Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU7-74P-201ENST00000459104 62 ntBASIC0.59□□□□□ -2.31
HOXC13P31276 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.59□□□□□ -2.31
HOXC13P31276 RNU6-135P-201ENST00000516769 101 ntBASIC0.59□□□□□ -2.31
HOXC13P31276 MIR330-201ENST00000362196 94 ntBASIC0.58□□□□□ -2.32
HOXC13P31276 RNA5SP257-201ENST00000363023 116 ntBASIC0.58□□□□□ -2.32
HOXC13P31276 RNU6-645P-201ENST00000364649 106 ntBASIC0.58□□□□□ -2.32
HOXC13P31276 MT-TY-201ENST00000387409 66 ntBASIC0.58□□□□□ -2.32
HOXC13P31276 snoU13.13-201ENST00000458842 104 ntBASIC0.58□□□□□ -2.32
HOXC13P31276 RNA5SP484-201ENST00000458857 111 ntBASIC0.58□□□□□ -2.32
HOXC13P31276 MIR4511-201ENST00000582784 87 ntBASIC0.58□□□□□ -2.32
HOXC13P31276 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
HOXC13P31276 Y_RNA.68-201ENST00000362881 102 ntBASIC0.57□□□□□ -2.32
HOXC13P31276 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
HOXC13P31276 SNORA40.17-201ENST00000517256 115 ntBASIC0.57□□□□□ -2.32
HOXC13P31276 AC073869.9-201ENST00000641610 120 ntBASIC0.57□□□□□ -2.32
HOXC13P31276 MIR18A-201ENST00000362310 71 ntBASIC0.56□□□□□ -2.32
HOXC13P31276 MTND4LP19-201ENST00000403051 166 ntBASIC0.56□□□□□ -2.32
HOXC13P31276 RNA5SP227-201ENST00000516184 113 ntBASIC0.56□□□□□ -2.32
HOXC13P31276 SCARNA16.5-201ENST00000517114 183 ntBASIC0.56□□□□□ -2.32
HOXC13P31276 AC069503.3-201ENST00000618674 145 ntBASIC0.56□□□□□ -2.32
HOXC13P31276 AC103706.3-201ENST00000636297 85 ntBASIC0.56□□□□□ -2.32
HOXC13P31276 SNORA36.1-201ENST00000363424 132 ntBASIC0.55□□□□□ -2.32
HOXC13P31276 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
HOXC13P31276 MIR548C-201ENST00000384815 97 ntBASIC0.55□□□□□ -2.32
HOXC13P31276 AC110620.1-201ENST00000416042 228 ntBASIC0.55□□□□□ -2.32
HOXC13P31276 RNU6-656P-201ENST00000516785 107 ntBASIC0.55□□□□□ -2.32
HOXC13P31276 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.55□□□□□ -2.32
HOXC13P31276 AC092634.7-201ENST00000621022 103 ntBASIC0.55□□□□□ -2.32
HOXC13P31276 SNORA2.1-201ENST00000363089 137 ntBASIC0.54□□□□□ -2.32
HOXC13P31276 RNU6-499P-201ENST00000365615 107 ntBASIC0.54□□□□□ -2.32
HOXC13P31276 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
HOXC13P31276 MIR633-201ENST00000384821 98 ntBASIC0.54□□□□□ -2.32
HOXC13P31276 RNA5SP268-201ENST00000516828 124 ntBASIC0.54□□□□□ -2.32
HOXC13P31276 MIR4752-201ENST00000579672 72 ntBASIC0.54□□□□□ -2.32
HOXC13P31276 MIR4473-201ENST00000583731 91 ntBASIC0.54□□□□□ -2.32
HOXC13P31276 MIR548V-201ENST00000584165 80 ntBASIC0.54□□□□□ -2.32
HOXC13P31276 AL162376.1-201ENST00000624117 175 ntBASIC0.54□□□□□ -2.32
HOXC13P31276 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.54□□□□□ -2.32
HOXC13P31276 RNY1P8-201ENST00000383970 114 ntBASIC0.53□□□□□ -2.32
HOXC13P31276 MIR652-201ENST00000385278 98 ntBASIC0.53□□□□□ -2.32
HOXC13P31276 RNA5SP299-201ENST00000391203 116 ntBASIC0.53□□□□□ -2.32
HOXC13P31276 AC006210.1-201ENST00000424882 111 ntBASIC0.53□□□□□ -2.32
HOXC13P31276 RNU6-542P-201ENST00000516405 103 ntBASIC0.53□□□□□ -2.32
HOXC13P31276 MIR548AE1-201ENST00000583292 70 ntBASIC0.53□□□□□ -2.32
HOXC13P31276 SNORD114-4-201ENST00000363962 75 ntBASIC0.52□□□□□ -2.33
HOXC13P31276 RNA5SP192-201ENST00000364404 120 ntBASIC0.52□□□□□ -2.33
HOXC13P31276 Y_RNA.375-201ENST00000365625 101 ntBASIC0.52□□□□□ -2.33
HOXC13P31276 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
HOXC13P31276 SNORD110-201ENST00000408189 75 ntBASIC0.52□□□□□ -2.33
HOXC13P31276 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
HOXC13P31276 RNU6-1089P-201ENST00000516473 104 ntBASIC0.52□□□□□ -2.33
HOXC13P31276 RNA5SP94-201ENST00000516917 108 ntBASIC0.52□□□□□ -2.33
HOXC13P31276 MIR7107-201ENST00000611489 80 ntBASIC0.52□□□□□ -2.33
HOXC13P31276 MIR6739-201ENST00000622461 75 ntBASIC0.52□□□□□ -2.33
HOXC13P31276 MIR6828-201ENST00000636181 60 ntBASIC0.52□□□□□ -2.33
HOXC13P31276 RNA5SP62-201ENST00000363457 110 ntBASIC0.51□□□□□ -2.33
HOXC13P31276 RNU4-45P-201ENST00000365469 141 ntBASIC0.51□□□□□ -2.33
HOXC13P31276 Y_RNA.407-201ENST00000383986 113 ntBASIC0.51□□□□□ -2.33
HOXC13P31276 RNU6-1162P-201ENST00000384443 104 ntBASIC0.51□□□□□ -2.33
HOXC13P31276 MIR630-201ENST00000384957 97 ntBASIC0.51□□□□□ -2.33
HOXC13P31276 MIR140-201ENST00000385282 100 ntBASIC0.51□□□□□ -2.33
HOXC13P31276 AC021146.9-201ENST00000512503 156 ntBASIC0.51□□□□□ -2.33
HOXC13P31276 MIR4514-201ENST00000581410 57 ntBASIC0.51□□□□□ -2.33
HOXC13P31276 SNORA70.25-201ENST00000612741 95 ntBASIC0.51□□□□□ -2.33
HOXC13P31276 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
HOXC13P31276 SNORA25.5-201ENST00000363782 126 ntBASIC0.5□□□□□ -2.33
HOXC13P31276 MIR582-201ENST00000365731 98 ntBASIC0.5□□□□□ -2.33
HOXC13P31276 SCARNA21.1-201ENST00000515996 128 ntBASIC0.5□□□□□ -2.33
HOXC13P31276 SCARNA17.3-201ENST00000516381 125 ntBASIC0.5□□□□□ -2.33
HOXC13P31276 RNU6-1079P-201ENST00000362861 110 ntBASIC0.49□□□□□ -2.33
HOXC13P31276 SNORA33.1-201ENST00000364957 130 ntBASIC0.49□□□□□ -2.33
HOXC13P31276 MIR521-2-201ENST00000384818 87 ntBASIC0.49□□□□□ -2.33
HOXC13P31276 SNORA75.1-201ENST00000391130 148 ntBASIC0.49□□□□□ -2.33
HOXC13P31276 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.49□□□□□ -2.33
HOXC13P31276 AC069271.1-201ENST00000445577 156 ntBASIC0.49□□□□□ -2.33
HOXC13P31276 MIR466-201ENST00000580653 84 ntBASIC0.49□□□□□ -2.33
HOXC13P31276 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
HOXC13P31276 RNA5SP215-201ENST00000363440 122 ntBASIC0.48□□□□□ -2.33
HOXC13P31276 RNA5SP517-201ENST00000364724 117 ntBASIC0.48□□□□□ -2.33
HOXC13P31276 RNU6-987P-201ENST00000384759 104 ntBASIC0.48□□□□□ -2.33
HOXC13P31276 RNU4-37P-201ENST00000410214 84 ntBASIC0.48□□□□□ -2.33
HOXC13P31276 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
HOXC13P31276 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
HOXC13P31276 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.48□□□□□ -2.33
HOXC13P31276 RNU6-829P-201ENST00000363700 112 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 Y_RNA.250-201ENST00000364542 110 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 SNORA63.6-201ENST00000364921 119 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 RNU6-669P-201ENST00000365575 107 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 RNU6-614P-201ENST00000384369 107 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 MIR548E-201ENST00000408287 88 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 HMGN2P22-201ENST00000427588 175 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 AC079150.2-201ENST00000443733 78 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 RNA5SP476-201ENST00000516613 103 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 AC243829.6-201ENST00000612652 106 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 U6.59-201ENST00000615686 107 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 uc_338.10-201ENST00000621872 182 ntBASIC0.47□□□□□ -2.33
HOXC13P31276 Y_RNA.125-201ENST00000363371 111 ntBASIC0.46□□□□□ -2.34
HOXC13P31276 RNU6-940P-201ENST00000363433 104 ntBASIC0.46□□□□□ -2.34
HOXC13P31276 Y_RNA.423-201ENST00000384057 113 ntBASIC0.46□□□□□ -2.34
HOXC13P31276 SNORA15B-2-201ENST00000384058 135 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 249.1 ms