Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU6-823P-201ENST00000391042 103 ntBASIC-2.57□□□□□ -2.82
HTTP42858 SNORD127-201ENST00000458892 86 ntBASIC-2.57□□□□□ -2.82
HTTP42858 DLEU2_1.1-201ENST00000612089 120 ntBASIC-2.57□□□□□ -2.82
HTTP42858 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.59□□□□□ -2.82
HTTP42858 MIR545-201ENST00000385085 106 ntBASIC-2.59□□□□□ -2.82
HTTP42858 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.59□□□□□ -2.82
HTTP42858 RNY3P15-201ENST00000516297 97 ntBASIC-2.59□□□□□ -2.82
HTTP42858 MIR4668-201ENST00000582284 70 ntBASIC-2.59□□□□□ -2.82
HTTP42858 RNU6-836P-201ENST00000362920 107 ntBASIC-2.6□□□□□ -2.83
HTTP42858 RNU6-876P-201ENST00000391295 104 ntBASIC-2.61□□□□□ -2.83
HTTP42858 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.61□□□□□ -2.83
HTTP42858 MIR5690-201ENST00000583739 73 ntBASIC-2.61□□□□□ -2.83
HTTP42858 MTATP8P2-201ENST00000435212 202 ntBASIC-2.61□□□□□ -2.83
HTTP42858 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.61□□□□□ -2.83
HTTP42858 MIR8062-201ENST00000621515 85 ntBASIC-2.61□□□□□ -2.83
HTTP42858 SNORD116-29-201ENST00000384516 83 ntBASIC-2.62□□□□□ -2.83
HTTP42858 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.63□□□□□ -2.83
HTTP42858 RNU6-904P-201ENST00000516206 101 ntBASIC-2.63□□□□□ -2.83
HTTP42858 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.63□□□□□ -2.83
HTTP42858 Y_RNA.553-201ENST00000384670 102 ntBASIC-2.63□□□□□ -2.83
HTTP42858 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-277P-201ENST00000516272 106 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-659P-201ENST00000516454 104 ntBASIC-2.64□□□□□ -2.83
HTTP42858 U7.2-201ENST00000607576 63 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-1042P-201ENST00000384204 107 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-574P-201ENST00000384265 107 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU7-152P-201ENST00000458982 64 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-314P-201ENST00000516574 104 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-633P-201ENST00000362612 103 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-275P-201ENST00000364910 107 ntBASIC-2.64□□□□□ -2.83
HTTP42858 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.64□□□□□ -2.83
HTTP42858 Y_RNA.693-201ENST00000516641 110 ntBASIC-2.64□□□□□ -2.83
HTTP42858 AP001340.1-201ENST00000624405 217 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.65□□□□□ -2.83
HTTP42858 RNU6-411P-201ENST00000384451 107 ntBASIC-2.65□□□□□ -2.83
HTTP42858 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.66□□□□□ -2.83
HTTP42858 MIR4282-201ENST00000583613 67 ntBASIC-2.66□□□□□ -2.84
HTTP42858 DEFB108C-201ENST00000400154 252 ntBASIC-2.66□□□□□ -2.84
HTTP42858 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.66□□□□□ -2.84
HTTP42858 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.67□□□□□ -2.84
HTTP42858 SNORD116-24-201ENST00000384549 92 ntBASIC-2.67□□□□□ -2.84
HTTP42858 MTND4P17-201ENST00000470444 350 ntBASIC-2.67□□□□□ -2.84
HTTP42858 MIR548X-201ENST00000580069 75 ntBASIC-2.67□□□□□ -2.84
HTTP42858 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.68□□□□□ -2.84
HTTP42858 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.68□□□□□ -2.84
HTTP42858 RNU6-918P-201ENST00000391219 106 ntBASIC-2.68□□□□□ -2.84
HTTP42858 Y_RNA.635-201ENST00000459041 101 ntBASIC-2.68□□□□□ -2.84
HTTP42858 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.68□□□□□ -2.84
HTTP42858 MIR1252-201ENST00000408861 65 ntBASIC-2.68□□□□□ -2.84
HTTP42858 RNU6-988P-201ENST00000519081 107 ntBASIC-2.68□□□□□ -2.84
HTTP42858 AL117187.1-201ENST00000555482 181 ntBASIC-2.68□□□□□ -2.84
HTTP42858 MIR3611-201ENST00000584484 83 ntBASIC-2.68□□□□□ -2.84
HTTP42858 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.69□□□□□ -2.84
HTTP42858 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.69□□□□□ -2.84
HTTP42858 RNU4-14P-201ENST00000410858 122 ntBASIC-2.69□□□□□ -2.84
HTTP42858 MIR1302-11-201ENST00000408051 138 ntBASIC-2.7□□□□□ -2.84
HTTP42858 MIR1302-9-201ENST00000408365 138 ntBASIC-2.7□□□□□ -2.84
HTTP42858 MIR1302-10-201ENST00000408734 138 ntBASIC-2.7□□□□□ -2.84
HTTP42858 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.7□□□□□ -2.84
HTTP42858 MIR1302-2-201ENST00000607096 138 ntBASIC-2.7□□□□□ -2.84
HTTP42858 U2.14-201ENST00000615943 113 ntBASIC-2.7□□□□□ -2.84
HTTP42858 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.71□□□□□ -2.84
HTTP42858 AL158147.1-201ENST00000443970 75 ntBASIC-2.71□□□□□ -2.84
HTTP42858 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.71□□□□□ -2.84
HTTP42858 RNU6-979P-201ENST00000383896 107 ntBASIC-2.71□□□□□ -2.84
HTTP42858 AC006160.2-201ENST00000637708 154 ntBASIC-2.71□□□□□ -2.84
HTTP42858 AC006362.1-201ENST00000567392 174 ntBASIC-2.72□□□□□ -2.85
HTTP42858 MIR2052-201ENST00000636055 55 ntBASIC-2.72□□□□□ -2.85
HTTP42858 RNU6-797P-201ENST00000363101 109 ntBASIC-2.73□□□□□ -2.85
HTTP42858 RNU6-379P-201ENST00000363813 104 ntBASIC-2.73□□□□□ -2.85
HTTP42858 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.73□□□□□ -2.85
HTTP42858 SNORD58C-201ENST00000365223 64 ntBASIC-2.73□□□□□ -2.85
HTTP42858 AC009094.1-201ENST00000564443 426 ntBASIC-2.73□□□□□ -2.85
HTTP42858 MIR4643-201ENST00000577473 78 ntBASIC-2.73□□□□□ -2.85
HTTP42858 RNU6-380P-201ENST00000410207 107 ntBASIC-2.73□□□□□ -2.85
HTTP42858 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.74□□□□□ -2.85
HTTP42858 SNORA40.4-201ENST00000390971 128 ntBASIC-2.74□□□□□ -2.85
HTTP42858 U7.3-201ENST00000616123 62 ntBASIC-2.74□□□□□ -2.85
HTTP42858 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.74□□□□□ -2.85
HTTP42858 SNORD116-22-201ENST00000384430 92 ntBASIC-2.74□□□□□ -2.85
HTTP42858 RNU4-71P-201ENST00000516258 113 ntBASIC-2.74□□□□□ -2.85
HTTP42858 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.74□□□□□ -2.85
HTTP42858 RNU6-915P-201ENST00000364943 103 ntBASIC-2.75□□□□□ -2.85
HTTP42858 MTND4LP32-201ENST00000636111 270 ntBASIC-2.75□□□□□ -2.85
HTTP42858 Y_RNA.554-201ENST00000384672 102 ntBASIC-2.75□□□□□ -2.85
HTTP42858 AC139792.2-201ENST00000624218 587 ntBASIC-2.75□□□□□ -2.85
HTTP42858 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.75□□□□□ -2.85
HTTP42858 RNU6-895P-201ENST00000384125 103 ntBASIC-2.75□□□□□ -2.85
HTTP42858 MIR548AL-201ENST00000578416 97 ntBASIC-2.75□□□□□ -2.85
HTTP42858 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.76□□□□□ -2.85
HTTP42858 SNORD58.1-201ENST00000391313 66 ntBASIC-2.76□□□□□ -2.85
HTTP42858 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.76□□□□□ -2.85
HTTP42858 AC109635.3-201ENST00000529536 185 ntBASIC-2.76□□□□□ -2.85
HTTP42858 MIR4484-201ENST00000582855 83 ntBASIC-2.76□□□□□ -2.85
HTTP42858 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.77□□□□□ -2.85
HTTP42858 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.77□□□□□ -2.85
HTTP42858 RNU6-772P-201ENST00000516042 105 ntBASIC-2.77□□□□□ -2.85
HTTP42858 SNORD11.1-201ENST00000459482 85 ntBASIC-2.77□□□□□ -2.85
HTTP42858 SNORA19-201ENST00000384737 128 ntBASIC-2.78□□□□□ -2.85
HTTP42858 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.78□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms