Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MIR6504-201ENST00000613520 61 ntBASIC0.94□□□□□ -2.26
PCDHA4Q9UN74 AC092634.7-201ENST00000621022 103 ntBASIC0.94□□□□□ -2.26
PCDHA4Q9UN74 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
PCDHA4Q9UN74 SNORD115-31-201ENST00000365318 82 ntBASIC0.93□□□□□ -2.26
PCDHA4Q9UN74 SNORD114-22-201ENST00000365423 72 ntBASIC0.93□□□□□ -2.26
PCDHA4Q9UN74 AC006210.1-201ENST00000424882 111 ntBASIC0.93□□□□□ -2.26
PCDHA4Q9UN74 AC211469.2-201ENST00000605461 205 ntBASIC0.93□□□□□ -2.26
PCDHA4Q9UN74 SNORD115-22-201ENST00000364456 82 ntBASIC0.92□□□□□ -2.26
PCDHA4Q9UN74 SNORD110-201ENST00000408189 75 ntBASIC0.92□□□□□ -2.26
PCDHA4Q9UN74 MIR1287-201ENST00000408492 90 ntBASIC0.92□□□□□ -2.26
PCDHA4Q9UN74 SNORD118-201ENST00000363593 134 ntBASIC0.91□□□□□ -2.26
PCDHA4Q9UN74 SNORD114-4-201ENST00000363962 75 ntBASIC0.91□□□□□ -2.26
PCDHA4Q9UN74 Y_RNA.226-201ENST00000364337 114 ntBASIC0.91□□□□□ -2.26
PCDHA4Q9UN74 RNU6-260P-201ENST00000384092 107 ntBASIC0.91□□□□□ -2.26
PCDHA4Q9UN74 RNU6-540P-201ENST00000384622 101 ntBASIC0.91□□□□□ -2.26
PCDHA4Q9UN74 MIR203A-201ENST00000384836 110 ntBASIC0.91□□□□□ -2.26
PCDHA4Q9UN74 RNU6-604P-201ENST00000390917 100 ntBASIC0.91□□□□□ -2.26
PCDHA4Q9UN74 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
PCDHA4Q9UN74 MIR4752-201ENST00000579672 72 ntBASIC0.91□□□□□ -2.26
PCDHA4Q9UN74 SNORA25.18-201ENST00000607153 114 ntBASIC0.91□□□□□ -2.26
PCDHA4Q9UN74 SNORA70.25-201ENST00000612741 95 ntBASIC0.91□□□□□ -2.26
PCDHA4Q9UN74 SNORD45A-201ENST00000384512 84 ntBASIC0.9□□□□□ -2.27
PCDHA4Q9UN74 MIR520E-201ENST00000384867 87 ntBASIC0.9□□□□□ -2.27
PCDHA4Q9UN74 AC069271.1-201ENST00000445577 156 ntBASIC0.9□□□□□ -2.27
PCDHA4Q9UN74 MIR3657-201ENST00000584818 117 ntBASIC0.9□□□□□ -2.27
PCDHA4Q9UN74 SNORA40.8-201ENST00000411034 126 ntBASIC0.89□□□□□ -2.27
PCDHA4Q9UN74 PSMC1P5-201ENST00000512850 177 ntBASIC0.89□□□□□ -2.27
PCDHA4Q9UN74 RNU6-539P-201ENST00000516665 103 ntBASIC0.89□□□□□ -2.27
PCDHA4Q9UN74 RNU1-29P-201ENST00000606574 126 ntBASIC0.89□□□□□ -2.27
PCDHA4Q9UN74 Y_RNA.224-201ENST00000364308 111 ntBASIC0.88□□□□□ -2.27
PCDHA4Q9UN74 Y_RNA.407-201ENST00000383986 113 ntBASIC0.88□□□□□ -2.27
PCDHA4Q9UN74 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.88□□□□□ -2.27
PCDHA4Q9UN74 RNU6-990P-201ENST00000364385 104 ntBASIC0.87□□□□□ -2.27
PCDHA4Q9UN74 MIR7-2-201ENST00000384970 110 ntBASIC0.87□□□□□ -2.27
PCDHA4Q9UN74 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
PCDHA4Q9UN74 RNU6-881P-201ENST00000516813 102 ntBASIC0.87□□□□□ -2.27
PCDHA4Q9UN74 MIR5706-201ENST00000579841 80 ntBASIC0.87□□□□□ -2.27
PCDHA4Q9UN74 AL590095.2-201ENST00000604136 117 ntBASIC0.87□□□□□ -2.27
PCDHA4Q9UN74 SNORA2.1-201ENST00000363089 137 ntBASIC0.86□□□□□ -2.27
PCDHA4Q9UN74 SNORA40.17-201ENST00000517256 115 ntBASIC0.86□□□□□ -2.27
PCDHA4Q9UN74 MIR4473-201ENST00000583731 91 ntBASIC0.86□□□□□ -2.27
PCDHA4Q9UN74 SNORD113.1-201ENST00000363280 73 ntBASIC0.85□□□□□ -2.27
PCDHA4Q9UN74 RNU6-649P-201ENST00000384463 107 ntBASIC0.85□□□□□ -2.27
PCDHA4Q9UN74 MIR518A1-201ENST00000385068 85 ntBASIC0.85□□□□□ -2.27
PCDHA4Q9UN74 SNORD30.1-201ENST00000391309 70 ntBASIC0.85□□□□□ -2.27
PCDHA4Q9UN74 SNORD71-201ENST00000411292 86 ntBASIC0.85□□□□□ -2.27
PCDHA4Q9UN74 MIR4452-201ENST00000583004 71 ntBASIC0.85□□□□□ -2.27
PCDHA4Q9UN74 MIR548AE1-201ENST00000583292 70 ntBASIC0.85□□□□□ -2.27
PCDHA4Q9UN74 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
PCDHA4Q9UN74 RNU6-895P-201ENST00000384125 103 ntBASIC0.84□□□□□ -2.27
PCDHA4Q9UN74 RNU6-663P-201ENST00000391105 106 ntBASIC0.84□□□□□ -2.27
PCDHA4Q9UN74 RPS29P1-201ENST00000465274 159 ntBASIC0.84□□□□□ -2.27
PCDHA4Q9UN74 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
PCDHA4Q9UN74 MIR652-201ENST00000385278 98 ntBASIC0.83□□□□□ -2.28
PCDHA4Q9UN74 HMGN2P22-201ENST00000427588 175 ntBASIC0.83□□□□□ -2.28
PCDHA4Q9UN74 SCARNA17.3-201ENST00000516381 125 ntBASIC0.82□□□□□ -2.28
PCDHA4Q9UN74 RNU4-54P-201ENST00000516428 129 ntBASIC0.82□□□□□ -2.28
PCDHA4Q9UN74 CYP3A137P-201ENST00000562436 69 ntBASIC0.82□□□□□ -2.28
PCDHA4Q9UN74 RNU6-1216P-201ENST00000362590 107 ntBASIC0.81□□□□□ -2.28
PCDHA4Q9UN74 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
PCDHA4Q9UN74 RNU6-590P-201ENST00000365039 107 ntBASIC0.8□□□□□ -2.28
PCDHA4Q9UN74 RNU6-788P-201ENST00000390967 104 ntBASIC0.8□□□□□ -2.28
PCDHA4Q9UN74 AC098934.3-201ENST00000430450 190 ntBASIC0.8□□□□□ -2.28
PCDHA4Q9UN74 RNU6-982P-201ENST00000516216 102 ntBASIC0.8□□□□□ -2.28
PCDHA4Q9UN74 RNA5SP220-201ENST00000516298 104 ntBASIC0.8□□□□□ -2.28
PCDHA4Q9UN74 RNA5SP147-201ENST00000516493 109 ntBASIC0.8□□□□□ -2.28
PCDHA4Q9UN74 uc_338.10-201ENST00000621872 182 ntBASIC0.8□□□□□ -2.28
PCDHA4Q9UN74 Y_RNA.125-201ENST00000363371 111 ntBASIC0.79□□□□□ -2.28
PCDHA4Q9UN74 SNORA2A-201ENST00000383885 135 ntBASIC0.79□□□□□ -2.28
PCDHA4Q9UN74 SNORD116-24-201ENST00000384549 92 ntBASIC0.79□□□□□ -2.28
PCDHA4Q9UN74 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
PCDHA4Q9UN74 MIR6734-201ENST00000621166 68 ntBASIC0.79□□□□□ -2.28
PCDHA4Q9UN74 U6.111-201ENST00000636093 83 ntBASIC0.79□□□□□ -2.28
PCDHA4Q9UN74 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.79□□□□□ -2.28
PCDHA4Q9UN74 Y_RNA.250-201ENST00000364542 110 ntBASIC0.78□□□□□ -2.28
PCDHA4Q9UN74 RNU6-848P-201ENST00000515948 107 ntBASIC0.78□□□□□ -2.28
PCDHA4Q9UN74 RNU6-617P-201ENST00000516147 107 ntBASIC0.78□□□□□ -2.28
PCDHA4Q9UN74 RNU6-473P-201ENST00000516164 107 ntBASIC0.78□□□□□ -2.28
PCDHA4Q9UN74 RNU6-1049P-201ENST00000516414 107 ntBASIC0.78□□□□□ -2.28
PCDHA4Q9UN74 RNU6-229P-201ENST00000516614 102 ntBASIC0.78□□□□□ -2.28
PCDHA4Q9UN74 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
PCDHA4Q9UN74 Y_RNA.423-201ENST00000384057 113 ntBASIC0.77□□□□□ -2.29
PCDHA4Q9UN74 RNU6-42P-201ENST00000384165 107 ntBASIC0.77□□□□□ -2.29
PCDHA4Q9UN74 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
PCDHA4Q9UN74 MIR548J-201ENST00000408833 112 ntBASIC0.77□□□□□ -2.29
PCDHA4Q9UN74 U7.6-201ENST00000610841 64 ntBASIC0.77□□□□□ -2.29
PCDHA4Q9UN74 MIR6788-201ENST00000618842 66 ntBASIC0.77□□□□□ -2.29
PCDHA4Q9UN74 MIR6755-201ENST00000619993 66 ntBASIC0.77□□□□□ -2.29
PCDHA4Q9UN74 MIR6739-201ENST00000622461 75 ntBASIC0.77□□□□□ -2.29
PCDHA4Q9UN74 RNU6-645P-201ENST00000364649 106 ntBASIC0.76□□□□□ -2.29
PCDHA4Q9UN74 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
PCDHA4Q9UN74 RNU6-1232P-201ENST00000516299 86 ntBASIC0.75□□□□□ -2.29
PCDHA4Q9UN74 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
PCDHA4Q9UN74 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
PCDHA4Q9UN74 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
PCDHA4Q9UN74 MIR582-201ENST00000365731 98 ntBASIC0.74□□□□□ -2.29
PCDHA4Q9UN74 Y_RNA.386-201ENST00000383913 105 ntBASIC0.74□□□□□ -2.29
PCDHA4Q9UN74 RNU6-945P-201ENST00000383947 107 ntBASIC0.74□□□□□ -2.29
PCDHA4Q9UN74 RNU6-800P-201ENST00000384473 103 ntBASIC0.74□□□□□ -2.29
PCDHA4Q9UN74 MTND4LP1-201ENST00000446263 157 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms