Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MIR1254-1-201ENST00000408257 97 ntBASIC-1.04□□□□□ -2.58
ABCA4P78363 RNU6-300P-201ENST00000459080 104 ntBASIC-1.04□□□□□ -2.58
ABCA4P78363 RNU7-107P-201ENST00000459121 61 ntBASIC-1.04□□□□□ -2.58
ABCA4P78363 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.04□□□□□ -2.58
ABCA4P78363 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 RNU6-604P-201ENST00000390917 100 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 RNU6-587P-201ENST00000391282 106 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 RNU6-172P-201ENST00000411000 93 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 AL450471.1-201ENST00000447509 127 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 RNU6-988P-201ENST00000519081 107 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 MIR548Z-201ENST00000584743 97 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 RNU4-11P-201ENST00000365287 132 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 RN7SKP298-201ENST00000515950 94 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 MIR23C-201ENST00000579846 100 ntBASIC-1.05□□□□□ -2.58
ABCA4P78363 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 MIR545-201ENST00000385085 106 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 SNORA75.5-201ENST00000391291 81 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 SNORD58.1-201ENST00000391313 66 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 SNORD19B-201ENST00000459623 84 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 RNU6-795P-201ENST00000516323 103 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 SNORA40.15-201ENST00000516884 107 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 MIR3144-201ENST00000579460 79 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 AL035470.1-201ENST00000622571 220 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 AC006160.2-201ENST00000637708 154 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 SNORA63-201ENST00000363450 132 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 RNU6-483P-201ENST00000384088 108 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 RNU7-160P-201ENST00000516660 62 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 MIR7110-201ENST00000612638 86 ntBASIC-1.06□□□□□ -2.58
ABCA4P78363 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.07□□□□□ -2.58
ABCA4P78363 RNU6-639P-201ENST00000384074 107 ntBASIC-1.07□□□□□ -2.58
ABCA4P78363 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.07□□□□□ -2.58
ABCA4P78363 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.07□□□□□ -2.58
ABCA4P78363 RNU6-823P-201ENST00000391042 103 ntBASIC-1.07□□□□□ -2.58
ABCA4P78363 MIR4668-201ENST00000582284 70 ntBASIC-1.07□□□□□ -2.58
ABCA4P78363 AC072026.1-201ENST00000605023 201 ntBASIC-1.07□□□□□ -2.58
ABCA4P78363 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.07□□□□□ -2.58
ABCA4P78363 SNORD113-6-201ENST00000363345 75 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 RNU6-574P-201ENST00000384265 107 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 MIR1263-201ENST00000408324 86 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 SNORD11.1-201ENST00000459482 85 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 RNU6-162P-201ENST00000516228 103 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 RNU6-542P-201ENST00000516405 103 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 RNU6-267P-201ENST00000516714 103 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 RNU6-742P-201ENST00000365289 107 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 RNU6-665P-201ENST00000384639 107 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 RNU6-813P-201ENST00000384691 107 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 RNY3P16-201ENST00000516338 101 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 MIR4679-2-201ENST00000578358 77 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 MIR4439-201ENST00000583746 80 ntBASIC-1.08□□□□□ -2.58
ABCA4P78363 RNU6-797P-201ENST00000363101 109 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 SNORD116-4-201ENST00000384733 96 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 MIR1302-11-201ENST00000408051 138 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 MIR1302-9-201ENST00000408365 138 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 MIR1302-10-201ENST00000408734 138 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 RNA5SP449-201ENST00000516871 130 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.09□□□□□ -2.58
ABCA4P78363 MIR5690-201ENST00000583739 73 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 MIR1302-2-201ENST00000607096 138 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 AL359920.1-201ENST00000618332 176 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 RNU6-497P-201ENST00000365316 104 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 SNORD116-18-201ENST00000383961 92 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 RNU6-239P-201ENST00000390990 99 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 RNU6-718P-201ENST00000516166 105 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 MIR4680-201ENST00000580906 66 ntBASIC-1.09□□□□□ -2.58
ABCA4P78363 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 RNU6-788P-201ENST00000390967 104 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 AL121914.1-201ENST00000450188 156 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 SNORD116.3-201ENST00000517176 78 ntBASIC-1.1□□□□□ -2.59
ABCA4P78363 U6atac.1-201ENST00000616025 117 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms