Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNU6-687P-201ENST00000516443 89 ntBASIC0.92□□□□□ -2.26
SYNE4Q8N205 RNU6-1057P-201ENST00000517162 102 ntBASIC0.92□□□□□ -2.26
SYNE4Q8N205 NAMPTP3-201ENST00000569273 224 ntBASIC0.92□□□□□ -2.26
SYNE4Q8N205 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.92□□□□□ -2.26
SYNE4Q8N205 MIR4773-1-201ENST00000637203 78 ntBASIC0.92□□□□□ -2.26
SYNE4Q8N205 RNU6-35P-201ENST00000384530 107 ntBASIC0.91□□□□□ -2.26
SYNE4Q8N205 RNU6-469P-201ENST00000516253 101 ntBASIC0.91□□□□□ -2.26
SYNE4Q8N205 AL353765.1-201ENST00000605514 183 ntBASIC0.91□□□□□ -2.26
SYNE4Q8N205 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SYNE4Q8N205 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
SYNE4Q8N205 RNU6-269P-201ENST00000391077 97 ntBASIC0.9□□□□□ -2.27
SYNE4Q8N205 RNU2-59P-201ENST00000410482 191 ntBASIC0.9□□□□□ -2.27
SYNE4Q8N205 SNORD42B-201ENST00000458893 67 ntBASIC0.9□□□□□ -2.27
SYNE4Q8N205 RNU6-807P-201ENST00000516805 107 ntBASIC0.9□□□□□ -2.27
SYNE4Q8N205 MIR548O2-201ENST00000616090 70 ntBASIC0.9□□□□□ -2.27
SYNE4Q8N205 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.9□□□□□ -2.27
SYNE4Q8N205 MIR1297-201ENST00000637311 77 ntBASIC0.9□□□□□ -2.27
SYNE4Q8N205 MIR6866-201ENST00000638146 69 ntBASIC0.9□□□□□ -2.27
SYNE4Q8N205 SNORD115-31-201ENST00000365318 82 ntBASIC0.89□□□□□ -2.27
SYNE4Q8N205 U3.27-201ENST00000391237 200 ntBASIC0.89□□□□□ -2.27
SYNE4Q8N205 RNU6-380P-201ENST00000410207 107 ntBASIC0.89□□□□□ -2.27
SYNE4Q8N205 AC139453.2-201ENST00000487255 133 ntBASIC0.89□□□□□ -2.27
SYNE4Q8N205 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
SYNE4Q8N205 SCARNA16.5-201ENST00000517114 183 ntBASIC0.89□□□□□ -2.27
SYNE4Q8N205 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
SYNE4Q8N205 RNU6V-201ENST00000384105 107 ntBASIC0.88□□□□□ -2.27
SYNE4Q8N205 RNU6-411P-201ENST00000384451 107 ntBASIC0.88□□□□□ -2.27
SYNE4Q8N205 RNU6-1241P-201ENST00000384536 107 ntBASIC0.88□□□□□ -2.27
SYNE4Q8N205 MIR548L-201ENST00000408303 86 ntBASIC0.88□□□□□ -2.27
SYNE4Q8N205 RNA5SP484-201ENST00000458857 111 ntBASIC0.88□□□□□ -2.27
SYNE4Q8N205 RNA5SP94-201ENST00000516917 108 ntBASIC0.88□□□□□ -2.27
SYNE4Q8N205 RNA5SP499-201ENST00000363982 119 ntBASIC0.87□□□□□ -2.27
SYNE4Q8N205 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
SYNE4Q8N205 RNA5SP222-201ENST00000411039 105 ntBASIC0.87□□□□□ -2.27
SYNE4Q8N205 AC098934.3-201ENST00000430450 190 ntBASIC0.87□□□□□ -2.27
SYNE4Q8N205 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
SYNE4Q8N205 RNU6-135P-201ENST00000516769 101 ntBASIC0.87□□□□□ -2.27
SYNE4Q8N205 MIR7107-201ENST00000611489 80 ntBASIC0.87□□□□□ -2.27
SYNE4Q8N205 MIR2909-201ENST00000617113 69 ntBASIC0.87□□□□□ -2.27
SYNE4Q8N205 MIR6828-201ENST00000636181 60 ntBASIC0.87□□□□□ -2.27
SYNE4Q8N205 RNA5SP347-201ENST00000362445 119 ntBASIC0.86□□□□□ -2.27
SYNE4Q8N205 RNU6-495P-201ENST00000362995 107 ntBASIC0.86□□□□□ -2.27
SYNE4Q8N205 RNU6-587P-201ENST00000391282 106 ntBASIC0.86□□□□□ -2.27
SYNE4Q8N205 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.86□□□□□ -2.27
SYNE4Q8N205 AC073261.1-201ENST00000429409 121 ntBASIC0.86□□□□□ -2.27
SYNE4Q8N205 SNORA40.17-201ENST00000517256 115 ntBASIC0.86□□□□□ -2.27
SYNE4Q8N205 AC243829.3-201ENST00000622177 108 ntBASIC0.86□□□□□ -2.27
SYNE4Q8N205 MIR203A-201ENST00000384836 110 ntBASIC0.85□□□□□ -2.27
SYNE4Q8N205 SNORD75.2-201ENST00000408784 58 ntBASIC0.85□□□□□ -2.27
SYNE4Q8N205 AC018659.1-201ENST00000551083 169 ntBASIC0.85□□□□□ -2.27
SYNE4Q8N205 MIR4752-201ENST00000579672 72 ntBASIC0.85□□□□□ -2.27
SYNE4Q8N205 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.84□□□□□ -2.27
SYNE4Q8N205 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
SYNE4Q8N205 RNU1-141P-201ENST00000364623 158 ntBASIC0.84□□□□□ -2.27
SYNE4Q8N205 MT-TY-201ENST00000387409 66 ntBASIC0.84□□□□□ -2.27
SYNE4Q8N205 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SYNE4Q8N205 RNU5B-6P-201ENST00000516765 68 ntBASIC0.84□□□□□ -2.27
SYNE4Q8N205 AL162376.1-201ENST00000624117 175 ntBASIC0.84□□□□□ -2.27
SYNE4Q8N205 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
SYNE4Q8N205 SNORD45A-201ENST00000384512 84 ntBASIC0.83□□□□□ -2.28
SYNE4Q8N205 RNU6-540P-201ENST00000384622 101 ntBASIC0.83□□□□□ -2.28
SYNE4Q8N205 RNU6-634P-201ENST00000459134 106 ntBASIC0.83□□□□□ -2.28
SYNE4Q8N205 RNA5SP227-201ENST00000516184 113 ntBASIC0.83□□□□□ -2.28
SYNE4Q8N205 RNA5SP268-201ENST00000516828 124 ntBASIC0.83□□□□□ -2.28
SYNE4Q8N205 MIR3675-201ENST00000583661 73 ntBASIC0.83□□□□□ -2.28
SYNE4Q8N205 RNU6-990P-201ENST00000364385 104 ntBASIC0.82□□□□□ -2.28
SYNE4Q8N205 SNORD115-22-201ENST00000364456 82 ntBASIC0.82□□□□□ -2.28
SYNE4Q8N205 RNU6-604P-201ENST00000390917 100 ntBASIC0.82□□□□□ -2.28
SYNE4Q8N205 RNU6-274P-201ENST00000459566 107 ntBASIC0.82□□□□□ -2.28
SYNE4Q8N205 AC114801.3-201ENST00000510231 177 ntBASIC0.82□□□□□ -2.28
SYNE4Q8N205 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.82□□□□□ -2.28
SYNE4Q8N205 SNORA70.25-201ENST00000612741 95 ntBASIC0.82□□□□□ -2.28
SYNE4Q8N205 RNU6-681P-201ENST00000364012 104 ntBASIC0.81□□□□□ -2.28
SYNE4Q8N205 RNA5SP517-201ENST00000364724 117 ntBASIC0.81□□□□□ -2.28
SYNE4Q8N205 RNU6-1039P-201ENST00000383931 107 ntBASIC0.81□□□□□ -2.28
SYNE4Q8N205 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
SYNE4Q8N205 MIR4460-201ENST00000577862 86 ntBASIC0.81□□□□□ -2.28
SYNE4Q8N205 RNU1-29P-201ENST00000606574 126 ntBASIC0.81□□□□□ -2.28
SYNE4Q8N205 SNORD45.1-201ENST00000363181 77 ntBASIC0.8□□□□□ -2.28
SYNE4Q8N205 SNORA36.2-201ENST00000384004 127 ntBASIC0.8□□□□□ -2.28
SYNE4Q8N205 SNORA8.2-201ENST00000384372 139 ntBASIC0.8□□□□□ -2.28
SYNE4Q8N205 RNU7-24P-201ENST00000458867 62 ntBASIC0.8□□□□□ -2.28
SYNE4Q8N205 RNU6-229P-201ENST00000516614 102 ntBASIC0.8□□□□□ -2.28
SYNE4Q8N205 SNORA25.18-201ENST00000607153 114 ntBASIC0.8□□□□□ -2.28
SYNE4Q8N205 MIR154-201ENST00000385243 84 ntBASIC0.79□□□□□ -2.28
SYNE4Q8N205 AL691482.2-201ENST00000457453 84 ntBASIC0.79□□□□□ -2.28
SYNE4Q8N205 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.79□□□□□ -2.28
SYNE4Q8N205 MIR548AE1-201ENST00000583292 70 ntBASIC0.79□□□□□ -2.28
SYNE4Q8N205 MIR6509-201ENST00000614603 85 ntBASIC0.79□□□□□ -2.28
SYNE4Q8N205 RNU7-74P-201ENST00000459104 62 ntBASIC0.78□□□□□ -2.28
SYNE4Q8N205 RNU6-982P-201ENST00000516216 102 ntBASIC0.78□□□□□ -2.28
SYNE4Q8N205 AC069271.1-201ENST00000445577 156 ntBASIC0.77□□□□□ -2.29
SYNE4Q8N205 RNU4-54P-201ENST00000516428 129 ntBASIC0.77□□□□□ -2.29
SYNE4Q8N205 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
SYNE4Q8N205 MIR140-201ENST00000385282 100 ntBASIC0.76□□□□□ -2.29
SYNE4Q8N205 MIR216B-201ENST00000390186 82 ntBASIC0.76□□□□□ -2.29
SYNE4Q8N205 RNA5SP147-201ENST00000516493 109 ntBASIC0.76□□□□□ -2.29
SYNE4Q8N205 MIR4473-201ENST00000583731 91 ntBASIC0.76□□□□□ -2.29
SYNE4Q8N205 MIR3657-201ENST00000584818 117 ntBASIC0.76□□□□□ -2.29
SYNE4Q8N205 MIR6086-201ENST00000638065 55 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms