Protein–RNA interactions for Protein: Q8TDD1

DDX54, ATP-dependent RNA helicase DDX54, humanhuman

Known RBP Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54Q8TDD1 SNORD45A-201ENST00000384512 84 ntBASIC1.19□□□□□ -2.22
DDX54Q8TDD1 RNU6-540P-201ENST00000384622 101 ntBASIC1.19□□□□□ -2.22
DDX54Q8TDD1 SNORD75.2-201ENST00000408784 58 ntBASIC1.19□□□□□ -2.22
DDX54Q8TDD1 AL691482.2-201ENST00000457453 84 ntBASIC1.19□□□□□ -2.22
DDX54Q8TDD1 MIR4714-201ENST00000580728 77 ntBASIC1.19□□□□□ -2.22
DDX54Q8TDD1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.18□□□□□ -2.22
DDX54Q8TDD1 RNA5SP484-201ENST00000458857 111 ntBASIC1.18□□□□□ -2.22
DDX54Q8TDD1 RNU5B-6P-201ENST00000516765 68 ntBASIC1.18□□□□□ -2.22
DDX54Q8TDD1 MIR4460-201ENST00000577862 86 ntBASIC1.18□□□□□ -2.22
DDX54Q8TDD1 Y_RNA.178-201ENST00000363832 102 ntBASIC1.17□□□□□ -2.22
DDX54Q8TDD1 RNU1-141P-201ENST00000364623 158 ntBASIC1.17□□□□□ -2.22
DDX54Q8TDD1 RNU6-604P-201ENST00000390917 100 ntBASIC1.17□□□□□ -2.22
DDX54Q8TDD1 RNU6-871P-201ENST00000516122 100 ntBASIC1.17□□□□□ -2.22
DDX54Q8TDD1 RNA5SP227-201ENST00000516184 113 ntBASIC1.17□□□□□ -2.22
DDX54Q8TDD1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.17□□□□□ -2.22
DDX54Q8TDD1 SNORD115-22-201ENST00000364456 82 ntBASIC1.15□□□□□ -2.23
DDX54Q8TDD1 MIR216B-201ENST00000390186 82 ntBASIC1.15□□□□□ -2.23
DDX54Q8TDD1 RNU7-74P-201ENST00000459104 62 ntBASIC1.15□□□□□ -2.23
DDX54Q8TDD1 RNA5SP94-201ENST00000516917 108 ntBASIC1.15□□□□□ -2.23
DDX54Q8TDD1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.15□□□□□ -2.23
DDX54Q8TDD1 AL353765.1-201ENST00000605514 183 ntBASIC1.15□□□□□ -2.23
DDX54Q8TDD1 MIR6509-201ENST00000614603 85 ntBASIC1.15□□□□□ -2.23
DDX54Q8TDD1 RNU6-1039P-201ENST00000383931 107 ntBASIC1.14□□□□□ -2.23
DDX54Q8TDD1 MT-TY-201ENST00000387409 66 ntBASIC1.14□□□□□ -2.23
DDX54Q8TDD1 SNORD30.1-201ENST00000391309 70 ntBASIC1.14□□□□□ -2.23
DDX54Q8TDD1 RNA5SP268-201ENST00000516828 124 ntBASIC1.14□□□□□ -2.23
DDX54Q8TDD1 AC018659.1-201ENST00000551083 169 ntBASIC1.14□□□□□ -2.23
DDX54Q8TDD1 MIR6828-201ENST00000636181 60 ntBASIC1.14□□□□□ -2.23
DDX54Q8TDD1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.13□□□□□ -2.23
DDX54Q8TDD1 RNU6-990P-201ENST00000364385 104 ntBASIC1.12□□□□□ -2.23
DDX54Q8TDD1 SNORA36.2-201ENST00000384004 127 ntBASIC1.12□□□□□ -2.23
DDX54Q8TDD1 RNU6-649P-201ENST00000384463 107 ntBASIC1.12□□□□□ -2.23
DDX54Q8TDD1 RNU7-24P-201ENST00000458867 62 ntBASIC1.12□□□□□ -2.23
DDX54Q8TDD1 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
DDX54Q8TDD1 MIR4752-201ENST00000579672 72 ntBASIC1.12□□□□□ -2.23
DDX54Q8TDD1 MIR7107-201ENST00000611489 80 ntBASIC1.12□□□□□ -2.23
DDX54Q8TDD1 AL162376.1-201ENST00000624117 175 ntBASIC1.12□□□□□ -2.23
DDX54Q8TDD1 SNORA8.2-201ENST00000384372 139 ntBASIC1.11□□□□□ -2.23
DDX54Q8TDD1 RNU6-788P-201ENST00000390967 104 ntBASIC1.11□□□□□ -2.23
DDX54Q8TDD1 RNU6-539P-201ENST00000516665 103 ntBASIC1.11□□□□□ -2.23
DDX54Q8TDD1 RNU6-663P-201ENST00000391105 106 ntBASIC1.1□□□□□ -2.23
DDX54Q8TDD1 RNU6-982P-201ENST00000516216 102 ntBASIC1.1□□□□□ -2.23
DDX54Q8TDD1 RNU6-752P-201ENST00000516376 102 ntBASIC1.1□□□□□ -2.23
DDX54Q8TDD1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.1□□□□□ -2.23
DDX54Q8TDD1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
DDX54Q8TDD1 RNA5SP147-201ENST00000516493 109 ntBASIC1.09□□□□□ -2.23
DDX54Q8TDD1 RNU6-881P-201ENST00000516813 102 ntBASIC1.09□□□□□ -2.23
DDX54Q8TDD1 SNORD113.1-201ENST00000363280 73 ntBASIC1.08□□□□□ -2.24
DDX54Q8TDD1 RNU6-895P-201ENST00000384125 103 ntBASIC1.08□□□□□ -2.24
DDX54Q8TDD1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.08□□□□□ -2.24
DDX54Q8TDD1 ACA64.5-201ENST00000516207 127 ntBASIC1.08□□□□□ -2.24
DDX54Q8TDD1 SNORA40.17-201ENST00000517256 115 ntBASIC1.07□□□□□ -2.24
DDX54Q8TDD1 MIR3657-201ENST00000584818 117 ntBASIC1.07□□□□□ -2.24
DDX54Q8TDD1 SNORA70.25-201ENST00000612741 95 ntBASIC1.07□□□□□ -2.24
DDX54Q8TDD1 MIR6513-201ENST00000621188 64 ntBASIC1.07□□□□□ -2.24
DDX54Q8TDD1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
DDX54Q8TDD1 RNA5SP517-201ENST00000364724 117 ntBASIC1.06□□□□□ -2.24
DDX54Q8TDD1 MIR4473-201ENST00000583731 91 ntBASIC1.06□□□□□ -2.24
DDX54Q8TDD1 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
DDX54Q8TDD1 RNU6-260P-201ENST00000384092 107 ntBASIC1.05□□□□□ -2.24
DDX54Q8TDD1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
DDX54Q8TDD1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.05□□□□□ -2.24
DDX54Q8TDD1 SNORA25.18-201ENST00000607153 114 ntBASIC1.05□□□□□ -2.24
DDX54Q8TDD1 MIR8053-201ENST00000613344 75 ntBASIC1.05□□□□□ -2.24
DDX54Q8TDD1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.05□□□□□ -2.24
DDX54Q8TDD1 MIR6835-201ENST00000621552 64 ntBASIC1.05□□□□□ -2.24
DDX54Q8TDD1 U6.111-201ENST00000636093 83 ntBASIC1.05□□□□□ -2.24
DDX54Q8TDD1 Y_RNA.386-201ENST00000383913 105 ntBASIC1.04□□□□□ -2.24
DDX54Q8TDD1 SNORD116-24-201ENST00000384549 92 ntBASIC1.04□□□□□ -2.24
DDX54Q8TDD1 MIR193B-201ENST00000384907 83 ntBASIC1.04□□□□□ -2.24
DDX54Q8TDD1 MIR936-201ENST00000401264 98 ntBASIC1.04□□□□□ -2.24
DDX54Q8TDD1 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
DDX54Q8TDD1 MIR548AE1-201ENST00000583292 70 ntBASIC1.04□□□□□ -2.24
DDX54Q8TDD1 AC069503.3-201ENST00000618674 145 ntBASIC1.04□□□□□ -2.24
DDX54Q8TDD1 RNU4-45P-201ENST00000365469 141 ntBASIC1.03□□□□□ -2.24
DDX54Q8TDD1 MIR608-201ENST00000384820 100 ntBASIC1.03□□□□□ -2.24
DDX54Q8TDD1 MIR508-201ENST00000384857 115 ntBASIC1.03□□□□□ -2.24
DDX54Q8TDD1 AC006210.1-201ENST00000424882 111 ntBASIC1.03□□□□□ -2.24
DDX54Q8TDD1 AC069271.1-201ENST00000445577 156 ntBASIC1.03□□□□□ -2.24
DDX54Q8TDD1 snoU13.13-201ENST00000458842 104 ntBASIC1.03□□□□□ -2.24
DDX54Q8TDD1 MIR1273G-201ENST00000577677 100 ntBASIC1.03□□□□□ -2.24
DDX54Q8TDD1 AL109933.3-201ENST00000619095 188 ntBASIC1.03□□□□□ -2.24
DDX54Q8TDD1 RNU6-800P-201ENST00000384473 103 ntBASIC1.02□□□□□ -2.25
DDX54Q8TDD1 SNORD110-201ENST00000408189 75 ntBASIC1.02□□□□□ -2.25
DDX54Q8TDD1 Y_RNA.68-201ENST00000362881 102 ntBASIC1.01□□□□□ -2.25
DDX54Q8TDD1 RNA5SP457-201ENST00000363657 124 ntBASIC1.01□□□□□ -2.25
DDX54Q8TDD1 RNU6-590P-201ENST00000365039 107 ntBASIC1.01□□□□□ -2.25
DDX54Q8TDD1 MIR140-201ENST00000385282 100 ntBASIC1.01□□□□□ -2.25
DDX54Q8TDD1 RNU6-630P-201ENST00000391258 106 ntBASIC1.01□□□□□ -2.25
DDX54Q8TDD1 RNU6-1216P-201ENST00000362590 107 ntBASIC1□□□□□ -2.25
DDX54Q8TDD1 AL590095.2-201ENST00000604136 117 ntBASIC1□□□□□ -2.25
DDX54Q8TDD1 Y_RNA.340-201ENST00000365330 92 ntBASIC0.99□□□□□ -2.25
DDX54Q8TDD1 MIR652-201ENST00000385278 98 ntBASIC0.99□□□□□ -2.25
DDX54Q8TDD1 RNU4-54P-201ENST00000516428 129 ntBASIC0.99□□□□□ -2.25
DDX54Q8TDD1 AC005520.4-201ENST00000604337 90 ntBASIC0.99□□□□□ -2.25
DDX54Q8TDD1 RNU1-29P-201ENST00000606574 126 ntBASIC0.99□□□□□ -2.25
DDX54Q8TDD1 AC092634.7-201ENST00000621022 103 ntBASIC0.99□□□□□ -2.25
DDX54Q8TDD1 SNORD114-2-201ENST00000363953 78 ntBASIC0.98□□□□□ -2.25
DDX54Q8TDD1 RNU6-351P-201ENST00000516097 100 ntBASIC0.98□□□□□ -2.25
DDX54Q8TDD1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms