Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MIR4643-201ENST00000577473 78 ntBASIC-2.71□□□□□ -2.84
VPS13DQ5THJ4 SNORD11.1-201ENST00000459482 85 ntBASIC-2.71□□□□□ -2.84
VPS13DQ5THJ4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-2.72□□□□□ -2.84
VPS13DQ5THJ4 AC090582.1-201ENST00000636321 199 ntBASIC-2.72□□□□□ -2.84
VPS13DQ5THJ4 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.72□□□□□ -2.85
VPS13DQ5THJ4 SNORD58.1-201ENST00000391313 66 ntBASIC-2.72□□□□□ -2.85
VPS13DQ5THJ4 MTND4P17-201ENST00000470444 350 ntBASIC-2.72□□□□□ -2.85
VPS13DQ5THJ4 U6.95-201ENST00000636931 70 ntBASIC-2.72□□□□□ -2.85
VPS13DQ5THJ4 RNU6-918P-201ENST00000391219 106 ntBASIC-2.73□□□□□ -2.85
VPS13DQ5THJ4 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.74□□□□□ -2.85
VPS13DQ5THJ4 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.74□□□□□ -2.85
VPS13DQ5THJ4 RNU6-772P-201ENST00000516042 105 ntBASIC-2.74□□□□□ -2.85
VPS13DQ5THJ4 RNU4-71P-201ENST00000516258 113 ntBASIC-2.74□□□□□ -2.85
VPS13DQ5THJ4 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.74□□□□□ -2.85
VPS13DQ5THJ4 RNU6-751P-201ENST00000516382 101 ntBASIC-2.75□□□□□ -2.85
VPS13DQ5THJ4 RNU6-797P-201ENST00000363101 109 ntBASIC-2.75□□□□□ -2.85
VPS13DQ5THJ4 Y_RNA.553-201ENST00000384670 102 ntBASIC-2.76□□□□□ -2.85
VPS13DQ5THJ4 RNU6-663P-201ENST00000391105 106 ntBASIC-2.76□□□□□ -2.85
VPS13DQ5THJ4 MIR1302-5-201ENST00000408164 150 ntBASIC-2.77□□□□□ -2.85
VPS13DQ5THJ4 RNU6-109P-201ENST00000516364 107 ntBASIC-2.77□□□□□ -2.85
VPS13DQ5THJ4 RNU6-184P-201ENST00000516514 107 ntBASIC-2.77□□□□□ -2.85
VPS13DQ5THJ4 RNU6-838P-201ENST00000363399 108 ntBASIC-2.77□□□□□ -2.85
VPS13DQ5THJ4 MIR590-201ENST00000385008 97 ntBASIC-2.77□□□□□ -2.85
VPS13DQ5THJ4 RNU6-986P-201ENST00000363133 102 ntBASIC-2.77□□□□□ -2.85
VPS13DQ5THJ4 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.77□□□□□ -2.85
VPS13DQ5THJ4 RNU6-497P-201ENST00000365316 104 ntBASIC-2.77□□□□□ -2.85
VPS13DQ5THJ4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.77□□□□□ -2.85
VPS13DQ5THJ4 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.77□□□□□ -2.85
VPS13DQ5THJ4 SNORA40.4-201ENST00000390971 128 ntBASIC-2.77□□□□□ -2.85
VPS13DQ5THJ4 RNU6-255P-201ENST00000516957 105 ntBASIC-2.78□□□□□ -2.85
VPS13DQ5THJ4 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.78□□□□□ -2.85
VPS13DQ5THJ4 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.78□□□□□ -2.85
VPS13DQ5THJ4 AC006362.1-201ENST00000567392 174 ntBASIC-2.78□□□□□ -2.85
VPS13DQ5THJ4 MIR4679-1-201ENST00000637619 75 ntBASIC-2.78□□□□□ -2.85
VPS13DQ5THJ4 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.79□□□□□ -2.86
VPS13DQ5THJ4 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.79□□□□□ -2.86
VPS13DQ5THJ4 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.79□□□□□ -2.86
VPS13DQ5THJ4 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.79□□□□□ -2.86
VPS13DQ5THJ4 SNORA81.3-201ENST00000517283 198 ntBASIC-2.79□□□□□ -2.86
VPS13DQ5THJ4 RNY4P14-201ENST00000363656 96 ntBASIC-2.8□□□□□ -2.86
VPS13DQ5THJ4 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.8□□□□□ -2.86
VPS13DQ5THJ4 RNU6-634P-201ENST00000459134 106 ntBASIC-2.8□□□□□ -2.86
VPS13DQ5THJ4 RNU4-14P-201ENST00000410858 122 ntBASIC-2.81□□□□□ -2.86
VPS13DQ5THJ4 SNORD116-4-201ENST00000384733 96 ntBASIC-2.82□□□□□ -2.86
VPS13DQ5THJ4 SNORD116-21-201ENST00000384507 92 ntBASIC-2.82□□□□□ -2.86
VPS13DQ5THJ4 RNU6-277P-201ENST00000516272 106 ntBASIC-2.82□□□□□ -2.86
VPS13DQ5THJ4 RNU6-620P-201ENST00000384017 96 ntBASIC-2.83□□□□□ -2.86
VPS13DQ5THJ4 RNU6-907P-201ENST00000390924 102 ntBASIC-2.83□□□□□ -2.86
VPS13DQ5THJ4 RNU6-956P-201ENST00000458868 103 ntBASIC-2.83□□□□□ -2.86
VPS13DQ5THJ4 MIR548X2-201ENST00000579776 100 ntBASIC-2.83□□□□□ -2.86
VPS13DQ5THJ4 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.83□□□□□ -2.86
VPS13DQ5THJ4 SNORD116-18-201ENST00000383961 92 ntBASIC-2.83□□□□□ -2.86
VPS13DQ5THJ4 RNU6-959P-201ENST00000384671 107 ntBASIC-2.83□□□□□ -2.86
VPS13DQ5THJ4 RNU6-219P-201ENST00000364728 107 ntBASIC-2.84□□□□□ -2.86
VPS13DQ5THJ4 RNU6-687P-201ENST00000516443 89 ntBASIC-2.84□□□□□ -2.86
VPS13DQ5THJ4 SNORA25.4-201ENST00000363666 124 ntBASIC-2.85□□□□□ -2.87
VPS13DQ5THJ4 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.85□□□□□ -2.87
VPS13DQ5THJ4 AC103706.3-201ENST00000636297 85 ntBASIC-2.85□□□□□ -2.87
VPS13DQ5THJ4 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.86□□□□□ -2.87
VPS13DQ5THJ4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.86□□□□□ -2.87
VPS13DQ5THJ4 RNU7-197P-201ENST00000458836 62 ntBASIC-2.86□□□□□ -2.87
VPS13DQ5THJ4 AL589823.1-201ENST00000429577 183 ntBASIC-2.86□□□□□ -2.87
VPS13DQ5THJ4 RNU6-675P-201ENST00000384236 104 ntBASIC-2.87□□□□□ -2.87
VPS13DQ5THJ4 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.87□□□□□ -2.87
VPS13DQ5THJ4 Y_RNA.554-201ENST00000384672 102 ntBASIC-2.88□□□□□ -2.87
VPS13DQ5THJ4 RNU6-713P-201ENST00000384761 107 ntBASIC-2.88□□□□□ -2.87
VPS13DQ5THJ4 SNORA40.13-201ENST00000516379 120 ntBASIC-2.88□□□□□ -2.87
VPS13DQ5THJ4 Y_RNA.200-201ENST00000364018 102 ntBASIC-2.88□□□□□ -2.87
VPS13DQ5THJ4 SNORD33.1-201ENST00000516213 88 ntBASIC-2.88□□□□□ -2.87
VPS13DQ5THJ4 RNU7-107P-201ENST00000459121 61 ntBASIC-2.89□□□□□ -2.87
VPS13DQ5THJ4 AC044792.1-201ENST00000593294 196 ntBASIC-2.89□□□□□ -2.87
VPS13DQ5THJ4 MIR548BB-201ENST00000626714 66 ntBASIC-2.89□□□□□ -2.87
VPS13DQ5THJ4 MIR1245B-201ENST00000636115 69 ntBASIC-2.89□□□□□ -2.87
VPS13DQ5THJ4 MIR3914-2-201ENST00000637339 95 ntBASIC-2.89□□□□□ -2.87
VPS13DQ5THJ4 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.89□□□□□ -2.87
VPS13DQ5THJ4 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.89□□□□□ -2.87
VPS13DQ5THJ4 AC113195.1-201ENST00000579952 141 ntBASIC-2.89□□□□□ -2.87
VPS13DQ5THJ4 RNU6-1020P-201ENST00000363684 107 ntBASIC-2.9□□□□□ -2.87
VPS13DQ5THJ4 SNORD30.1-201ENST00000391309 70 ntBASIC-2.91□□□□□ -2.88
VPS13DQ5THJ4 RNU6-844P-201ENST00000517175 102 ntBASIC-2.91□□□□□ -2.88
VPS13DQ5THJ4 U7.4-201ENST00000614961 63 ntBASIC-2.91□□□□□ -2.88
VPS13DQ5THJ4 MTATP6P25-201ENST00000574491 261 ntBASIC-2.91□□□□□ -2.88
VPS13DQ5THJ4 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.91□□□□□ -2.88
VPS13DQ5THJ4 MTND4LP9-201ENST00000427694 174 ntBASIC-2.92□□□□□ -2.88
VPS13DQ5THJ4 U4.5-201ENST00000617137 123 ntBASIC-2.92□□□□□ -2.88
VPS13DQ5THJ4 SNORA33.2-201ENST00000365413 134 ntBASIC-2.93□□□□□ -2.88
VPS13DQ5THJ4 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.93□□□□□ -2.88
VPS13DQ5THJ4 RNU6-871P-201ENST00000516122 100 ntBASIC-2.93□□□□□ -2.88
VPS13DQ5THJ4 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.94□□□□□ -2.88
VPS13DQ5THJ4 RNU6-506P-201ENST00000516553 94 ntBASIC-2.94□□□□□ -2.88
VPS13DQ5THJ4 MIR3134-201ENST00000579433 74 ntBASIC-2.94□□□□□ -2.88
VPS13DQ5THJ4 RNU6-209P-201ENST00000384118 107 ntBASIC-2.94□□□□□ -2.88
VPS13DQ5THJ4 AL031737.1-201ENST00000450125 223 ntBASIC-2.94□□□□□ -2.88
VPS13DQ5THJ4 RNU6-294P-201ENST00000364999 102 ntBASIC-2.94□□□□□ -2.88
VPS13DQ5THJ4 AC110620.1-201ENST00000416042 228 ntBASIC-2.94□□□□□ -2.88
VPS13DQ5THJ4 MIR3688-2-201ENST00000636963 87 ntBASIC-2.94□□□□□ -2.88
VPS13DQ5THJ4 Y_RNA.20-201ENST00000362479 113 ntBASIC-2.95□□□□□ -2.88
VPS13DQ5THJ4 RNU6-787P-201ENST00000384032 107 ntBASIC-2.95□□□□□ -2.88
VPS13DQ5THJ4 RNU6-985P-201ENST00000410182 104 ntBASIC-2.95□□□□□ -2.88
VPS13DQ5THJ4 RNU6-894P-201ENST00000517094 105 ntBASIC-2.97□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 345.5 ms