Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 AC018659.1-201ENST00000551083 169 ntBASIC1.13□□□□□ -2.23
SMPD4Q9NXE4 MIR4460-201ENST00000577862 86 ntBASIC1.13□□□□□ -2.23
SMPD4Q9NXE4 MIR6739-201ENST00000622461 75 ntBASIC1.13□□□□□ -2.23
SMPD4Q9NXE4 RNU1-141P-201ENST00000364623 158 ntBASIC1.12□□□□□ -2.23
SMPD4Q9NXE4 RNU6-269P-201ENST00000391077 97 ntBASIC1.12□□□□□ -2.23
SMPD4Q9NXE4 snoU13.13-201ENST00000458842 104 ntBASIC1.12□□□□□ -2.23
SMPD4Q9NXE4 RNU6-1089P-201ENST00000516473 104 ntBASIC1.12□□□□□ -2.23
SMPD4Q9NXE4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SMPD4Q9NXE4 RNU1-93P-201ENST00000364704 169 ntBASIC1.11□□□□□ -2.23
SMPD4Q9NXE4 RNU6-1335P-201ENST00000365426 107 ntBASIC1.11□□□□□ -2.23
SMPD4Q9NXE4 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
SMPD4Q9NXE4 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
SMPD4Q9NXE4 SNORD105-201ENST00000386910 85 ntBASIC1.11□□□□□ -2.23
SMPD4Q9NXE4 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
SMPD4Q9NXE4 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
SMPD4Q9NXE4 MIR6767-201ENST00000637302 66 ntBASIC1.11□□□□□ -2.23
SMPD4Q9NXE4 SNORD113-4-201ENST00000364802 75 ntBASIC1.1□□□□□ -2.23
SMPD4Q9NXE4 AL157398.1-201ENST00000452981 186 ntBASIC1.1□□□□□ -2.23
SMPD4Q9NXE4 RNA5SP484-201ENST00000458857 111 ntBASIC1.1□□□□□ -2.23
SMPD4Q9NXE4 RNU7-74P-201ENST00000459104 62 ntBASIC1.1□□□□□ -2.23
SMPD4Q9NXE4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.1□□□□□ -2.23
SMPD4Q9NXE4 MIR3678-201ENST00000578455 94 ntBASIC1.1□□□□□ -2.23
SMPD4Q9NXE4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SMPD4Q9NXE4 RNU6-940P-201ENST00000363433 104 ntBASIC1.09□□□□□ -2.23
SMPD4Q9NXE4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.09□□□□□ -2.23
SMPD4Q9NXE4 MIR520E-201ENST00000384867 87 ntBASIC1.09□□□□□ -2.23
SMPD4Q9NXE4 MIR548L-201ENST00000408303 86 ntBASIC1.09□□□□□ -2.23
SMPD4Q9NXE4 RNU6-469P-201ENST00000516253 101 ntBASIC1.09□□□□□ -2.23
SMPD4Q9NXE4 RNU6-135P-201ENST00000516769 101 ntBASIC1.09□□□□□ -2.23
SMPD4Q9NXE4 MIR548V-201ENST00000584165 80 ntBASIC1.09□□□□□ -2.23
SMPD4Q9NXE4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.08□□□□□ -2.24
SMPD4Q9NXE4 RNA5SP215-201ENST00000363440 122 ntBASIC1.08□□□□□ -2.24
SMPD4Q9NXE4 U7.7-201ENST00000459276 60 ntBASIC1.08□□□□□ -2.24
SMPD4Q9NXE4 SNORD124-201ENST00000459577 104 ntBASIC1.08□□□□□ -2.24
SMPD4Q9NXE4 RPS29P1-201ENST00000465274 159 ntBASIC1.08□□□□□ -2.24
SMPD4Q9NXE4 MIR3612-201ENST00000579753 87 ntBASIC1.08□□□□□ -2.24
SMPD4Q9NXE4 MIR7978-201ENST00000636158 59 ntBASIC1.08□□□□□ -2.24
SMPD4Q9NXE4 MIR573-201ENST00000384964 99 ntBASIC1.07□□□□□ -2.24
SMPD4Q9NXE4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SMPD4Q9NXE4 RNU6-122P-201ENST00000516818 107 ntBASIC1.07□□□□□ -2.24
SMPD4Q9NXE4 SNORD60.1-201ENST00000362451 73 ntBASIC1.06□□□□□ -2.24
SMPD4Q9NXE4 SNORA8.2-201ENST00000384372 139 ntBASIC1.06□□□□□ -2.24
SMPD4Q9NXE4 MIR630-201ENST00000384957 97 ntBASIC1.06□□□□□ -2.24
SMPD4Q9NXE4 SCARNA16.5-201ENST00000517114 183 ntBASIC1.06□□□□□ -2.24
SMPD4Q9NXE4 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
SMPD4Q9NXE4 RNU6-92P-201ENST00000605893 104 ntBASIC1.06□□□□□ -2.24
SMPD4Q9NXE4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.06□□□□□ -2.24
SMPD4Q9NXE4 AL162376.1-201ENST00000624117 175 ntBASIC1.06□□□□□ -2.24
SMPD4Q9NXE4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SMPD4Q9NXE4 MIR521-2-201ENST00000384818 87 ntBASIC1.05□□□□□ -2.24
SMPD4Q9NXE4 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
SMPD4Q9NXE4 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
SMPD4Q9NXE4 MIR548AE1-201ENST00000583292 70 ntBASIC1.05□□□□□ -2.24
SMPD4Q9NXE4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SMPD4Q9NXE4 SNORA36.1-201ENST00000363424 132 ntBASIC1.04□□□□□ -2.24
SMPD4Q9NXE4 RNU4-38P-201ENST00000364472 129 ntBASIC1.04□□□□□ -2.24
SMPD4Q9NXE4 MIR582-201ENST00000365731 98 ntBASIC1.04□□□□□ -2.24
SMPD4Q9NXE4 Y_RNA.633-201ENST00000459107 95 ntBASIC1.04□□□□□ -2.24
SMPD4Q9NXE4 MIR3938-201ENST00000582157 103 ntBASIC1.04□□□□□ -2.24
SMPD4Q9NXE4 U2.7-201ENST00000619197 100 ntBASIC1.04□□□□□ -2.24
SMPD4Q9NXE4 MIR7111-201ENST00000619751 72 ntBASIC1.04□□□□□ -2.24
SMPD4Q9NXE4 SNORA33.1-201ENST00000364957 130 ntBASIC1.03□□□□□ -2.24
SMPD4Q9NXE4 MIR548C-201ENST00000384815 97 ntBASIC1.03□□□□□ -2.24
SMPD4Q9NXE4 U4.4-201ENST00000620626 117 ntBASIC1.03□□□□□ -2.24
SMPD4Q9NXE4 MIR6828-201ENST00000636181 60 ntBASIC1.03□□□□□ -2.24
SMPD4Q9NXE4 Y_RNA.250-201ENST00000364542 110 ntBASIC1.02□□□□□ -2.25
SMPD4Q9NXE4 RNU6-1162P-201ENST00000384443 104 ntBASIC1.02□□□□□ -2.25
SMPD4Q9NXE4 MIR652-201ENST00000385278 98 ntBASIC1.02□□□□□ -2.25
SMPD4Q9NXE4 FABP5P4-201ENST00000437203 171 ntBASIC1.02□□□□□ -2.25
SMPD4Q9NXE4 AC021146.9-201ENST00000512503 156 ntBASIC1.02□□□□□ -2.25
SMPD4Q9NXE4 RNU7-174P-201ENST00000516248 59 ntBASIC1.02□□□□□ -2.25
SMPD4Q9NXE4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.02□□□□□ -2.25
SMPD4Q9NXE4 MIR6734-201ENST00000621166 68 ntBASIC1.02□□□□□ -2.25
SMPD4Q9NXE4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.02□□□□□ -2.25
SMPD4Q9NXE4 RNU1-124P-201ENST00000363861 145 ntBASIC1.01□□□□□ -2.25
SMPD4Q9NXE4 SNORD114-4-201ENST00000363962 75 ntBASIC1.01□□□□□ -2.25
SMPD4Q9NXE4 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
SMPD4Q9NXE4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
SMPD4Q9NXE4 RNU6-302P-201ENST00000365249 107 ntBASIC1□□□□□ -2.25
SMPD4Q9NXE4 SCARNA17.3-201ENST00000516381 125 ntBASIC1□□□□□ -2.25
SMPD4Q9NXE4 MIR18A-201ENST00000362310 71 ntBASIC0.99□□□□□ -2.25
SMPD4Q9NXE4 RNU6-42P-201ENST00000384165 107 ntBASIC0.99□□□□□ -2.25
SMPD4Q9NXE4 MIR548E-201ENST00000408287 88 ntBASIC0.99□□□□□ -2.25
SMPD4Q9NXE4 RNA5SP220-201ENST00000516298 104 ntBASIC0.99□□□□□ -2.25
SMPD4Q9NXE4 Y_RNA.722-201ENST00000517279 114 ntBASIC0.99□□□□□ -2.25
SMPD4Q9NXE4 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
SMPD4Q9NXE4 MIR4473-201ENST00000583731 91 ntBASIC0.99□□□□□ -2.25
SMPD4Q9NXE4 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
SMPD4Q9NXE4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.98□□□□□ -2.25
SMPD4Q9NXE4 RNU6-698P-201ENST00000363523 107 ntBASIC0.98□□□□□ -2.25
SMPD4Q9NXE4 RNU6-34P-201ENST00000364874 107 ntBASIC0.98□□□□□ -2.25
SMPD4Q9NXE4 RNU6-936P-201ENST00000384005 107 ntBASIC0.98□□□□□ -2.25
SMPD4Q9NXE4 RNA5SP227-201ENST00000516184 113 ntBASIC0.98□□□□□ -2.25
SMPD4Q9NXE4 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
SMPD4Q9NXE4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.98□□□□□ -2.25
SMPD4Q9NXE4 Y_RNA.407-201ENST00000383986 113 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 MIR200A-201ENST00000384875 90 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 MIR489-201ENST00000384923 84 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 MIR517B-201ENST00000385102 67 ntBASIC0.97□□□□□ -2.25
SMPD4Q9NXE4 RNU6-1246P-201ENST00000391064 107 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 282.5 ms