Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU6-537P-201ENST00000517277 103 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 RNU7-153P-201ENST00000516455 62 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 RNU6-1314P-201ENST00000517139 104 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 AC090574.1-201ENST00000623186 233 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.26□□□□□ -2.77
VPS13DQ5THJ4 RNU6-604P-201ENST00000390917 100 ntBASIC-2.27□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.682-201ENST00000516457 100 ntBASIC-2.28□□□□□ -2.77
VPS13DQ5THJ4 MIR4272-201ENST00000635924 64 ntBASIC-2.28□□□□□ -2.77
VPS13DQ5THJ4 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.28□□□□□ -2.77
VPS13DQ5THJ4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.28□□□□□ -2.77
VPS13DQ5THJ4 RNU2-72P-201ENST00000411175 163 ntBASIC-2.28□□□□□ -2.77
VPS13DQ5THJ4 RNU6-566P-201ENST00000516790 107 ntBASIC-2.28□□□□□ -2.77
VPS13DQ5THJ4 AP003461.1-201ENST00000528866 78 ntBASIC-2.28□□□□□ -2.77
VPS13DQ5THJ4 U2.1-201ENST00000618978 145 ntBASIC-2.28□□□□□ -2.77
VPS13DQ5THJ4 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.28□□□□□ -2.77
VPS13DQ5THJ4 Z99129.1-201ENST00000612510 255 ntBASIC-2.28□□□□□ -2.77
VPS13DQ5THJ4 RNU6-290P-201ENST00000365212 101 ntBASIC-2.28□□□□□ -2.78
VPS13DQ5THJ4 RNU4-11P-201ENST00000365287 132 ntBASIC-2.28□□□□□ -2.78
VPS13DQ5THJ4 RNU6-1068P-201ENST00000410958 103 ntBASIC-2.28□□□□□ -2.78
VPS13DQ5THJ4 MIR6863-201ENST00000636112 90 ntBASIC-2.28□□□□□ -2.78
VPS13DQ5THJ4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.29□□□□□ -2.78
VPS13DQ5THJ4 SNORD60.1-201ENST00000362451 73 ntBASIC-2.29□□□□□ -2.78
VPS13DQ5THJ4 RNU6-788P-201ENST00000390967 104 ntBASIC-2.29□□□□□ -2.78
VPS13DQ5THJ4 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.29□□□□□ -2.78
VPS13DQ5THJ4 AC130289.1-201ENST00000577321 73 ntBASIC-2.29□□□□□ -2.78
VPS13DQ5THJ4 MIR4679-2-201ENST00000578358 77 ntBASIC-2.29□□□□□ -2.78
VPS13DQ5THJ4 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.3□□□□□ -2.78
VPS13DQ5THJ4 Y_RNA.339-201ENST00000365325 102 ntBASIC-2.3□□□□□ -2.78
VPS13DQ5THJ4 MIR3121-201ENST00000579680 77 ntBASIC-2.3□□□□□ -2.78
VPS13DQ5THJ4 RNY3P2-201ENST00000362918 102 ntBASIC-2.3□□□□□ -2.78
VPS13DQ5THJ4 RNU6-937P-201ENST00000384325 106 ntBASIC-2.3□□□□□ -2.78
VPS13DQ5THJ4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.3□□□□□ -2.78
VPS13DQ5THJ4 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.3□□□□□ -2.78
VPS13DQ5THJ4 MIR4694-201ENST00000578534 80 ntBASIC-2.3□□□□□ -2.78
VPS13DQ5THJ4 Y_RNA.201-201ENST00000364052 96 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 SNORA75.5-201ENST00000391291 81 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 Y_RNA.594-201ENST00000410373 140 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 AC080013.6-201ENST00000606185 215 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 SEPT14P3-201ENST00000439401 183 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 AL732372.2-207ENST00000445840 183 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 SEPT14P2-201ENST00000453405 183 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 RNU7-169P-201ENST00000459456 61 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 FO082796.1-201ENST00000523795 183 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 RNU4-40P-201ENST00000364351 143 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 SNORA63.7-201ENST00000365579 123 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 RNU6-906P-201ENST00000384700 70 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 RNA5SP449-201ENST00000516871 130 ntBASIC-2.31□□□□□ -2.78
VPS13DQ5THJ4 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 RNU4-85P-201ENST00000364675 123 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 MIR548D2-201ENST00000384955 97 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 RNU6-381P-201ENST00000391259 108 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 SNORD81.2-201ENST00000365153 76 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 AC096644.2-201ENST00000429278 159 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 RNU6-419P-201ENST00000517030 63 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 SNORD113.1-201ENST00000363280 73 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 MIR514A2-201ENST00000385131 88 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 MIR514A3-201ENST00000385132 88 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 MTCO2P19-201ENST00000427513 598 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 MTND3P10-201ENST00000450967 341 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 RNU6-542P-201ENST00000516405 103 ntBASIC-2.32□□□□□ -2.78
VPS13DQ5THJ4 AC093729.1-201ENST00000513074 128 ntBASIC-2.33□□□□□ -2.78
VPS13DQ5THJ4 RPS29P30-201ENST00000600975 111 ntBASIC-2.33□□□□□ -2.78
VPS13DQ5THJ4 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.33□□□□□ -2.78
VPS13DQ5THJ4 SNORA8.1-201ENST00000384250 140 ntBASIC-2.33□□□□□ -2.78
VPS13DQ5THJ4 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.33□□□□□ -2.78
VPS13DQ5THJ4 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.34□□□□□ -2.78
VPS13DQ5THJ4 U6atac.1-201ENST00000616025 117 ntBASIC-2.34□□□□□ -2.78
VPS13DQ5THJ4 AL603755.1-201ENST00000619504 163 ntBASIC-2.34□□□□□ -2.78
VPS13DQ5THJ4 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.34□□□□□ -2.78
VPS13DQ5THJ4 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.34□□□□□ -2.78
VPS13DQ5THJ4 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.34□□□□□ -2.78
VPS13DQ5THJ4 RNU6-639P-201ENST00000384074 107 ntBASIC-2.35□□□□□ -2.78
VPS13DQ5THJ4 RNY3P10-201ENST00000384764 102 ntBASIC-2.35□□□□□ -2.78
VPS13DQ5THJ4 RNU6-231P-201ENST00000517122 103 ntBASIC-2.35□□□□□ -2.78
VPS13DQ5THJ4 AC138305.3-201ENST00000624988 240 ntBASIC-2.35□□□□□ -2.78
VPS13DQ5THJ4 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.35□□□□□ -2.79
VPS13DQ5THJ4 MIR3613-201ENST00000579844 87 ntBASIC-2.35□□□□□ -2.79
VPS13DQ5THJ4 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.35□□□□□ -2.79
VPS13DQ5THJ4 MIR548AH-201ENST00000637109 76 ntBASIC-2.35□□□□□ -2.79
VPS13DQ5THJ4 RNU6-196P-201ENST00000384315 107 ntBASIC-2.36□□□□□ -2.79
VPS13DQ5THJ4 RNU6-330P-201ENST00000363015 107 ntBASIC-2.36□□□□□ -2.79
VPS13DQ5THJ4 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.36□□□□□ -2.79
VPS13DQ5THJ4 RNU6-326P-201ENST00000365480 107 ntBASIC-2.36□□□□□ -2.79
VPS13DQ5THJ4 SNORD116-6-201ENST00000384711 96 ntBASIC-2.36□□□□□ -2.79
VPS13DQ5THJ4 RNU6-836P-201ENST00000362920 107 ntBASIC-2.36□□□□□ -2.79
VPS13DQ5THJ4 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.36□□□□□ -2.79
VPS13DQ5THJ4 RNU6-768P-201ENST00000384683 107 ntBASIC-2.36□□□□□ -2.79
VPS13DQ5THJ4 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.36□□□□□ -2.79
VPS13DQ5THJ4 MIR519C-201ENST00000385053 87 ntBASIC-2.37□□□□□ -2.79
VPS13DQ5THJ4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-2.37□□□□□ -2.79
VPS13DQ5THJ4 SNORD45C-201ENST00000383893 79 ntBASIC-2.37□□□□□ -2.79
VPS13DQ5THJ4 SNORA40B-201ENST00000385573 128 ntBASIC-2.37□□□□□ -2.79
VPS13DQ5THJ4 MIR1263-201ENST00000408324 86 ntBASIC-2.37□□□□□ -2.79
VPS13DQ5THJ4 MIR548P-201ENST00000408336 84 ntBASIC-2.37□□□□□ -2.79
VPS13DQ5THJ4 RNU7-121P-201ENST00000516604 62 ntBASIC-2.37□□□□□ -2.79
VPS13DQ5THJ4 MIR6844-201ENST00000637122 62 ntBASIC-2.37□□□□□ -2.79
VPS13DQ5THJ4 RNU6-130P-201ENST00000411112 103 ntBASIC-2.37□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms