Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SFTPBP07988 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SFTPBP07988 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SFTPBP07988 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SFTPBP07988 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SFTPBP07988 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SFTPBP07988 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SFTPBP07988 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.33■□□□□ 0.2
SFTPBP07988 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SFTPBP07988 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SFTPBP07988 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SFTPBP07988 FP475955.4-201ENST00000623131 1990 ntBASIC16.33■□□□□ 0.2
SFTPBP07988 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SFTPBP07988 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SFTPBP07988 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SFTPBP07988 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SFTPBP07988 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.32■□□□□ 0.2
SFTPBP07988 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SFTPBP07988 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SFTPBP07988 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.32■□□□□ 0.2
SFTPBP07988 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.32■□□□□ 0.2
SFTPBP07988 IRX1P1-201ENST00000438849 1838 ntBASIC16.32■□□□□ 0.2
SFTPBP07988 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SFTPBP07988 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SFTPBP07988 PRKY-204ENST00000533551 1019 ntBASIC16.32■□□□□ 0.2
SFTPBP07988 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.32■□□□□ 0.2
SFTPBP07988 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.32■□□□□ 0.2
SFTPBP07988 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.32■□□□□ 0.2
SFTPBP07988 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.32■□□□□ 0.2
SFTPBP07988 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SFTPBP07988 AC018470.1-201ENST00000624790 3129 ntBASIC16.32■□□□□ 0.2
SFTPBP07988 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.32■□□□□ 0.2
SFTPBP07988 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.32■□□□□ 0.2
SFTPBP07988 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SFTPBP07988 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
SFTPBP07988 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SFTPBP07988 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SFTPBP07988 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SFTPBP07988 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.31■□□□□ 0.2
SFTPBP07988 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SFTPBP07988 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.31■□□□□ 0.2
SFTPBP07988 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.31■□□□□ 0.2
SFTPBP07988 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SFTPBP07988 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.31■□□□□ 0.2
SFTPBP07988 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.31■□□□□ 0.2
SFTPBP07988 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SFTPBP07988 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.31■□□□□ 0.2
SFTPBP07988 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SFTPBP07988 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SFTPBP07988 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SFTPBP07988 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SFTPBP07988 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 FZD10-202ENST00000539839 3282 ntBASIC16.3■□□□□ 0.2
SFTPBP07988 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SFTPBP07988 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.3■□□□□ 0.2
SFTPBP07988 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SFTPBP07988 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.3■□□□□ 0.2
SFTPBP07988 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.3■□□□□ 0.2
SFTPBP07988 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.3■□□□□ 0.2
SFTPBP07988 AC133681.1-201ENST00000465482 601 ntBASIC16.3■□□□□ 0.2
SFTPBP07988 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.3■□□□□ 0.2
SFTPBP07988 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SFTPBP07988 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SFTPBP07988 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms