Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RNU6-634P-201ENST00000459134 106 ntBASIC0.61□□□□□ -2.31
TOP3BO95985 MIR4752-201ENST00000579672 72 ntBASIC0.61□□□□□ -2.31
TOP3BO95985 MIR4514-201ENST00000581410 57 ntBASIC0.61□□□□□ -2.31
TOP3BO95985 SNORD45.1-201ENST00000363181 77 ntBASIC0.6□□□□□ -2.31
TOP3BO95985 SNORD110-201ENST00000408189 75 ntBASIC0.6□□□□□ -2.31
TOP3BO95985 Z95118.1-201ENST00000421372 247 ntBASIC0.6□□□□□ -2.31
TOP3BO95985 AC069271.1-201ENST00000445577 156 ntBASIC0.6□□□□□ -2.31
TOP3BO95985 SNORA70.25-201ENST00000612741 95 ntBASIC0.6□□□□□ -2.31
TOP3BO95985 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
TOP3BO95985 SNORD118-201ENST00000363593 134 ntBASIC0.59□□□□□ -2.31
TOP3BO95985 SNORD115-31-201ENST00000365318 82 ntBASIC0.59□□□□□ -2.31
TOP3BO95985 MIR203A-201ENST00000384836 110 ntBASIC0.59□□□□□ -2.31
TOP3BO95985 RNU6-604P-201ENST00000390917 100 ntBASIC0.59□□□□□ -2.31
TOP3BO95985 SNORA40.8-201ENST00000411034 126 ntBASIC0.59□□□□□ -2.31
TOP3BO95985 RNU1-29P-201ENST00000606574 126 ntBASIC0.59□□□□□ -2.31
TOP3BO95985 MIR6759-201ENST00000638110 65 ntBASIC0.59□□□□□ -2.31
TOP3BO95985 SNORD115-22-201ENST00000364456 82 ntBASIC0.58□□□□□ -2.32
TOP3BO95985 AC114801.3-201ENST00000510231 177 ntBASIC0.58□□□□□ -2.32
TOP3BO95985 MIR4636-201ENST00000582271 80 ntBASIC0.58□□□□□ -2.32
TOP3BO95985 MIR4473-201ENST00000583731 91 ntBASIC0.58□□□□□ -2.32
TOP3BO95985 MIR3657-201ENST00000584818 117 ntBASIC0.58□□□□□ -2.32
TOP3BO95985 MIR8053-201ENST00000613344 75 ntBASIC0.58□□□□□ -2.32
TOP3BO95985 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
TOP3BO95985 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
TOP3BO95985 SNORD114-4-201ENST00000363962 75 ntBASIC0.57□□□□□ -2.32
TOP3BO95985 RNU6-990P-201ENST00000364385 104 ntBASIC0.57□□□□□ -2.32
TOP3BO95985 Y_RNA.407-201ENST00000383986 113 ntBASIC0.57□□□□□ -2.32
TOP3BO95985 RNU6-260P-201ENST00000384092 107 ntBASIC0.57□□□□□ -2.32
TOP3BO95985 SNORD45A-201ENST00000384512 84 ntBASIC0.57□□□□□ -2.32
TOP3BO95985 RNU6-30P-201ENST00000384561 107 ntBASIC0.57□□□□□ -2.32
TOP3BO95985 RNU6-540P-201ENST00000384622 101 ntBASIC0.57□□□□□ -2.32
TOP3BO95985 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
TOP3BO95985 SNORD71-201ENST00000411292 86 ntBASIC0.57□□□□□ -2.32
TOP3BO95985 AC139453.2-201ENST00000487255 133 ntBASIC0.57□□□□□ -2.32
TOP3BO95985 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
TOP3BO95985 MIR518A1-201ENST00000385068 85 ntBASIC0.56□□□□□ -2.32
TOP3BO95985 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
TOP3BO95985 MIR548AE1-201ENST00000583292 70 ntBASIC0.56□□□□□ -2.32
TOP3BO95985 AC023932.2-201ENST00000603176 175 ntBASIC0.56□□□□□ -2.32
TOP3BO95985 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
TOP3BO95985 SNORA9.1-201ENST00000362412 131 ntBASIC0.55□□□□□ -2.32
TOP3BO95985 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
TOP3BO95985 RNA5SP25-201ENST00000410815 110 ntBASIC0.55□□□□□ -2.32
TOP3BO95985 HMGN2P22-201ENST00000427588 175 ntBASIC0.55□□□□□ -2.32
TOP3BO95985 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
TOP3BO95985 SNORA40.17-201ENST00000517256 115 ntBASIC0.55□□□□□ -2.32
TOP3BO95985 MIR5589-201ENST00000579442 60 ntBASIC0.55□□□□□ -2.32
TOP3BO95985 MIR5706-201ENST00000579841 80 ntBASIC0.55□□□□□ -2.32
TOP3BO95985 SNORA2.1-201ENST00000363089 137 ntBASIC0.54□□□□□ -2.32
TOP3BO95985 MIR652-201ENST00000385278 98 ntBASIC0.54□□□□□ -2.32
TOP3BO95985 RNU6-539P-201ENST00000516665 103 ntBASIC0.54□□□□□ -2.32
TOP3BO95985 RNU6-881P-201ENST00000516813 102 ntBASIC0.54□□□□□ -2.32
TOP3BO95985 AC243829.6-201ENST00000612652 106 ntBASIC0.54□□□□□ -2.32
TOP3BO95985 SNORD113.1-201ENST00000363280 73 ntBASIC0.53□□□□□ -2.32
TOP3BO95985 SNORD114-15-201ENST00000364687 72 ntBASIC0.53□□□□□ -2.32
TOP3BO95985 RNU6-895P-201ENST00000384125 103 ntBASIC0.53□□□□□ -2.32
TOP3BO95985 RNU6-649P-201ENST00000384463 107 ntBASIC0.53□□□□□ -2.32
TOP3BO95985 SNORD30.1-201ENST00000391309 70 ntBASIC0.53□□□□□ -2.32
TOP3BO95985 SCARNA17.3-201ENST00000516381 125 ntBASIC0.53□□□□□ -2.32
TOP3BO95985 RNA5SP147-201ENST00000516493 109 ntBASIC0.53□□□□□ -2.32
TOP3BO95985 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.52□□□□□ -2.33
TOP3BO95985 SNORA2A-201ENST00000383885 135 ntBASIC0.52□□□□□ -2.33
TOP3BO95985 Y_RNA.423-201ENST00000384057 113 ntBASIC0.52□□□□□ -2.33
TOP3BO95985 RNU6-663P-201ENST00000391105 106 ntBASIC0.52□□□□□ -2.33
TOP3BO95985 RNA5SP98-201ENST00000363158 137 ntBASIC0.51□□□□□ -2.33
TOP3BO95985 Y_RNA.125-201ENST00000363371 111 ntBASIC0.51□□□□□ -2.33
TOP3BO95985 RNU6-982P-201ENST00000516216 102 ntBASIC0.51□□□□□ -2.33
TOP3BO95985 MIR6755-201ENST00000619993 66 ntBASIC0.51□□□□□ -2.33
TOP3BO95985 uc_338.10-201ENST00000621872 182 ntBASIC0.51□□□□□ -2.33
TOP3BO95985 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
TOP3BO95985 RNU6-1216P-201ENST00000362590 107 ntBASIC0.49□□□□□ -2.33
TOP3BO95985 MIR582-201ENST00000365731 98 ntBASIC0.49□□□□□ -2.33
TOP3BO95985 SNORD116-24-201ENST00000384549 92 ntBASIC0.49□□□□□ -2.33
TOP3BO95985 RNU6-1232P-201ENST00000516299 86 ntBASIC0.49□□□□□ -2.33
TOP3BO95985 RNA5SP67-201ENST00000516422 131 ntBASIC0.49□□□□□ -2.33
TOP3BO95985 U7.6-201ENST00000610841 64 ntBASIC0.49□□□□□ -2.33
TOP3BO95985 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TOP3BO95985 Y_RNA.250-201ENST00000364542 110 ntBASIC0.48□□□□□ -2.33
TOP3BO95985 RNU6-645P-201ENST00000364649 106 ntBASIC0.48□□□□□ -2.33
TOP3BO95985 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
TOP3BO95985 snoU13.13-201ENST00000458842 104 ntBASIC0.48□□□□□ -2.33
TOP3BO95985 RNU6-848P-201ENST00000515948 107 ntBASIC0.48□□□□□ -2.33
TOP3BO95985 RNU6-617P-201ENST00000516147 107 ntBASIC0.48□□□□□ -2.33
TOP3BO95985 RNU6-473P-201ENST00000516164 107 ntBASIC0.48□□□□□ -2.33
TOP3BO95985 RNU6-1049P-201ENST00000516414 107 ntBASIC0.48□□□□□ -2.33
TOP3BO95985 MIR6739-201ENST00000622461 75 ntBASIC0.48□□□□□ -2.33
TOP3BO95985 U6.111-201ENST00000636093 83 ntBASIC0.48□□□□□ -2.33
TOP3BO95985 SNORA63.6-201ENST00000364921 119 ntBASIC0.47□□□□□ -2.33
TOP3BO95985 RNU6-590P-201ENST00000365039 107 ntBASIC0.47□□□□□ -2.33
TOP3BO95985 MIR501-201ENST00000390204 84 ntBASIC0.47□□□□□ -2.33
TOP3BO95985 RNA5SP299-201ENST00000391203 116 ntBASIC0.47□□□□□ -2.33
TOP3BO95985 MIR548E-201ENST00000408287 88 ntBASIC0.47□□□□□ -2.33
TOP3BO95985 AC021146.9-201ENST00000512503 156 ntBASIC0.47□□□□□ -2.33
TOP3BO95985 MIR4802-201ENST00000581881 80 ntBASIC0.47□□□□□ -2.33
TOP3BO95985 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
TOP3BO95985 SNORD44.1-201ENST00000363202 61 ntBASIC0.46□□□□□ -2.34
TOP3BO95985 MIR760-201ENST00000390220 80 ntBASIC0.46□□□□□ -2.34
TOP3BO95985 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.46□□□□□ -2.34
TOP3BO95985 MTND4LP1-201ENST00000446263 157 ntBASIC0.46□□□□□ -2.34
TOP3BO95985 RNU6-863P-201ENST00000515989 104 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 222.2 ms