■■□□□ 1.06
Notch2O35516 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.65■■□□□ 1.06
Notch2O35516 Psd-208ENSMUST00000224556 2034 ntBASIC21.63■■□□□ 1.05
Notch2O35516 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Notch2O35516 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.6■■□□□ 1.05
Notch2O35516 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Notch2O35516 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Notch2O35516 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.56■■□□□ 1.04
Notch2O35516 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.56■■□□□ 1.04
Notch2O35516 Peli2-204ENSMUST00000226513 1320 ntBASIC21.56■■□□□ 1.04
Notch2O35516 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Notch2O35516 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Notch2O35516 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Notch2O35516 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Notch2O35516 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Notch2O35516 Gm6821-201ENSMUST00000107540 542 ntBASIC21.43■■□□□ 1.02
Notch2O35516 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Notch2O35516 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.41■■□□□ 1.02
Notch2O35516 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Notch2O35516 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Notch2O35516 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Notch2O35516 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Notch2O35516 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.33■■□□□ 1
Notch2O35516 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.33■■□□□ 1
Notch2O35516 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.33■■□□□ 1
Notch2O35516 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Notch2O35516 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.32■■□□□ 1
Notch2O35516 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Notch2O35516 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Notch2O35516 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Notch2O35516 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.31■■□□□ 1
Notch2O35516 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Notch2O35516 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.28■■□□□ 1
Notch2O35516 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.28■■□□□ 1
Notch2O35516 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.28■■□□□ 1
Notch2O35516 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Notch2O35516 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Notch2O35516 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Notch2O35516 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Notch2O35516 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Notch2O35516 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.24■□□□□ 0.99
Notch2O35516 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Notch2O35516 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
Notch2O35516 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Notch2O35516 Gm7432-201ENSMUST00000210343 879 ntBASIC21.21■□□□□ 0.99
Notch2O35516 Gm24970-201ENSMUST00000175582 82 ntBASIC21.21■□□□□ 0.99
Notch2O35516 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Notch2O35516 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Notch2O35516 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Notch2O35516 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Notch2O35516 Mir6538-201ENSMUST00000183713 110 ntBASIC21.17■□□□□ 0.98
Notch2O35516 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Notch2O35516 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Notch2O35516 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Notch2O35516 Cap2-205ENSMUST00000225824 1634 ntBASIC21.09■□□□□ 0.97
Notch2O35516 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Notch2O35516 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.07■□□□□ 0.96
Notch2O35516 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.07■□□□□ 0.96
Notch2O35516 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.07■□□□□ 0.96
Notch2O35516 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Notch2O35516 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.06■□□□□ 0.96
Notch2O35516 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Notch2O35516 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Notch2O35516 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.05■□□□□ 0.96
Notch2O35516 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Notch2O35516 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.03■□□□□ 0.96
Notch2O35516 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Notch2O35516 Gm11175-201ENSMUST00000116172 543 ntBASIC21.01■□□□□ 0.95
Notch2O35516 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Notch2O35516 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21■□□□□ 0.95
Notch2O35516 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Notch2O35516 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Notch2O35516 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Notch2O35516 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.98■□□□□ 0.95
Notch2O35516 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Notch2O35516 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Notch2O35516 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Notch2O35516 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Notch2O35516 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.92■□□□□ 0.94
Notch2O35516 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Notch2O35516 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Notch2O35516 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Notch2O35516 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.9■□□□□ 0.94
Notch2O35516 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.9■□□□□ 0.94
Notch2O35516 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.88■□□□□ 0.93
Notch2O35516 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Notch2O35516 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.88■□□□□ 0.93
Notch2O35516 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Notch2O35516 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Notch2O35516 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Notch2O35516 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.85■□□□□ 0.93
Notch2O35516 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Notch2O35516 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Notch2O35516 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Notch2O35516 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Notch2O35516 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Notch2O35516 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Notch2O35516 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms