Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MTND4P17-201ENST00000470444 350 ntBASIC-6.41□□□□□ -3.44
TFF3Q07654 Y_RNA.19-201ENST00000362462 99 ntBASIC-6.42□□□□□ -3.44
TFF3Q07654 MIR1252-201ENST00000408861 65 ntBASIC-6.42□□□□□ -3.44
TFF3Q07654 AC093729.1-201ENST00000513074 128 ntBASIC-6.42□□□□□ -3.44
TFF3Q07654 Y_RNA.89-201ENST00000363031 102 ntBASIC-6.43□□□□□ -3.44
TFF3Q07654 RNU6-574P-201ENST00000384265 107 ntBASIC-6.43□□□□□ -3.44
TFF3Q07654 RNU7-197P-201ENST00000458836 62 ntBASIC-6.43□□□□□ -3.44
TFF3Q07654 Y_RNA.276-201ENST00000364732 109 ntBASIC-6.44□□□□□ -3.44
TFF3Q07654 SNORD58C-201ENST00000365223 64 ntBASIC-6.44□□□□□ -3.44
TFF3Q07654 RNU6-1143P-201ENST00000516125 104 ntBASIC-6.44□□□□□ -3.44
TFF3Q07654 RNU6-659P-201ENST00000516454 104 ntBASIC-6.44□□□□□ -3.44
TFF3Q07654 MIR1302-6-201ENST00000408466 90 ntBASIC-6.45□□□□□ -3.44
TFF3Q07654 RNU6-633P-201ENST00000362612 103 ntBASIC-6.46□□□□□ -3.44
TFF3Q07654 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-6.47□□□□□ -3.45
TFF3Q07654 RNU6-1211P-201ENST00000459179 105 ntBASIC-6.47□□□□□ -3.45
TFF3Q07654 RNU6-460P-201ENST00000391158 108 ntBASIC-6.48□□□□□ -3.45
TFF3Q07654 MIR4484-201ENST00000582855 83 ntBASIC-6.48□□□□□ -3.45
TFF3Q07654 MTND5P22-201ENST00000458380 195 ntBASIC-6.49□□□□□ -3.45
TFF3Q07654 RNU6-450P-201ENST00000364654 107 ntBASIC-6.51□□□□□ -3.45
TFF3Q07654 RNU6-259P-201ENST00000383999 107 ntBASIC-6.52□□□□□ -3.45
TFF3Q07654 MIR545-201ENST00000385085 106 ntBASIC-6.52□□□□□ -3.45
TFF3Q07654 RNU6-904P-201ENST00000516206 101 ntBASIC-6.52□□□□□ -3.45
TFF3Q07654 RNU6-122P-201ENST00000516818 107 ntBASIC-6.52□□□□□ -3.45
TFF3Q07654 AL117187.1-201ENST00000555482 181 ntBASIC-6.52□□□□□ -3.45
TFF3Q07654 Y_RNA.219-201ENST00000364232 113 ntBASIC-6.53□□□□□ -3.45
TFF3Q07654 RNU6-1042P-201ENST00000384204 107 ntBASIC-6.53□□□□□ -3.45
TFF3Q07654 AP001340.1-201ENST00000624405 217 ntBASIC-6.53□□□□□ -3.45
TFF3Q07654 Y_RNA.26-201ENST00000362539 101 ntBASIC-6.54□□□□□ -3.46
TFF3Q07654 RNU7-61P-201ENST00000515897 61 ntBASIC-6.54□□□□□ -3.46
TFF3Q07654 DLEU2_1.1-201ENST00000612089 120 ntBASIC-6.54□□□□□ -3.46
TFF3Q07654 RNU6-823P-201ENST00000391042 103 ntBASIC-6.55□□□□□ -3.46
TFF3Q07654 RNU6-380P-201ENST00000410207 107 ntBASIC-6.55□□□□□ -3.46
TFF3Q07654 RNU6-956P-201ENST00000458868 103 ntBASIC-6.55□□□□□ -3.46
TFF3Q07654 MIR4643-201ENST00000577473 78 ntBASIC-6.55□□□□□ -3.46
TFF3Q07654 RNU6-895P-201ENST00000384125 103 ntBASIC-6.57□□□□□ -3.46
TFF3Q07654 MTND2P23-201ENST00000422990 651 ntBASIC-6.57□□□□□ -3.46
TFF3Q07654 RNU7-30P-201ENST00000516835 62 ntBASIC-6.57□□□□□ -3.46
TFF3Q07654 RNU6-1015P-201ENST00000517121 99 ntBASIC-6.57□□□□□ -3.46
TFF3Q07654 Y_RNA.722-201ENST00000517279 114 ntBASIC-6.58□□□□□ -3.46
TFF3Q07654 RNU6-776P-201ENST00000364403 104 ntBASIC-6.59□□□□□ -3.46
TFF3Q07654 RNU6-1022P-201ENST00000365049 104 ntBASIC-6.59□□□□□ -3.46
TFF3Q07654 Y_RNA.565-201ENST00000384719 101 ntBASIC-6.59□□□□□ -3.46
TFF3Q07654 Y_RNA.586-201ENST00000391146 98 ntBASIC-6.59□□□□□ -3.46
TFF3Q07654 MIR4801-201ENST00000582704 82 ntBASIC-6.59□□□□□ -3.46
TFF3Q07654 Y_RNA.632-201ENST00000459189 102 ntBASIC-6.61□□□□□ -3.47
TFF3Q07654 RNU6-1219P-201ENST00000516143 112 ntBASIC-6.61□□□□□ -3.47
TFF3Q07654 RNU6-1061P-201ENST00000516530 99 ntBASIC-6.61□□□□□ -3.47
TFF3Q07654 AC009094.1-201ENST00000564443 426 ntBASIC-6.61□□□□□ -3.47
TFF3Q07654 Y_RNA.259-201ENST00000364619 101 ntBASIC-6.62□□□□□ -3.47
TFF3Q07654 U7.3-201ENST00000616123 62 ntBASIC-6.62□□□□□ -3.47
TFF3Q07654 RNY4P14-201ENST00000363656 96 ntBASIC-6.63□□□□□ -3.47
TFF3Q07654 Y_RNA.187-201ENST00000363918 113 ntBASIC-6.63□□□□□ -3.47
TFF3Q07654 RNU6-1227P-201ENST00000383981 107 ntBASIC-6.63□□□□□ -3.47
TFF3Q07654 MIR664A-201ENST00000626086 82 ntBASIC-6.63□□□□□ -3.47
TFF3Q07654 RNU6-1255P-201ENST00000363434 112 ntBASIC-6.64□□□□□ -3.47
TFF3Q07654 Y_RNA.645-201ENST00000391229 102 ntBASIC-6.64□□□□□ -3.47
TFF3Q07654 MIR4668-201ENST00000582284 70 ntBASIC-6.64□□□□□ -3.47
TFF3Q07654 RNU7-152P-201ENST00000458982 64 ntBASIC-6.65□□□□□ -3.47
TFF3Q07654 SNORD11.1-201ENST00000459482 85 ntBASIC-6.65□□□□□ -3.47
TFF3Q07654 RNU6-979P-201ENST00000383896 107 ntBASIC-6.66□□□□□ -3.48
TFF3Q07654 SNORD116-29-201ENST00000384516 83 ntBASIC-6.66□□□□□ -3.48
TFF3Q07654 U7.2-201ENST00000607576 63 ntBASIC-6.66□□□□□ -3.48
TFF3Q07654 U6atac.1-201ENST00000616025 117 ntBASIC-6.66□□□□□ -3.48
TFF3Q07654 AC113139.1-201ENST00000605049 239 ntBASIC-6.67□□□□□ -3.48
TFF3Q07654 RNU6-918P-201ENST00000391219 106 ntBASIC-6.68□□□□□ -3.48
TFF3Q07654 Y_RNA.573-201ENST00000384763 105 ntBASIC-6.7□□□□□ -3.48
TFF3Q07654 MIR548H4-201ENST00000408689 111 ntBASIC-6.7□□□□□ -3.48
TFF3Q07654 MTND4LP32-201ENST00000636111 270 ntBASIC-6.7□□□□□ -3.48
TFF3Q07654 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-6.71□□□□□ -3.48
TFF3Q07654 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-6.71□□□□□ -3.48
TFF3Q07654 SNORA25.5-201ENST00000363782 126 ntBASIC-6.72□□□□□ -3.49
TFF3Q07654 MIR154-201ENST00000385243 84 ntBASIC-6.72□□□□□ -3.49
TFF3Q07654 Y_RNA.626-201ENST00000411288 95 ntBASIC-6.72□□□□□ -3.49
TFF3Q07654 MIR3611-201ENST00000584484 83 ntBASIC-6.73□□□□□ -3.49
TFF3Q07654 SCARNA15.1-201ENST00000516384 125 ntBASIC-6.74□□□□□ -3.49
TFF3Q07654 SNORA81.3-201ENST00000517283 198 ntBASIC-6.74□□□□□ -3.49
TFF3Q07654 RNU6-379P-201ENST00000363813 104 ntBASIC-6.76□□□□□ -3.49
TFF3Q07654 Y_RNA.107-201ENST00000363190 121 ntBASIC-6.77□□□□□ -3.49
TFF3Q07654 DEFB108C-201ENST00000400154 252 ntBASIC-6.77□□□□□ -3.49
TFF3Q07654 RNU6-988P-201ENST00000519081 107 ntBASIC-6.77□□□□□ -3.49
TFF3Q07654 RNU6-497P-201ENST00000365316 104 ntBASIC-6.78□□□□□ -3.49
TFF3Q07654 Y_RNA.387-201ENST00000383918 102 ntBASIC-6.78□□□□□ -3.49
TFF3Q07654 AC090582.1-201ENST00000636321 199 ntBASIC-6.78□□□□□ -3.49
TFF3Q07654 Y_RNA.210-201ENST00000364161 110 ntBASIC-6.79□□□□□ -3.5
TFF3Q07654 RNU6-1326P-201ENST00000391262 107 ntBASIC-6.8□□□□□ -3.5
TFF3Q07654 Y_RNA.620-201ENST00000411009 88 ntBASIC-6.8□□□□□ -3.5
TFF3Q07654 MIR548X-201ENST00000580069 75 ntBASIC-6.8□□□□□ -3.5
TFF3Q07654 Y_RNA.93-201ENST00000363066 109 ntBASIC-6.81□□□□□ -3.5
TFF3Q07654 Y_RNA.277-201ENST00000364754 102 ntBASIC-6.81□□□□□ -3.5
TFF3Q07654 Y_RNA.553-201ENST00000384670 102 ntBASIC-6.82□□□□□ -3.5
TFF3Q07654 AC139792.2-201ENST00000624218 587 ntBASIC-6.82□□□□□ -3.5
TFF3Q07654 AL157777.2-201ENST00000258070 137 ntBASIC-6.83□□□□□ -3.5
TFF3Q07654 SNORD116-4-201ENST00000384733 96 ntBASIC-6.83□□□□□ -3.5
TFF3Q07654 RNU6-772P-201ENST00000516042 105 ntBASIC-6.86□□□□□ -3.51
TFF3Q07654 Y_RNA.459-201ENST00000384251 102 ntBASIC-6.87□□□□□ -3.51
TFF3Q07654 RNU6-1135P-201ENST00000411083 103 ntBASIC-6.87□□□□□ -3.51
TFF3Q07654 MIR548BB-201ENST00000626714 66 ntBASIC-6.88□□□□□ -3.51
TFF3Q07654 Y_RNA.345-201ENST00000365384 92 ntBASIC-6.89□□□□□ -3.51
TFF3Q07654 RNU6-314P-201ENST00000516574 104 ntBASIC-6.89□□□□□ -3.51
TFF3Q07654 RNU6-315P-201ENST00000362666 107 ntBASIC-6.9□□□□□ -3.51
Retrieved 100 of 98,524 protein–RNA pairs in 269 ms