Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MIR548H3-201ENST00000408771 118 ntBASIC-1.36□□□□□ -2.63
CISHQ9NSE2 RNU2-51P-201ENST00000410708 197 ntBASIC-1.36□□□□□ -2.63
CISHQ9NSE2 RNU6-924P-201ENST00000362926 108 ntBASIC-1.37□□□□□ -2.63
CISHQ9NSE2 RNU4-40P-201ENST00000364351 143 ntBASIC-1.37□□□□□ -2.63
CISHQ9NSE2 SNORD115-22-201ENST00000364456 82 ntBASIC-1.37□□□□□ -2.63
CISHQ9NSE2 SNORA33.1-201ENST00000364957 130 ntBASIC-1.37□□□□□ -2.63
CISHQ9NSE2 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.37□□□□□ -2.63
CISHQ9NSE2 SNORD58.1-201ENST00000391313 66 ntBASIC-1.37□□□□□ -2.63
CISHQ9NSE2 MIR1255B2-201ENST00000408618 67 ntBASIC-1.37□□□□□ -2.63
CISHQ9NSE2 MTND2P23-201ENST00000422990 651 ntBASIC-1.37□□□□□ -2.63
CISHQ9NSE2 snoU13.17-201ENST00000458802 104 ntBASIC-1.37□□□□□ -2.63
CISHQ9NSE2 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.37□□□□□ -2.63
CISHQ9NSE2 MIR3064-201ENST00000581130 66 ntBASIC-1.37□□□□□ -2.63
CISHQ9NSE2 MIR409-201ENST00000362237 79 ntBASIC-1.38□□□□□ -2.63
CISHQ9NSE2 RNA5SP26-201ENST00000362406 119 ntBASIC-1.38□□□□□ -2.63
CISHQ9NSE2 RNU6-576P-201ENST00000390854 102 ntBASIC-1.38□□□□□ -2.63
CISHQ9NSE2 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.38□□□□□ -2.63
CISHQ9NSE2 HAR1A.1-201ENST00000459583 118 ntBASIC-1.38□□□□□ -2.63
CISHQ9NSE2 AL513043.2-201ENST00000573941 143 ntBASIC-1.38□□□□□ -2.63
CISHQ9NSE2 AC134503.1-201ENST00000633048 54 ntBASIC-1.38□□□□□ -2.63
CISHQ9NSE2 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.39□□□□□ -2.63
CISHQ9NSE2 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.39□□□□□ -2.63
CISHQ9NSE2 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.39□□□□□ -2.63
CISHQ9NSE2 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.39□□□□□ -2.63
CISHQ9NSE2 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.39□□□□□ -2.63
CISHQ9NSE2 RNU6-239P-201ENST00000390990 99 ntBASIC-1.39□□□□□ -2.63
CISHQ9NSE2 RNA5SP136-201ENST00000410906 107 ntBASIC-1.39□□□□□ -2.63
CISHQ9NSE2 HLA-S-202ENST00000425174 53 ntBASIC-1.39□□□□□ -2.63
CISHQ9NSE2 RNA5SP180-201ENST00000516181 101 ntBASIC-1.39□□□□□ -2.63
CISHQ9NSE2 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 RNU6-226P-201ENST00000363778 107 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 SNORD90-201ENST00000391145 111 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 MIR889-201ENST00000401280 79 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 RNA5SP266-201ENST00000410273 108 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 RNU4-61P-201ENST00000411243 107 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 MTND5P20-201ENST00000448677 143 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 AC130289.1-201ENST00000577321 73 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 AC104996.3-201ENST00000590718 94 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 AL160413.1-201ENST00000622780 310 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 U6.104-201ENST00000637979 90 ntBASIC-1.4□□□□□ -2.63
CISHQ9NSE2 RNU6-382P-201ENST00000365181 106 ntBASIC-1.41□□□□□ -2.64
CISHQ9NSE2 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.41□□□□□ -2.64
CISHQ9NSE2 RNU6-260P-201ENST00000384092 107 ntBASIC-1.41□□□□□ -2.64
CISHQ9NSE2 MIR548U-201ENST00000390728 81 ntBASIC-1.41□□□□□ -2.64
CISHQ9NSE2 RNU6-816P-201ENST00000390914 107 ntBASIC-1.41□□□□□ -2.64
CISHQ9NSE2 SNORD37.2-201ENST00000391075 66 ntBASIC-1.41□□□□□ -2.64
CISHQ9NSE2 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.41□□□□□ -2.64
CISHQ9NSE2 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.41□□□□□ -2.64
CISHQ9NSE2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.41□□□□□ -2.64
CISHQ9NSE2 RNU7-197P-201ENST00000458836 62 ntBASIC-1.41□□□□□ -2.64
CISHQ9NSE2 CYP3A54P-201ENST00000566950 75 ntBASIC-1.41□□□□□ -2.64
CISHQ9NSE2 MIR3171-201ENST00000584270 74 ntBASIC-1.41□□□□□ -2.64
CISHQ9NSE2 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 RNU6-151P-201ENST00000364158 107 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 MIR577-201ENST00000385196 96 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 MT-TD-201ENST00000387419 68 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 MIR1263-201ENST00000408324 86 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 RNU2-38P-201ENST00000410856 79 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 RNA5SP147-201ENST00000516493 109 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 AC020661.2-201ENST00000560114 134 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.42□□□□□ -2.64
CISHQ9NSE2 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.43□□□□□ -2.64
CISHQ9NSE2 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.43□□□□□ -2.64
CISHQ9NSE2 RNU6-635P-201ENST00000516651 102 ntBASIC-1.43□□□□□ -2.64
CISHQ9NSE2 AC091912.2-201ENST00000624798 167 ntBASIC-1.43□□□□□ -2.64
CISHQ9NSE2 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.44□□□□□ -2.64
CISHQ9NSE2 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.44□□□□□ -2.64
CISHQ9NSE2 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.44□□□□□ -2.64
CISHQ9NSE2 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.44□□□□□ -2.64
CISHQ9NSE2 SNORD4B-201ENST00000459083 72 ntBASIC-1.44□□□□□ -2.64
CISHQ9NSE2 AC006254.2-201ENST00000603259 279 ntBASIC-1.44□□□□□ -2.64
CISHQ9NSE2 MIR6502-201ENST00000617296 76 ntBASIC-1.44□□□□□ -2.64
CISHQ9NSE2 SNORA2.1-201ENST00000363089 137 ntBASIC-1.45□□□□□ -2.64
CISHQ9NSE2 RNU6-238P-201ENST00000363313 106 ntBASIC-1.45□□□□□ -2.64
CISHQ9NSE2 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.45□□□□□ -2.64
CISHQ9NSE2 RNA5SP292-201ENST00000390974 118 ntBASIC-1.45□□□□□ -2.64
CISHQ9NSE2 AL353691.2-201ENST00000443795 59 ntBASIC-1.45□□□□□ -2.64
CISHQ9NSE2 RNU7-154P-201ENST00000516194 62 ntBASIC-1.45□□□□□ -2.64
CISHQ9NSE2 RNU6-62P-201ENST00000516526 102 ntBASIC-1.45□□□□□ -2.64
CISHQ9NSE2 MIR5591-201ENST00000578248 65 ntBASIC-1.45□□□□□ -2.64
CISHQ9NSE2 MIR3657-201ENST00000584818 117 ntBASIC-1.45□□□□□ -2.64
CISHQ9NSE2 RNU6-824P-201ENST00000363724 104 ntBASIC-1.46□□□□□ -2.64
CISHQ9NSE2 RNU6-164P-201ENST00000364604 103 ntBASIC-1.46□□□□□ -2.64
CISHQ9NSE2 RNU6-915P-201ENST00000364943 103 ntBASIC-1.46□□□□□ -2.64
CISHQ9NSE2 MIR203A-201ENST00000384836 110 ntBASIC-1.46□□□□□ -2.64
CISHQ9NSE2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
CISHQ9NSE2 RNU6-460P-201ENST00000391158 108 ntBASIC-1.46□□□□□ -2.64
CISHQ9NSE2 MTATP8P1-201ENST00000467115 207 ntBASIC-1.46□□□□□ -2.64
CISHQ9NSE2 MIR6129-201ENST00000616087 109 ntBASIC-1.46□□□□□ -2.64
CISHQ9NSE2 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms