Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 RNU7-161P-201ENST00000517289 62 ntBASIC1.6□□□□□ -2.15
LEMD3Q9Y2U8 NAMPTP3-201ENST00000569273 224 ntBASIC1.6□□□□□ -2.15
LEMD3Q9Y2U8 MIR3920-201ENST00000581751 86 ntBASIC1.6□□□□□ -2.15
LEMD3Q9Y2U8 RMST_2.1-201ENST00000617263 136 ntBASIC1.6□□□□□ -2.15
LEMD3Q9Y2U8 AC103706.3-201ENST00000636297 85 ntBASIC1.6□□□□□ -2.15
LEMD3Q9Y2U8 SNORD115-24-201ENST00000363528 82 ntBASIC1.59□□□□□ -2.15
LEMD3Q9Y2U8 RNU6-1187P-201ENST00000364771 110 ntBASIC1.59□□□□□ -2.15
LEMD3Q9Y2U8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
LEMD3Q9Y2U8 SNORD75.2-201ENST00000408784 58 ntBASIC1.59□□□□□ -2.15
LEMD3Q9Y2U8 AL691482.2-201ENST00000457453 84 ntBASIC1.59□□□□□ -2.15
LEMD3Q9Y2U8 RNU6-977P-201ENST00000516411 103 ntBASIC1.59□□□□□ -2.15
LEMD3Q9Y2U8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.58□□□□□ -2.16
LEMD3Q9Y2U8 RNU6-495P-201ENST00000362995 107 ntBASIC1.58□□□□□ -2.16
LEMD3Q9Y2U8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.58□□□□□ -2.16
LEMD3Q9Y2U8 RNU6-1039P-201ENST00000383931 107 ntBASIC1.57□□□□□ -2.16
LEMD3Q9Y2U8 MIR203A-201ENST00000384836 110 ntBASIC1.57□□□□□ -2.16
LEMD3Q9Y2U8 RNU1-119P-201ENST00000391122 165 ntBASIC1.57□□□□□ -2.16
LEMD3Q9Y2U8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
LEMD3Q9Y2U8 RNA5SP327-201ENST00000362494 101 ntBASIC1.56□□□□□ -2.16
LEMD3Q9Y2U8 MIR633-201ENST00000384821 98 ntBASIC1.56□□□□□ -2.16
LEMD3Q9Y2U8 MIR100-201ENST00000385259 80 ntBASIC1.56□□□□□ -2.16
LEMD3Q9Y2U8 RNU6-994P-201ENST00000410507 111 ntBASIC1.56□□□□□ -2.16
LEMD3Q9Y2U8 RNU7-24P-201ENST00000458867 62 ntBASIC1.56□□□□□ -2.16
LEMD3Q9Y2U8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.56□□□□□ -2.16
LEMD3Q9Y2U8 RNA5SP61-201ENST00000516453 100 ntBASIC1.56□□□□□ -2.16
LEMD3Q9Y2U8 MIR7974-201ENST00000615835 79 ntBASIC1.56□□□□□ -2.16
LEMD3Q9Y2U8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LEMD3Q9Y2U8 RNU6-669P-201ENST00000365575 107 ntBASIC1.55□□□□□ -2.16
LEMD3Q9Y2U8 MIR758-201ENST00000390227 88 ntBASIC1.55□□□□□ -2.16
LEMD3Q9Y2U8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LEMD3Q9Y2U8 SNORA25.8-201ENST00000364831 128 ntBASIC1.54□□□□□ -2.16
LEMD3Q9Y2U8 RNU6-54P-201ENST00000365563 107 ntBASIC1.54□□□□□ -2.16
LEMD3Q9Y2U8 Y_RNA.540-201ENST00000384638 111 ntBASIC1.54□□□□□ -2.16
LEMD3Q9Y2U8 MIR520F-201ENST00000384824 87 ntBASIC1.54□□□□□ -2.16
LEMD3Q9Y2U8 MIR519E-201ENST00000385075 84 ntBASIC1.54□□□□□ -2.16
LEMD3Q9Y2U8 RNU7-104P-201ENST00000459398 79 ntBASIC1.54□□□□□ -2.16
LEMD3Q9Y2U8 MIR6509-201ENST00000614603 85 ntBASIC1.54□□□□□ -2.16
LEMD3Q9Y2U8 MIR548O2-201ENST00000616090 70 ntBASIC1.54□□□□□ -2.16
LEMD3Q9Y2U8 SNORD114-22-201ENST00000365423 72 ntBASIC1.53□□□□□ -2.16
LEMD3Q9Y2U8 MIR617-201ENST00000385030 97 ntBASIC1.53□□□□□ -2.16
LEMD3Q9Y2U8 SNORD42B-201ENST00000458893 67 ntBASIC1.53□□□□□ -2.16
LEMD3Q9Y2U8 AC069503.3-201ENST00000618674 145 ntBASIC1.53□□□□□ -2.16
LEMD3Q9Y2U8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
LEMD3Q9Y2U8 MIR1-1-201ENST00000362147 71 ntBASIC1.52□□□□□ -2.17
LEMD3Q9Y2U8 AC079150.2-201ENST00000443733 78 ntBASIC1.52□□□□□ -2.17
LEMD3Q9Y2U8 AL136317.1-201ENST00000612653 226 ntBASIC1.52□□□□□ -2.17
LEMD3Q9Y2U8 Y_RNA.174-201ENST00000363781 105 ntBASIC1.51□□□□□ -2.17
LEMD3Q9Y2U8 MIR19B1-201ENST00000384829 87 ntBASIC1.51□□□□□ -2.17
LEMD3Q9Y2U8 AC067940.1-201ENST00000458411 300 ntBASIC1.51□□□□□ -2.17
LEMD3Q9Y2U8 SNORA40.17-201ENST00000517256 115 ntBASIC1.51□□□□□ -2.17
LEMD3Q9Y2U8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
LEMD3Q9Y2U8 MIR96-201ENST00000362288 78 ntBASIC1.5□□□□□ -2.17
LEMD3Q9Y2U8 MIR644A-201ENST00000385262 94 ntBASIC1.5□□□□□ -2.17
LEMD3Q9Y2U8 MIR1827-201ENST00000408549 66 ntBASIC1.5□□□□□ -2.17
LEMD3Q9Y2U8 AC002429.1-201ENST00000437672 148 ntBASIC1.5□□□□□ -2.17
LEMD3Q9Y2U8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.5□□□□□ -2.17
LEMD3Q9Y2U8 AC068338.1-201ENST00000565567 176 ntBASIC1.5□□□□□ -2.17
LEMD3Q9Y2U8 MIR3657-201ENST00000584818 117 ntBASIC1.5□□□□□ -2.17
LEMD3Q9Y2U8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.5□□□□□ -2.17
LEMD3Q9Y2U8 AC073869.9-201ENST00000641610 120 ntBASIC1.5□□□□□ -2.17
LEMD3Q9Y2U8 RNU6-668P-201ENST00000364180 107 ntBASIC1.49□□□□□ -2.17
LEMD3Q9Y2U8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.49□□□□□ -2.17
LEMD3Q9Y2U8 MIR6515-201ENST00000619843 57 ntBASIC1.49□□□□□ -2.17
LEMD3Q9Y2U8 MIR26B-201ENST00000362251 77 ntBASIC1.48□□□□□ -2.17
LEMD3Q9Y2U8 Y_RNA.375-201ENST00000365625 101 ntBASIC1.48□□□□□ -2.17
LEMD3Q9Y2U8 RNU6V-201ENST00000384105 107 ntBASIC1.48□□□□□ -2.17
LEMD3Q9Y2U8 MIR200A-201ENST00000384875 90 ntBASIC1.48□□□□□ -2.17
LEMD3Q9Y2U8 MIR618-201ENST00000385287 98 ntBASIC1.48□□□□□ -2.17
LEMD3Q9Y2U8 AC092634.7-201ENST00000621022 103 ntBASIC1.48□□□□□ -2.17
LEMD3Q9Y2U8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LEMD3Q9Y2U8 RNU6-645P-201ENST00000364649 106 ntBASIC1.47□□□□□ -2.17
LEMD3Q9Y2U8 MIR216B-201ENST00000390186 82 ntBASIC1.47□□□□□ -2.17
LEMD3Q9Y2U8 MTND4LP1-201ENST00000446263 157 ntBASIC1.47□□□□□ -2.17
LEMD3Q9Y2U8 AC002350.1-201ENST00000490759 375 ntBASIC1.47□□□□□ -2.17
LEMD3Q9Y2U8 AC067863.3-201ENST00000624172 122 ntBASIC1.47□□□□□ -2.17
LEMD3Q9Y2U8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
LEMD3Q9Y2U8 SNORD114-26-201ENST00000363543 72 ntBASIC1.46□□□□□ -2.18
LEMD3Q9Y2U8 RNA5SP325-201ENST00000363756 130 ntBASIC1.46□□□□□ -2.18
LEMD3Q9Y2U8 RNU1-124P-201ENST00000363861 145 ntBASIC1.46□□□□□ -2.18
LEMD3Q9Y2U8 RNU1-93P-201ENST00000364704 169 ntBASIC1.46□□□□□ -2.18
LEMD3Q9Y2U8 RNU6-260P-201ENST00000384092 107 ntBASIC1.46□□□□□ -2.18
LEMD3Q9Y2U8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
LEMD3Q9Y2U8 RNU6-990P-201ENST00000364385 104 ntBASIC1.45□□□□□ -2.18
LEMD3Q9Y2U8 FABP5P4-201ENST00000437203 171 ntBASIC1.45□□□□□ -2.18
LEMD3Q9Y2U8 MIR6779-201ENST00000617283 64 ntBASIC1.45□□□□□ -2.18
LEMD3Q9Y2U8 RNU6-829P-201ENST00000363700 112 ntBASIC1.44□□□□□ -2.18
LEMD3Q9Y2U8 RNU6-141P-201ENST00000410499 105 ntBASIC1.44□□□□□ -2.18
LEMD3Q9Y2U8 RNU6-542P-201ENST00000516405 103 ntBASIC1.44□□□□□ -2.18
LEMD3Q9Y2U8 RNA5SP404-201ENST00000517118 132 ntBASIC1.44□□□□□ -2.18
LEMD3Q9Y2U8 AC022709.1-201ENST00000615967 87 ntBASIC1.44□□□□□ -2.18
LEMD3Q9Y2U8 AC244669.1-204ENST00000621564 178 ntBASIC1.44□□□□□ -2.18
LEMD3Q9Y2U8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
LEMD3Q9Y2U8 RNU6-614P-201ENST00000384369 107 ntBASIC1.43□□□□□ -2.18
LEMD3Q9Y2U8 SNORD41.1-201ENST00000391000 69 ntBASIC1.43□□□□□ -2.18
LEMD3Q9Y2U8 RNA5SP147-201ENST00000516493 109 ntBASIC1.43□□□□□ -2.18
LEMD3Q9Y2U8 U6.59-201ENST00000615686 107 ntBASIC1.43□□□□□ -2.18
LEMD3Q9Y2U8 RNU6-1079P-201ENST00000362861 110 ntBASIC1.42□□□□□ -2.18
LEMD3Q9Y2U8 RNA5SP192-201ENST00000364404 120 ntBASIC1.42□□□□□ -2.18
LEMD3Q9Y2U8 SNORD28-201ENST00000384706 75 ntBASIC1.42□□□□□ -2.18
LEMD3Q9Y2U8 RNU6-656P-201ENST00000516785 107 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms