Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.54□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.55□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.55□□□□□ -2.82
TRAV1-2A0A0B4J238 MIR520D-201ENST00000385002 87 ntBASIC-2.55□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-238P-201ENST00000363313 106 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-275P-201ENST00000364910 107 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-806P-201ENST00000365147 105 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-696P-201ENST00000390834 107 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-823P-201ENST00000391042 103 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 SNORA18.5-201ENST00000516616 101 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 SNORA40.15-201ENST00000516884 107 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.56□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-563P-201ENST00000364872 108 ntBASIC-2.57□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.57□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.57□□□□□ -2.82
TRAV1-2A0A0B4J238 MIR548I1-201ENST00000408810 149 ntBASIC-2.57□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.57□□□□□ -2.82
TRAV1-2A0A0B4J238 MIR548Z-201ENST00000584743 97 ntBASIC-2.57□□□□□ -2.82
TRAV1-2A0A0B4J238 U6.81-201ENST00000612550 106 ntBASIC-2.57□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.58□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-832P-201ENST00000363319 107 ntBASIC-2.58□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.58□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.59□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-458P-201ENST00000384179 107 ntBASIC-2.59□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-258P-201ENST00000390884 101 ntBASIC-2.59□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.59□□□□□ -2.82
TRAV1-2A0A0B4J238 RNU6-807P-201ENST00000516805 107 ntBASIC-2.59□□□□□ -2.82
TRAV1-2A0A0B4J238 U6.58-201ENST00000613107 107 ntBASIC-2.59□□□□□ -2.82
TRAV1-2A0A0B4J238 U2.14-201ENST00000615943 113 ntBASIC-2.59□□□□□ -2.82
TRAV1-2A0A0B4J238 U2.7-201ENST00000619197 100 ntBASIC-2.59□□□□□ -2.82
TRAV1-2A0A0B4J238 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.6□□□□□ -2.83
TRAV1-2A0A0B4J238 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.6□□□□□ -2.83
TRAV1-2A0A0B4J238 MTND5P22-201ENST00000458380 195 ntBASIC-2.6□□□□□ -2.83
TRAV1-2A0A0B4J238 RNY3P16-201ENST00000516338 101 ntBASIC-2.6□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.6□□□□□ -2.83
TRAV1-2A0A0B4J238 MIR6844-201ENST00000637122 62 ntBASIC-2.6□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU5F-1-201ENST00000362507 117 ntBASIC-2.61□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU6-644P-201ENST00000391155 98 ntBASIC-2.61□□□□□ -2.83
TRAV1-2A0A0B4J238 AC069439.1-201ENST00000494739 167 ntBASIC-2.61□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU6-656P-201ENST00000516785 107 ntBASIC-2.61□□□□□ -2.83
TRAV1-2A0A0B4J238 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.61□□□□□ -2.83
TRAV1-2A0A0B4J238 MIR3974-201ENST00000637126 96 ntBASIC-2.61□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU6-450P-201ENST00000364654 107 ntBASIC-2.62□□□□□ -2.83
TRAV1-2A0A0B4J238 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.62□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.62□□□□□ -2.83
TRAV1-2A0A0B4J238 MIR3646-201ENST00000578301 84 ntBASIC-2.62□□□□□ -2.83
TRAV1-2A0A0B4J238 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.63□□□□□ -2.83
TRAV1-2A0A0B4J238 MIR1277-201ENST00000408536 78 ntBASIC-2.63□□□□□ -2.83
TRAV1-2A0A0B4J238 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.63□□□□□ -2.83
TRAV1-2A0A0B4J238 U4.5-201ENST00000617137 123 ntBASIC-2.63□□□□□ -2.83
TRAV1-2A0A0B4J238 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.64□□□□□ -2.83
TRAV1-2A0A0B4J238 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.64□□□□□ -2.83
TRAV1-2A0A0B4J238 MIR577-201ENST00000385196 96 ntBASIC-2.64□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU6-816P-201ENST00000390914 107 ntBASIC-2.64□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.64□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.64□□□□□ -2.83
TRAV1-2A0A0B4J238 RNA5SP136-201ENST00000410906 107 ntBASIC-2.64□□□□□ -2.83
TRAV1-2A0A0B4J238 AL118496.2-201ENST00000448300 230 ntBASIC-2.64□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.64□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU6-415P-201ENST00000516252 97 ntBASIC-2.64□□□□□ -2.83
TRAV1-2A0A0B4J238 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.65□□□□□ -2.83
TRAV1-2A0A0B4J238 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.65□□□□□ -2.83
TRAV1-2A0A0B4J238 RNU6-493P-201ENST00000391321 108 ntBASIC-2.65□□□□□ -2.83
TRAV1-2A0A0B4J238 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.65□□□□□ -2.83
TRAV1-2A0A0B4J238 Y_RNA.51-201ENST00000362725 102 ntBASIC-2.66□□□□□ -2.84
TRAV1-2A0A0B4J238 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.66□□□□□ -2.84
TRAV1-2A0A0B4J238 RNU6-277P-201ENST00000516272 106 ntBASIC-2.66□□□□□ -2.84
TRAV1-2A0A0B4J238 RNU6-752P-201ENST00000516376 102 ntBASIC-2.66□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.717-201ENST00000517106 92 ntBASIC-2.66□□□□□ -2.84
TRAV1-2A0A0B4J238 MIR4439-201ENST00000583746 80 ntBASIC-2.66□□□□□ -2.84
TRAV1-2A0A0B4J238 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.66□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.67□□□□□ -2.84
TRAV1-2A0A0B4J238 RNU6-519P-201ENST00000410590 108 ntBASIC-2.67□□□□□ -2.84
TRAV1-2A0A0B4J238 MIR3121-201ENST00000579680 77 ntBASIC-2.67□□□□□ -2.84
TRAV1-2A0A0B4J238 MIR466-201ENST00000580653 84 ntBASIC-2.67□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.68□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.68□□□□□ -2.84
TRAV1-2A0A0B4J238 MIR548P-201ENST00000408336 84 ntBASIC-2.68□□□□□ -2.84
TRAV1-2A0A0B4J238 RNU6-101P-201ENST00000410323 104 ntBASIC-2.68□□□□□ -2.84
TRAV1-2A0A0B4J238 MTND1P19-201ENST00000511780 315 ntBASIC-2.68□□□□□ -2.84
TRAV1-2A0A0B4J238 MIR4748-201ENST00000578076 82 ntBASIC-2.68□□□□□ -2.84
TRAV1-2A0A0B4J238 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.68□□□□□ -2.84
TRAV1-2A0A0B4J238 RNU6-598P-201ENST00000364017 105 ntBASIC-2.69□□□□□ -2.84
TRAV1-2A0A0B4J238 MIR548A3-201ENST00000385297 97 ntBASIC-2.69□□□□□ -2.84
TRAV1-2A0A0B4J238 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.69□□□□□ -2.84
TRAV1-2A0A0B4J238 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.69□□□□□ -2.84
TRAV1-2A0A0B4J238 MIR4643-201ENST00000577473 78 ntBASIC-2.69□□□□□ -2.84
TRAV1-2A0A0B4J238 MIR4694-201ENST00000578534 80 ntBASIC-2.69□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.7□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.7□□□□□ -2.84
TRAV1-2A0A0B4J238 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.7□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.7□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.71□□□□□ -2.84
TRAV1-2A0A0B4J238 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.71□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 244 ms