Protein–RNA interactions for Protein: Q9UKI3

VPREB3, Pre-B lymphocyte protein 3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3Q9UKI3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 AC008556.1-201ENST00000610908 2040 ntBASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 KRT18P23-201ENST00000435622 1283 ntBASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.92□□□□□ -0.02
VPREB3Q9UKI3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 KRT8P32-201ENST00000512863 1461 ntBASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 HCG4P8-203ENST00000443049 980 ntBASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 SPDYE13P-201ENST00000445314 798 ntBASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 AC092597.1-201ENST00000487352 616 ntBASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 MIR3917-201ENST00000580971 93 ntBASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 HOXB1-202ENST00000577092 1414 ntBASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VPREB3Q9UKI3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 AL157888.1-201ENST00000631930 593 ntBASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
VPREB3Q9UKI3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VPREB3Q9UKI3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
VPREB3Q9UKI3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.89□□□□□ -0.03
VPREB3Q9UKI3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms