Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNORA67.6-201ENST00000391093 99 ntBASIC1.56□□□□□ -2.16
FOXR1Q6PIV2 AC021146.9-201ENST00000512503 156 ntBASIC1.56□□□□□ -2.16
FOXR1Q6PIV2 RNU6-469P-201ENST00000516253 101 ntBASIC1.56□□□□□ -2.16
FOXR1Q6PIV2 RNA5SP327-201ENST00000362494 101 ntBASIC1.55□□□□□ -2.16
FOXR1Q6PIV2 MIR222-201ENST00000384992 110 ntBASIC1.55□□□□□ -2.16
FOXR1Q6PIV2 MIR517B-201ENST00000385102 67 ntBASIC1.55□□□□□ -2.16
FOXR1Q6PIV2 Y_RNA.633-201ENST00000459107 95 ntBASIC1.55□□□□□ -2.16
FOXR1Q6PIV2 U7.7-201ENST00000459276 60 ntBASIC1.55□□□□□ -2.16
FOXR1Q6PIV2 MIR548AE1-201ENST00000583292 70 ntBASIC1.55□□□□□ -2.16
FOXR1Q6PIV2 RNU6-698P-201ENST00000363523 107 ntBASIC1.54□□□□□ -2.16
FOXR1Q6PIV2 Y_RNA.250-201ENST00000364542 110 ntBASIC1.54□□□□□ -2.16
FOXR1Q6PIV2 RNU6-34P-201ENST00000364874 107 ntBASIC1.54□□□□□ -2.16
FOXR1Q6PIV2 MIR652-201ENST00000385278 98 ntBASIC1.54□□□□□ -2.16
FOXR1Q6PIV2 SNORD113-2-201ENST00000391082 72 ntBASIC1.54□□□□□ -2.16
FOXR1Q6PIV2 RNU4-88P-201ENST00000411220 86 ntBASIC1.54□□□□□ -2.16
FOXR1Q6PIV2 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
FOXR1Q6PIV2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.54□□□□□ -2.16
FOXR1Q6PIV2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
FOXR1Q6PIV2 Y_RNA.125-201ENST00000363371 111 ntBASIC1.53□□□□□ -2.16
FOXR1Q6PIV2 SNORA8.2-201ENST00000384372 139 ntBASIC1.53□□□□□ -2.16
FOXR1Q6PIV2 SNORA41B-201ENST00000384785 128 ntBASIC1.53□□□□□ -2.16
FOXR1Q6PIV2 SNORD12-201ENST00000391002 90 ntBASIC1.53□□□□□ -2.16
FOXR1Q6PIV2 RNU6-1246P-201ENST00000391064 107 ntBASIC1.53□□□□□ -2.16
FOXR1Q6PIV2 RNU6-135P-201ENST00000516769 101 ntBASIC1.53□□□□□ -2.16
FOXR1Q6PIV2 Y_RNA.325-201ENST00000365171 122 ntBASIC1.52□□□□□ -2.17
FOXR1Q6PIV2 MIR3612-201ENST00000579753 87 ntBASIC1.52□□□□□ -2.17
FOXR1Q6PIV2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.52□□□□□ -2.17
FOXR1Q6PIV2 SNORD114-4-201ENST00000363962 75 ntBASIC1.51□□□□□ -2.17
FOXR1Q6PIV2 SNORA25-201ENST00000384384 134 ntBASIC1.51□□□□□ -2.17
FOXR1Q6PIV2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.51□□□□□ -2.17
FOXR1Q6PIV2 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
FOXR1Q6PIV2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXR1Q6PIV2 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
FOXR1Q6PIV2 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
FOXR1Q6PIV2 SCARNA16.5-201ENST00000517114 183 ntBASIC1.5□□□□□ -2.17
FOXR1Q6PIV2 AL162376.1-201ENST00000624117 175 ntBASIC1.5□□□□□ -2.17
FOXR1Q6PIV2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
FOXR1Q6PIV2 SNORD124-201ENST00000459577 104 ntBASIC1.49□□□□□ -2.17
FOXR1Q6PIV2 MIR573-201ENST00000384964 99 ntBASIC1.48□□□□□ -2.17
FOXR1Q6PIV2 MIR150-201ENST00000385048 84 ntBASIC1.48□□□□□ -2.17
FOXR1Q6PIV2 MIR548E-201ENST00000408287 88 ntBASIC1.48□□□□□ -2.17
FOXR1Q6PIV2 SCARNA17.3-201ENST00000516381 125 ntBASIC1.48□□□□□ -2.17
FOXR1Q6PIV2 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
FOXR1Q6PIV2 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
FOXR1Q6PIV2 MIR4255-201ENST00000579351 72 ntBASIC1.48□□□□□ -2.17
FOXR1Q6PIV2 MIR4473-201ENST00000583731 91 ntBASIC1.48□□□□□ -2.17
FOXR1Q6PIV2 AC090617.8-201ENST00000623339 167 ntBASIC1.48□□□□□ -2.17
FOXR1Q6PIV2 SNORA9.1-201ENST00000362412 131 ntBASIC1.47□□□□□ -2.17
FOXR1Q6PIV2 SNORA36.1-201ENST00000363424 132 ntBASIC1.47□□□□□ -2.17
FOXR1Q6PIV2 MIR758-201ENST00000390227 88 ntBASIC1.47□□□□□ -2.17
FOXR1Q6PIV2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.47□□□□□ -2.17
FOXR1Q6PIV2 MIR4421-201ENST00000578133 69 ntBASIC1.47□□□□□ -2.17
FOXR1Q6PIV2 SNORA63.6-201ENST00000364921 119 ntBASIC1.46□□□□□ -2.18
FOXR1Q6PIV2 SNORA15B-2-201ENST00000384058 135 ntBASIC1.46□□□□□ -2.18
FOXR1Q6PIV2 SNORA15B-1-201ENST00000384334 135 ntBASIC1.46□□□□□ -2.18
FOXR1Q6PIV2 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
FOXR1Q6PIV2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.46□□□□□ -2.18
FOXR1Q6PIV2 RNU6-753P-201ENST00000363926 107 ntBASIC1.45□□□□□ -2.18
FOXR1Q6PIV2 Y_RNA.407-201ENST00000383986 113 ntBASIC1.45□□□□□ -2.18
FOXR1Q6PIV2 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
FOXR1Q6PIV2 MIR6828-201ENST00000636181 60 ntBASIC1.45□□□□□ -2.18
FOXR1Q6PIV2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.44□□□□□ -2.18
FOXR1Q6PIV2 Y_RNA.246-201ENST00000364495 108 ntBASIC1.44□□□□□ -2.18
FOXR1Q6PIV2 MIR489-201ENST00000384923 84 ntBASIC1.44□□□□□ -2.18
FOXR1Q6PIV2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
FOXR1Q6PIV2 snoU13.18-201ENST00000459483 104 ntBASIC1.43□□□□□ -2.18
FOXR1Q6PIV2 CYP3A54P-201ENST00000566950 75 ntBASIC1.43□□□□□ -2.18
FOXR1Q6PIV2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.43□□□□□ -2.18
FOXR1Q6PIV2 MIR6734-201ENST00000621166 68 ntBASIC1.43□□□□□ -2.18
FOXR1Q6PIV2 uc_338.10-201ENST00000621872 182 ntBASIC1.43□□□□□ -2.18
FOXR1Q6PIV2 RNU6-392P-201ENST00000364926 101 ntBASIC1.42□□□□□ -2.18
FOXR1Q6PIV2 MIR1276-201ENST00000408707 83 ntBASIC1.42□□□□□ -2.18
FOXR1Q6PIV2 RNA5SP227-201ENST00000516184 113 ntBASIC1.42□□□□□ -2.18
FOXR1Q6PIV2 MIR4752-201ENST00000579672 72 ntBASIC1.42□□□□□ -2.18
FOXR1Q6PIV2 MIR6504-201ENST00000613520 61 ntBASIC1.42□□□□□ -2.18
FOXR1Q6PIV2 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
FOXR1Q6PIV2 Y_RNA.379-201ENST00000365653 102 ntBASIC1.41□□□□□ -2.18
FOXR1Q6PIV2 RNU6-520P-201ENST00000384717 104 ntBASIC1.41□□□□□ -2.18
FOXR1Q6PIV2 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
FOXR1Q6PIV2 FABP5P4-201ENST00000437203 171 ntBASIC1.41□□□□□ -2.18
FOXR1Q6PIV2 MIR6078-201ENST00000611069 100 ntBASIC1.41□□□□□ -2.18
FOXR1Q6PIV2 SNORA70.25-201ENST00000612741 95 ntBASIC1.41□□□□□ -2.18
FOXR1Q6PIV2 SNORD110-201ENST00000408189 75 ntBASIC1.4□□□□□ -2.19
FOXR1Q6PIV2 AC006210.1-201ENST00000424882 111 ntBASIC1.4□□□□□ -2.19
FOXR1Q6PIV2 RNU6-980P-201ENST00000516925 103 ntBASIC1.4□□□□□ -2.19
FOXR1Q6PIV2 MIR18A-201ENST00000362310 71 ntBASIC1.39□□□□□ -2.19
FOXR1Q6PIV2 MIR516B1-201ENST00000385211 90 ntBASIC1.39□□□□□ -2.19
FOXR1Q6PIV2 RNA5SP102-201ENST00000516865 106 ntBASIC1.39□□□□□ -2.19
FOXR1Q6PIV2 RNU6-231P-201ENST00000517122 103 ntBASIC1.39□□□□□ -2.19
FOXR1Q6PIV2 MIR548AG1-201ENST00000579932 66 ntBASIC1.39□□□□□ -2.19
FOXR1Q6PIV2 MIR4452-201ENST00000583004 71 ntBASIC1.39□□□□□ -2.19
FOXR1Q6PIV2 MIR7107-201ENST00000611489 80 ntBASIC1.39□□□□□ -2.19
FOXR1Q6PIV2 MIR19B1-201ENST00000384829 87 ntBASIC1.38□□□□□ -2.19
FOXR1Q6PIV2 RNA5SP268-201ENST00000516828 124 ntBASIC1.38□□□□□ -2.19
FOXR1Q6PIV2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
FOXR1Q6PIV2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.37□□□□□ -2.19
FOXR1Q6PIV2 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
FOXR1Q6PIV2 RNU6-42P-201ENST00000384165 107 ntBASIC1.37□□□□□ -2.19
FOXR1Q6PIV2 AC011195.1-201ENST00000578177 177 ntBASIC1.37□□□□□ -2.19
FOXR1Q6PIV2 U6.96-201ENST00000636425 70 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 260.8 ms