Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR3914-2-201ENST00000637339 95 ntBASIC-3.79□□□□□ -3.02
COL6A5A8TX70 Y_RNA.89-201ENST00000363031 102 ntBASIC-3.8□□□□□ -3.02
COL6A5A8TX70 AC004792.1-201ENST00000614523 137 ntBASIC-3.8□□□□□ -3.02
COL6A5A8TX70 Y_RNA.210-201ENST00000364161 110 ntBASIC-3.8□□□□□ -3.02
COL6A5A8TX70 MIR4666B-201ENST00000578142 81 ntBASIC-3.8□□□□□ -3.02
COL6A5A8TX70 RNU6-1135P-201ENST00000411083 103 ntBASIC-3.81□□□□□ -3.02
COL6A5A8TX70 RNU4-71P-201ENST00000516258 113 ntBASIC-3.81□□□□□ -3.02
COL6A5A8TX70 RNU6-147P-201ENST00000383983 107 ntBASIC-3.82□□□□□ -3.02
COL6A5A8TX70 MIR3915-201ENST00000578518 97 ntBASIC-3.83□□□□□ -3.02
COL6A5A8TX70 MIR548X2-201ENST00000579776 100 ntBASIC-3.83□□□□□ -3.02
COL6A5A8TX70 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.84□□□□□ -3.02
COL6A5A8TX70 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.84□□□□□ -3.02
COL6A5A8TX70 AL353621.2-201ENST00000605340 133 ntBASIC-3.84□□□□□ -3.02
COL6A5A8TX70 AF246928.1-201ENST00000623768 87 ntBASIC-3.84□□□□□ -3.02
COL6A5A8TX70 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.84□□□□□ -3.02
COL6A5A8TX70 RN7SKP298-201ENST00000515950 94 ntBASIC-3.85□□□□□ -3.03
COL6A5A8TX70 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.85□□□□□ -3.03
COL6A5A8TX70 AC022559.1-201ENST00000520905 205 ntBASIC-3.85□□□□□ -3.03
COL6A5A8TX70 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.85□□□□□ -3.03
COL6A5A8TX70 MTND4LP9-201ENST00000427694 174 ntBASIC-3.86□□□□□ -3.03
COL6A5A8TX70 RNU6-426P-201ENST00000516464 97 ntBASIC-3.86□□□□□ -3.03
COL6A5A8TX70 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.86□□□□□ -3.03
COL6A5A8TX70 RNU7-152P-201ENST00000458982 64 ntBASIC-3.86□□□□□ -3.03
COL6A5A8TX70 AC141273.2-201ENST00000618989 130 ntBASIC-3.87□□□□□ -3.03
COL6A5A8TX70 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.87□□□□□ -3.03
COL6A5A8TX70 RNU6-499P-201ENST00000365615 107 ntBASIC-3.88□□□□□ -3.03
COL6A5A8TX70 AC113195.1-201ENST00000579952 141 ntBASIC-3.88□□□□□ -3.03
COL6A5A8TX70 IGLL4P-201ENST00000614590 133 ntBASIC-3.88□□□□□ -3.03
COL6A5A8TX70 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.89□□□□□ -3.03
COL6A5A8TX70 MTND5P20-201ENST00000448677 143 ntBASIC-3.89□□□□□ -3.03
COL6A5A8TX70 Y_RNA.20-201ENST00000362479 113 ntBASIC-3.9□□□□□ -3.03
COL6A5A8TX70 Y_RNA.70-201ENST00000362886 110 ntBASIC-3.9□□□□□ -3.03
COL6A5A8TX70 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.9□□□□□ -3.03
COL6A5A8TX70 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.9□□□□□ -3.03
COL6A5A8TX70 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.91□□□□□ -3.03
COL6A5A8TX70 SNORA33.2-201ENST00000365413 134 ntBASIC-3.91□□□□□ -3.03
COL6A5A8TX70 SNORA40-201ENST00000388090 126 ntBASIC-3.91□□□□□ -3.04
COL6A5A8TX70 SNORD113-6-201ENST00000363345 75 ntBASIC-3.92□□□□□ -3.04
COL6A5A8TX70 SNORD116-18-201ENST00000383961 92 ntBASIC-3.92□□□□□ -3.04
COL6A5A8TX70 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.92□□□□□ -3.04
COL6A5A8TX70 AL031737.1-201ENST00000450125 223 ntBASIC-3.92□□□□□ -3.04
COL6A5A8TX70 RNU7-125P-201ENST00000458760 62 ntBASIC-3.92□□□□□ -3.04
COL6A5A8TX70 RNU6-232P-201ENST00000517144 64 ntBASIC-3.94□□□□□ -3.04
COL6A5A8TX70 MIR3611-201ENST00000584484 83 ntBASIC-3.94□□□□□ -3.04
COL6A5A8TX70 MIR569-201ENST00000385228 96 ntBASIC-3.95□□□□□ -3.04
COL6A5A8TX70 Y_RNA.197-201ENST00000364004 102 ntBASIC-4□□□□□ -3.05
COL6A5A8TX70 RNU6-713P-201ENST00000384761 107 ntBASIC-4.01□□□□□ -3.05
COL6A5A8TX70 Y_RNA.200-201ENST00000364018 102 ntBASIC-4.02□□□□□ -3.05
COL6A5A8TX70 RNY4P14-201ENST00000363656 96 ntBASIC-4.03□□□□□ -3.05
COL6A5A8TX70 MIR488-201ENST00000365739 83 ntBASIC-4.03□□□□□ -3.05
COL6A5A8TX70 RNU6-277P-201ENST00000516272 106 ntBASIC-4.04□□□□□ -3.06
COL6A5A8TX70 Y_RNA.573-201ENST00000384763 105 ntBASIC-4.05□□□□□ -3.06
COL6A5A8TX70 RNU6-394P-201ENST00000410735 107 ntBASIC-4.05□□□□□ -3.06
COL6A5A8TX70 Y_RNA.356-201ENST00000365475 113 ntBASIC-4.06□□□□□ -3.06
COL6A5A8TX70 MIR4680-201ENST00000580906 66 ntBASIC-4.06□□□□□ -3.06
COL6A5A8TX70 MIR450A1-201ENST00000362262 91 ntBASIC-4.06□□□□□ -3.06
COL6A5A8TX70 Y_RNA.343-201ENST00000365354 112 ntBASIC-4.06□□□□□ -3.06
COL6A5A8TX70 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-4.07□□□□□ -3.06
COL6A5A8TX70 MIR4509-3-201ENST00000578671 94 ntBASIC-4.07□□□□□ -3.06
COL6A5A8TX70 MIR4509-2-201ENST00000583920 94 ntBASIC-4.07□□□□□ -3.06
COL6A5A8TX70 MIR4509-1-201ENST00000618224 94 ntBASIC-4.07□□□□□ -3.06
COL6A5A8TX70 RNU6-640P-201ENST00000363693 105 ntBASIC-4.09□□□□□ -3.06
COL6A5A8TX70 DEFB108C-201ENST00000400154 252 ntBASIC-4.09□□□□□ -3.06
COL6A5A8TX70 Y_RNA.431-201ENST00000384086 102 ntBASIC-4.1□□□□□ -3.07
COL6A5A8TX70 RNU6-257P-201ENST00000410238 98 ntBASIC-4.1□□□□□ -3.07
COL6A5A8TX70 AC008267.6-201ENST00000441664 139 ntBASIC-4.1□□□□□ -3.07
COL6A5A8TX70 RNU5A-2P-201ENST00000384337 116 ntBASIC-4.1□□□□□ -3.07
COL6A5A8TX70 MTND4P29-201ENST00000503122 1372 ntBASIC-4.11□□□□□ -3.07
COL6A5A8TX70 RNU6-589P-201ENST00000516485 107 ntBASIC-4.12□□□□□ -3.07
COL6A5A8TX70 MIR1255A-201ENST00000408338 113 ntBASIC-4.14□□□□□ -3.07
COL6A5A8TX70 RNU6-804P-201ENST00000384286 107 ntBASIC-4.14□□□□□ -3.07
COL6A5A8TX70 SNORD19B-201ENST00000459623 84 ntBASIC-4.16□□□□□ -3.08
COL6A5A8TX70 AC125388.1-201ENST00000459631 156 ntBASIC-4.16□□□□□ -3.08
COL6A5A8TX70 MIR548F1-201ENST00000408667 84 ntBASIC-4.16□□□□□ -3.08
COL6A5A8TX70 Y_RNA.553-201ENST00000384670 102 ntBASIC-4.17□□□□□ -3.08
COL6A5A8TX70 MTND4LP19-201ENST00000403051 166 ntBASIC-4.17□□□□□ -3.08
COL6A5A8TX70 RNU6-635P-201ENST00000516651 102 ntBASIC-4.17□□□□□ -3.08
COL6A5A8TX70 RNU6-49P-201ENST00000384256 107 ntBASIC-4.17□□□□□ -3.08
COL6A5A8TX70 RNU6-111P-201ENST00000517179 105 ntBASIC-4.17□□□□□ -3.08
COL6A5A8TX70 MTND5P41-201ENST00000517498 206 ntBASIC-4.19□□□□□ -3.08
COL6A5A8TX70 RNU6-956P-201ENST00000458868 103 ntBASIC-4.21□□□□□ -3.08
COL6A5A8TX70 AC006362.1-201ENST00000567392 174 ntBASIC-4.21□□□□□ -3.08
COL6A5A8TX70 Y_RNA.554-201ENST00000384672 102 ntBASIC-4.22□□□□□ -3.08
COL6A5A8TX70 RNU6-985P-201ENST00000410182 104 ntBASIC-4.22□□□□□ -3.08
COL6A5A8TX70 RNU6-751P-201ENST00000516382 101 ntBASIC-4.22□□□□□ -3.09
COL6A5A8TX70 MIR3128-201ENST00000581957 66 ntBASIC-4.22□□□□□ -3.09
COL6A5A8TX70 RNU6-200P-201ENST00000364743 107 ntBASIC-4.23□□□□□ -3.09
COL6A5A8TX70 RNU6-1137P-201ENST00000517073 99 ntBASIC-4.23□□□□□ -3.09
COL6A5A8TX70 RNU7-120P-201ENST00000459334 63 ntBASIC-4.24□□□□□ -3.09
COL6A5A8TX70 RNU6-857P-201ENST00000515893 110 ntBASIC-4.24□□□□□ -3.09
COL6A5A8TX70 RNU6-820P-201ENST00000384273 107 ntBASIC-4.25□□□□□ -3.09
COL6A5A8TX70 RNU6-1056P-201ENST00000383996 107 ntBASIC-4.25□□□□□ -3.09
COL6A5A8TX70 MIR450A2-201ENST00000385022 100 ntBASIC-4.25□□□□□ -3.09
COL6A5A8TX70 Y_RNA.297-201ENST00000364950 91 ntBASIC-4.26□□□□□ -3.09
COL6A5A8TX70 RNU6-506P-201ENST00000516553 94 ntBASIC-4.26□□□□□ -3.09
COL6A5A8TX70 AC009094.1-201ENST00000564443 426 ntBASIC-4.26□□□□□ -3.09
COL6A5A8TX70 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-4.26□□□□□ -3.09
COL6A5A8TX70 RNU6-279P-201ENST00000391297 101 ntBASIC-4.27□□□□□ -3.09
COL6A5A8TX70 SNORD116-14-201ENST00000383894 92 ntBASIC-4.28□□□□□ -3.09
COL6A5A8TX70 SNORD116-17-201ENST00000383929 92 ntBASIC-4.28□□□□□ -3.09
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms