Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.38□□□□□ -2.63
COL4A5P29400 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.38□□□□□ -2.63
COL4A5P29400 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.38□□□□□ -2.63
COL4A5P29400 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.38□□□□□ -2.63
COL4A5P29400 RNU6-260P-201ENST00000384092 107 ntBASIC-1.38□□□□□ -2.63
COL4A5P29400 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.38□□□□□ -2.63
COL4A5P29400 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.38□□□□□ -2.63
COL4A5P29400 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.38□□□□□ -2.63
COL4A5P29400 MIR548AM-201ENST00000584298 74 ntBASIC-1.38□□□□□ -2.63
COL4A5P29400 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.38□□□□□ -2.63
COL4A5P29400 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.38□□□□□ -2.63
COL4A5P29400 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.39□□□□□ -2.63
COL4A5P29400 RNU6-194P-201ENST00000363862 105 ntBASIC-1.39□□□□□ -2.63
COL4A5P29400 MT-TI-201ENST00000387365 69 ntBASIC-1.39□□□□□ -2.63
COL4A5P29400 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.39□□□□□ -2.63
COL4A5P29400 MIR548P-201ENST00000408336 84 ntBASIC-1.39□□□□□ -2.63
COL4A5P29400 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.39□□□□□ -2.63
COL4A5P29400 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.39□□□□□ -2.63
COL4A5P29400 SNORD37.2-201ENST00000391075 66 ntBASIC-1.39□□□□□ -2.63
COL4A5P29400 RPL35AP4-201ENST00000412007 102 ntBASIC-1.39□□□□□ -2.63
COL4A5P29400 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.39□□□□□ -2.63
COL4A5P29400 U7.5-201ENST00000517224 61 ntBASIC-1.39□□□□□ -2.63
COL4A5P29400 SNORA63.2-201ENST00000362603 126 ntBASIC-1.4□□□□□ -2.63
COL4A5P29400 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.4□□□□□ -2.63
COL4A5P29400 RNU6-774P-201ENST00000363238 107 ntBASIC-1.4□□□□□ -2.63
COL4A5P29400 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.4□□□□□ -2.63
COL4A5P29400 SNORD50.2-201ENST00000365465 70 ntBASIC-1.4□□□□□ -2.63
COL4A5P29400 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.4□□□□□ -2.63
COL4A5P29400 MIR548U-201ENST00000390728 81 ntBASIC-1.4□□□□□ -2.63
COL4A5P29400 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.4□□□□□ -2.63
COL4A5P29400 RNU4-88P-201ENST00000411220 86 ntBASIC-1.4□□□□□ -2.63
COL4A5P29400 MTATP6P29-201ENST00000415057 132 ntBASIC-1.4□□□□□ -2.63
COL4A5P29400 FGF7P7-201ENST00000514120 227 ntBASIC-1.4□□□□□ -2.63
COL4A5P29400 RNU6-238P-201ENST00000363313 106 ntBASIC-1.41□□□□□ -2.63
COL4A5P29400 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.41□□□□□ -2.63
COL4A5P29400 RNU6-841P-201ENST00000383872 107 ntBASIC-1.41□□□□□ -2.63
COL4A5P29400 MIR1255B2-201ENST00000408618 67 ntBASIC-1.41□□□□□ -2.63
COL4A5P29400 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.41□□□□□ -2.63
COL4A5P29400 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.41□□□□□ -2.63
COL4A5P29400 MIR5683-201ENST00000636514 76 ntBASIC-1.41□□□□□ -2.63
COL4A5P29400 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.42□□□□□ -2.64
COL4A5P29400 RNU6-635P-201ENST00000516651 102 ntBASIC-1.42□□□□□ -2.64
COL4A5P29400 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.42□□□□□ -2.64
COL4A5P29400 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.42□□□□□ -2.64
COL4A5P29400 RNU6-239P-201ENST00000390990 99 ntBASIC-1.42□□□□□ -2.64
COL4A5P29400 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.42□□□□□ -2.64
COL4A5P29400 RBMX2P4-201ENST00000441256 376 ntBASIC-1.42□□□□□ -2.64
COL4A5P29400 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.42□□□□□ -2.64
COL4A5P29400 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.42□□□□□ -2.64
COL4A5P29400 MIR4680-201ENST00000580906 66 ntBASIC-1.42□□□□□ -2.64
COL4A5P29400 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.43□□□□□ -2.64
COL4A5P29400 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.43□□□□□ -2.64
COL4A5P29400 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.43□□□□□ -2.64
COL4A5P29400 SNORA19.1-201ENST00000410656 129 ntBASIC-1.43□□□□□ -2.64
COL4A5P29400 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.43□□□□□ -2.64
COL4A5P29400 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.44□□□□□ -2.64
COL4A5P29400 MT-TW-201ENST00000387382 68 ntBASIC-1.44□□□□□ -2.64
COL4A5P29400 AC130289.1-201ENST00000577321 73 ntBASIC-1.44□□□□□ -2.64
COL4A5P29400 MIR6509-201ENST00000614603 85 ntBASIC-1.45□□□□□ -2.64
COL4A5P29400 MIR8062-201ENST00000621515 85 ntBASIC-1.45□□□□□ -2.64
COL4A5P29400 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.45□□□□□ -2.64
COL4A5P29400 MIR548D2-201ENST00000384955 97 ntBASIC-1.45□□□□□ -2.64
COL4A5P29400 MIR519A2-201ENST00000384990 87 ntBASIC-1.45□□□□□ -2.64
COL4A5P29400 MIR1263-201ENST00000408324 86 ntBASIC-1.45□□□□□ -2.64
COL4A5P29400 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.45□□□□□ -2.64
COL4A5P29400 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.45□□□□□ -2.64
COL4A5P29400 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.45□□□□□ -2.64
COL4A5P29400 RNU4-40P-201ENST00000364351 143 ntBASIC-1.46□□□□□ -2.64
COL4A5P29400 RNU7-88P-201ENST00000458752 63 ntBASIC-1.46□□□□□ -2.64
COL4A5P29400 MIR3171-201ENST00000584270 74 ntBASIC-1.46□□□□□ -2.64
COL4A5P29400 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.46□□□□□ -2.64
COL4A5P29400 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.46□□□□□ -2.64
COL4A5P29400 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.47□□□□□ -2.64
COL4A5P29400 SNORA33.2-201ENST00000365413 134 ntBASIC-1.47□□□□□ -2.64
COL4A5P29400 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.47□□□□□ -2.64
COL4A5P29400 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.47□□□□□ -2.64
COL4A5P29400 MIR548A1-201ENST00000385041 97 ntBASIC-1.47□□□□□ -2.64
COL4A5P29400 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.47□□□□□ -2.64
COL4A5P29400 MIR3123-201ENST00000583417 75 ntBASIC-1.47□□□□□ -2.64
COL4A5P29400 AC006254.2-201ENST00000603259 279 ntBASIC-1.47□□□□□ -2.64
COL4A5P29400 AL691482.2-201ENST00000457453 84 ntBASIC-1.48□□□□□ -2.65
COL4A5P29400 MIR4748-201ENST00000578076 82 ntBASIC-1.48□□□□□ -2.65
COL4A5P29400 MIR3140-201ENST00000583685 90 ntBASIC-1.48□□□□□ -2.65
COL4A5P29400 MIR548Z-201ENST00000584743 97 ntBASIC-1.48□□□□□ -2.65
COL4A5P29400 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.48□□□□□ -2.65
COL4A5P29400 RNU6-990P-201ENST00000364385 104 ntBASIC-1.48□□□□□ -2.65
COL4A5P29400 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.48□□□□□ -2.65
COL4A5P29400 AL035461.1-201ENST00000421490 332 ntBASIC-1.48□□□□□ -2.65
COL4A5P29400 SNORD127-201ENST00000458892 86 ntBASIC-1.48□□□□□ -2.65
COL4A5P29400 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.48□□□□□ -2.65
COL4A5P29400 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.49□□□□□ -2.65
COL4A5P29400 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.49□□□□□ -2.65
COL4A5P29400 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.49□□□□□ -2.65
COL4A5P29400 RNU6-918P-201ENST00000391219 106 ntBASIC-1.49□□□□□ -2.65
COL4A5P29400 AC120024.2-201ENST00000576526 175 ntBASIC-1.49□□□□□ -2.65
COL4A5P29400 AL160413.1-201ENST00000622780 310 ntBASIC-1.49□□□□□ -2.65
COL4A5P29400 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.5□□□□□ -2.65
COL4A5P29400 MT-TM-201ENST00000387377 68 ntBASIC-1.5□□□□□ -2.65
COL4A5P29400 MIR548Q-201ENST00000408404 100 ntBASIC-1.5□□□□□ -2.65
COL4A5P29400 RNA5SP147-201ENST00000516493 109 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms