Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SNORD42B-201ENST00000458893 67 ntBASIC0.77□□□□□ -2.29
EBF3Q9H4W6 RNU6-469P-201ENST00000516253 101 ntBASIC0.77□□□□□ -2.29
EBF3Q9H4W6 RNU6-135P-201ENST00000516769 101 ntBASIC0.77□□□□□ -2.29
EBF3Q9H4W6 AC011195.1-201ENST00000578177 177 ntBASIC0.77□□□□□ -2.29
EBF3Q9H4W6 MIR3675-201ENST00000583661 73 ntBASIC0.77□□□□□ -2.29
EBF3Q9H4W6 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
EBF3Q9H4W6 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
EBF3Q9H4W6 RNU6V-201ENST00000384105 107 ntBASIC0.76□□□□□ -2.29
EBF3Q9H4W6 RNU6-269P-201ENST00000391077 97 ntBASIC0.76□□□□□ -2.29
EBF3Q9H4W6 SNORD75.2-201ENST00000408784 58 ntBASIC0.76□□□□□ -2.29
EBF3Q9H4W6 MIR6828-201ENST00000636181 60 ntBASIC0.76□□□□□ -2.29
EBF3Q9H4W6 RNU6-681P-201ENST00000364012 104 ntBASIC0.75□□□□□ -2.29
EBF3Q9H4W6 RNU4-45P-201ENST00000365469 141 ntBASIC0.75□□□□□ -2.29
EBF3Q9H4W6 RNY1P8-201ENST00000383970 114 ntBASIC0.75□□□□□ -2.29
EBF3Q9H4W6 SNORD45A-201ENST00000384512 84 ntBASIC0.75□□□□□ -2.29
EBF3Q9H4W6 SCARNA16.5-201ENST00000517114 183 ntBASIC0.75□□□□□ -2.29
EBF3Q9H4W6 SNORA40.17-201ENST00000517256 115 ntBASIC0.75□□□□□ -2.29
EBF3Q9H4W6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.75□□□□□ -2.29
EBF3Q9H4W6 SNORD115-22-201ENST00000364456 82 ntBASIC0.74□□□□□ -2.29
EBF3Q9H4W6 MIR608-201ENST00000384820 100 ntBASIC0.74□□□□□ -2.29
EBF3Q9H4W6 RNU7-24P-201ENST00000458867 62 ntBASIC0.74□□□□□ -2.29
EBF3Q9H4W6 ACA64.5-201ENST00000516207 127 ntBASIC0.74□□□□□ -2.29
EBF3Q9H4W6 RNU6-539P-201ENST00000516665 103 ntBASIC0.74□□□□□ -2.29
EBF3Q9H4W6 MIR6513-201ENST00000621188 64 ntBASIC0.74□□□□□ -2.29
EBF3Q9H4W6 AL162376.1-201ENST00000624117 175 ntBASIC0.74□□□□□ -2.29
EBF3Q9H4W6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
EBF3Q9H4W6 SNORD45.1-201ENST00000363181 77 ntBASIC0.73□□□□□ -2.29
EBF3Q9H4W6 RNU1-141P-201ENST00000364623 158 ntBASIC0.73□□□□□ -2.29
EBF3Q9H4W6 Y_RNA.386-201ENST00000383913 105 ntBASIC0.73□□□□□ -2.29
EBF3Q9H4W6 MIR154-201ENST00000385243 84 ntBASIC0.73□□□□□ -2.29
EBF3Q9H4W6 MT-TY-201ENST00000387409 66 ntBASIC0.73□□□□□ -2.29
EBF3Q9H4W6 RNU6-788P-201ENST00000390967 104 ntBASIC0.73□□□□□ -2.29
EBF3Q9H4W6 MIR548L-201ENST00000408303 86 ntBASIC0.73□□□□□ -2.29
EBF3Q9H4W6 RNA5SP484-201ENST00000458857 111 ntBASIC0.73□□□□□ -2.29
EBF3Q9H4W6 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
EBF3Q9H4W6 RNU6-1039P-201ENST00000383931 107 ntBASIC0.72□□□□□ -2.29
EBF3Q9H4W6 MIR203A-201ENST00000384836 110 ntBASIC0.72□□□□□ -2.29
EBF3Q9H4W6 RNU6-604P-201ENST00000390917 100 ntBASIC0.72□□□□□ -2.29
EBF3Q9H4W6 RNU6-274P-201ENST00000459566 107 ntBASIC0.72□□□□□ -2.29
EBF3Q9H4W6 RNU5B-6P-201ENST00000516765 68 ntBASIC0.72□□□□□ -2.29
EBF3Q9H4W6 RNA5SP94-201ENST00000516917 108 ntBASIC0.72□□□□□ -2.29
EBF3Q9H4W6 AC018659.1-201ENST00000551083 169 ntBASIC0.72□□□□□ -2.29
EBF3Q9H4W6 RNU6-871P-201ENST00000516122 100 ntBASIC0.71□□□□□ -2.3
EBF3Q9H4W6 MIR7107-201ENST00000611489 80 ntBASIC0.71□□□□□ -2.3
EBF3Q9H4W6 RNU6-990P-201ENST00000364385 104 ntBASIC0.7□□□□□ -2.3
EBF3Q9H4W6 SNORA8.2-201ENST00000384372 139 ntBASIC0.7□□□□□ -2.3
EBF3Q9H4W6 SNORD116-24-201ENST00000384549 92 ntBASIC0.7□□□□□ -2.3
EBF3Q9H4W6 MIR216B-201ENST00000390186 82 ntBASIC0.7□□□□□ -2.3
EBF3Q9H4W6 MIR936-201ENST00000401264 98 ntBASIC0.7□□□□□ -2.3
EBF3Q9H4W6 RNA5SP222-201ENST00000411039 105 ntBASIC0.7□□□□□ -2.3
EBF3Q9H4W6 AL691482.2-201ENST00000457453 84 ntBASIC0.7□□□□□ -2.3
EBF3Q9H4W6 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.7□□□□□ -2.3
EBF3Q9H4W6 RNU6-752P-201ENST00000516376 102 ntBASIC0.7□□□□□ -2.3
EBF3Q9H4W6 MIR4460-201ENST00000577862 86 ntBASIC0.7□□□□□ -2.3
EBF3Q9H4W6 RNU6-649P-201ENST00000384463 107 ntBASIC0.69□□□□□ -2.3
EBF3Q9H4W6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
EBF3Q9H4W6 RNU7-74P-201ENST00000459104 62 ntBASIC0.69□□□□□ -2.3
EBF3Q9H4W6 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
EBF3Q9H4W6 RNA5SP227-201ENST00000516184 113 ntBASIC0.69□□□□□ -2.3
EBF3Q9H4W6 RNU6-982P-201ENST00000516216 102 ntBASIC0.69□□□□□ -2.3
EBF3Q9H4W6 RNA5SP268-201ENST00000516828 124 ntBASIC0.69□□□□□ -2.3
EBF3Q9H4W6 MIR4752-201ENST00000579672 72 ntBASIC0.69□□□□□ -2.3
EBF3Q9H4W6 RNU1-29P-201ENST00000606574 126 ntBASIC0.69□□□□□ -2.3
EBF3Q9H4W6 MIR6509-201ENST00000614603 85 ntBASIC0.69□□□□□ -2.3
EBF3Q9H4W6 SNORD113.1-201ENST00000363280 73 ntBASIC0.68□□□□□ -2.3
EBF3Q9H4W6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.68□□□□□ -2.3
EBF3Q9H4W6 RNU6-663P-201ENST00000391105 106 ntBASIC0.68□□□□□ -2.3
EBF3Q9H4W6 SNORD30.1-201ENST00000391309 70 ntBASIC0.68□□□□□ -2.3
EBF3Q9H4W6 MIR3657-201ENST00000584818 117 ntBASIC0.68□□□□□ -2.3
EBF3Q9H4W6 U6.111-201ENST00000636093 83 ntBASIC0.68□□□□□ -2.3
EBF3Q9H4W6 RNU6-590P-201ENST00000365039 107 ntBASIC0.67□□□□□ -2.3
EBF3Q9H4W6 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
EBF3Q9H4W6 MIR193B-201ENST00000384907 83 ntBASIC0.67□□□□□ -2.3
EBF3Q9H4W6 MIR1265-201ENST00000408444 86 ntBASIC0.67□□□□□ -2.3
EBF3Q9H4W6 RNU6-881P-201ENST00000516813 102 ntBASIC0.67□□□□□ -2.3
EBF3Q9H4W6 MIR548AE1-201ENST00000583292 70 ntBASIC0.67□□□□□ -2.3
EBF3Q9H4W6 SNORA70.25-201ENST00000612741 95 ntBASIC0.67□□□□□ -2.3
EBF3Q9H4W6 AL109933.3-201ENST00000619095 188 ntBASIC0.67□□□□□ -2.3
EBF3Q9H4W6 RNA5SP517-201ENST00000364724 117 ntBASIC0.66□□□□□ -2.3
EBF3Q9H4W6 RNU6-260P-201ENST00000384092 107 ntBASIC0.66□□□□□ -2.3
EBF3Q9H4W6 AC069503.3-201ENST00000618674 145 ntBASIC0.66□□□□□ -2.3
EBF3Q9H4W6 RNU6-800P-201ENST00000384473 103 ntBASIC0.65□□□□□ -2.31
EBF3Q9H4W6 AC005520.4-201ENST00000604337 90 ntBASIC0.65□□□□□ -2.31
EBF3Q9H4W6 MIR8053-201ENST00000613344 75 ntBASIC0.65□□□□□ -2.31
EBF3Q9H4W6 RNA5SP347-201ENST00000362445 119 ntBASIC0.64□□□□□ -2.31
EBF3Q9H4W6 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
EBF3Q9H4W6 RNA5SP193-201ENST00000410353 107 ntBASIC0.64□□□□□ -2.31
EBF3Q9H4W6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
EBF3Q9H4W6 RNA5SP147-201ENST00000516493 109 ntBASIC0.64□□□□□ -2.31
EBF3Q9H4W6 MIR1273G-201ENST00000577677 100 ntBASIC0.64□□□□□ -2.31
EBF3Q9H4W6 SNORD114-23-201ENST00000363536 72 ntBASIC0.63□□□□□ -2.31
EBF3Q9H4W6 RNU6-895P-201ENST00000384125 103 ntBASIC0.63□□□□□ -2.31
EBF3Q9H4W6 RNU6-630P-201ENST00000391258 106 ntBASIC0.63□□□□□ -2.31
EBF3Q9H4W6 AC098934.3-201ENST00000430450 190 ntBASIC0.63□□□□□ -2.31
EBF3Q9H4W6 AC069271.1-201ENST00000445577 156 ntBASIC0.63□□□□□ -2.31
EBF3Q9H4W6 MIR4473-201ENST00000583731 91 ntBASIC0.63□□□□□ -2.31
EBF3Q9H4W6 SNORA25.18-201ENST00000607153 114 ntBASIC0.63□□□□□ -2.31
EBF3Q9H4W6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.62□□□□□ -2.31
EBF3Q9H4W6 RNU6-1216P-201ENST00000362590 107 ntBASIC0.62□□□□□ -2.31
EBF3Q9H4W6 MIR582-201ENST00000365731 98 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms