Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 MT-TW-201ENST00000387382 68 ntBASIC-2.45□□□□□ -2.8
VPS25Q9BRG1 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.45□□□□□ -2.8
VPS25Q9BRG1 MIR3064-201ENST00000581130 66 ntBASIC-2.45□□□□□ -2.8
VPS25Q9BRG1 MIR6509-201ENST00000614603 85 ntBASIC-2.45□□□□□ -2.8
VPS25Q9BRG1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.45□□□□□ -2.8
VPS25Q9BRG1 MIR4773-1-201ENST00000637203 78 ntBASIC-2.45□□□□□ -2.8
VPS25Q9BRG1 RNY1P11-201ENST00000363759 113 ntBASIC-2.46□□□□□ -2.8
VPS25Q9BRG1 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.46□□□□□ -2.8
VPS25Q9BRG1 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.46□□□□□ -2.8
VPS25Q9BRG1 RNU6-246P-201ENST00000384702 107 ntBASIC-2.46□□□□□ -2.8
VPS25Q9BRG1 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.46□□□□□ -2.8
VPS25Q9BRG1 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.46□□□□□ -2.8
VPS25Q9BRG1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.46□□□□□ -2.8
VPS25Q9BRG1 U6.106-201ENST00000636360 105 ntBASIC-2.46□□□□□ -2.8
VPS25Q9BRG1 RNU6-363P-201ENST00000362895 105 ntBASIC-2.47□□□□□ -2.8
VPS25Q9BRG1 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.47□□□□□ -2.8
VPS25Q9BRG1 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.47□□□□□ -2.8
VPS25Q9BRG1 RNU6-823P-201ENST00000391042 103 ntBASIC-2.47□□□□□ -2.8
VPS25Q9BRG1 MIR548Q-201ENST00000408404 100 ntBASIC-2.47□□□□□ -2.8
VPS25Q9BRG1 MIR548F1-201ENST00000408667 84 ntBASIC-2.47□□□□□ -2.8
VPS25Q9BRG1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.47□□□□□ -2.8
VPS25Q9BRG1 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.47□□□□□ -2.8
VPS25Q9BRG1 AL442128.1-201ENST00000615151 90 ntBASIC-2.47□□□□□ -2.8
VPS25Q9BRG1 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.48□□□□□ -2.81
VPS25Q9BRG1 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.48□□□□□ -2.81
VPS25Q9BRG1 MIR1277-201ENST00000408536 78 ntBASIC-2.48□□□□□ -2.81
VPS25Q9BRG1 RNU7-152P-201ENST00000458982 64 ntBASIC-2.48□□□□□ -2.81
VPS25Q9BRG1 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.48□□□□□ -2.81
VPS25Q9BRG1 MIR4282-201ENST00000583613 67 ntBASIC-2.48□□□□□ -2.81
VPS25Q9BRG1 AL132765.2-201ENST00000610812 351 ntBASIC-2.48□□□□□ -2.81
VPS25Q9BRG1 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.49□□□□□ -2.81
VPS25Q9BRG1 RNU6-151P-201ENST00000364158 107 ntBASIC-2.49□□□□□ -2.81
VPS25Q9BRG1 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.49□□□□□ -2.81
VPS25Q9BRG1 MIR1252-201ENST00000408861 65 ntBASIC-2.49□□□□□ -2.81
VPS25Q9BRG1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.49□□□□□ -2.81
VPS25Q9BRG1 AC104996.3-201ENST00000590718 94 ntBASIC-2.49□□□□□ -2.81
VPS25Q9BRG1 AC006254.2-201ENST00000603259 279 ntBASIC-2.49□□□□□ -2.81
VPS25Q9BRG1 RNU6-79P-201ENST00000362511 107 ntBASIC-2.5□□□□□ -2.81
VPS25Q9BRG1 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.5□□□□□ -2.81
VPS25Q9BRG1 RNU6-312P-201ENST00000364629 107 ntBASIC-2.5□□□□□ -2.81
VPS25Q9BRG1 MIR548U-201ENST00000390728 81 ntBASIC-2.5□□□□□ -2.81
VPS25Q9BRG1 RNU6-493P-201ENST00000391321 108 ntBASIC-2.5□□□□□ -2.81
VPS25Q9BRG1 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.5□□□□□ -2.81
VPS25Q9BRG1 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.5□□□□□ -2.81
VPS25Q9BRG1 MIR664B-201ENST00000626756 61 ntBASIC-2.5□□□□□ -2.81
VPS25Q9BRG1 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.51□□□□□ -2.81
VPS25Q9BRG1 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.51□□□□□ -2.81
VPS25Q9BRG1 RNU6-277P-201ENST00000516272 106 ntBASIC-2.51□□□□□ -2.81
VPS25Q9BRG1 AL513043.2-201ENST00000573941 143 ntBASIC-2.51□□□□□ -2.81
VPS25Q9BRG1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.51□□□□□ -2.81
VPS25Q9BRG1 RNU6-824P-201ENST00000363724 104 ntBASIC-2.52□□□□□ -2.81
VPS25Q9BRG1 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.52□□□□□ -2.81
VPS25Q9BRG1 RNU6-409P-201ENST00000384114 104 ntBASIC-2.52□□□□□ -2.81
VPS25Q9BRG1 MIR4756-201ENST00000577874 78 ntBASIC-2.52□□□□□ -2.81
VPS25Q9BRG1 MIR3149-201ENST00000584629 83 ntBASIC-2.52□□□□□ -2.81
VPS25Q9BRG1 U2.14-201ENST00000615943 113 ntBASIC-2.52□□□□□ -2.81
VPS25Q9BRG1 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.53□□□□□ -2.81
VPS25Q9BRG1 SNORD18B-201ENST00000365659 72 ntBASIC-2.53□□□□□ -2.81
VPS25Q9BRG1 MIR521-2-201ENST00000384818 87 ntBASIC-2.53□□□□□ -2.81
VPS25Q9BRG1 RNA5SP292-201ENST00000390974 118 ntBASIC-2.53□□□□□ -2.81
VPS25Q9BRG1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.54□□□□□ -2.82
VPS25Q9BRG1 SNORA75.5-201ENST00000391291 81 ntBASIC-2.54□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.55□□□□□ -2.82
VPS25Q9BRG1 RNU6-275P-201ENST00000364910 107 ntBASIC-2.55□□□□□ -2.82
VPS25Q9BRG1 MIR548D2-201ENST00000384955 97 ntBASIC-2.55□□□□□ -2.82
VPS25Q9BRG1 U4.5-201ENST00000617137 123 ntBASIC-2.55□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.56□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.56□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.56□□□□□ -2.82
VPS25Q9BRG1 AL691482.2-201ENST00000457453 84 ntBASIC-2.56□□□□□ -2.82
VPS25Q9BRG1 RNU6-119P-201ENST00000364882 107 ntBASIC-2.57□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.57□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.57□□□□□ -2.82
VPS25Q9BRG1 MTND3P2-201ENST00000438452 342 ntBASIC-2.57□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.57□□□□□ -2.82
VPS25Q9BRG1 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.57□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.58□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.58□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.58□□□□□ -2.82
VPS25Q9BRG1 RNU6-101P-201ENST00000410323 104 ntBASIC-2.58□□□□□ -2.82
VPS25Q9BRG1 AL021921.1-201ENST00000442774 93 ntBASIC-2.58□□□□□ -2.82
VPS25Q9BRG1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.58□□□□□ -2.82
VPS25Q9BRG1 MIR1302-1-201ENST00000637932 143 ntBASIC-2.58□□□□□ -2.82
VPS25Q9BRG1 RNU6-478P-201ENST00000363904 110 ntBASIC-2.59□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.59□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.59□□□□□ -2.82
VPS25Q9BRG1 MIR4643-201ENST00000577473 78 ntBASIC-2.59□□□□□ -2.82
VPS25Q9BRG1 MIR6844-201ENST00000637122 62 ntBASIC-2.59□□□□□ -2.82
VPS25Q9BRG1 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.6□□□□□ -2.83
VPS25Q9BRG1 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.6□□□□□ -2.83
VPS25Q9BRG1 RNU6-608P-201ENST00000383927 104 ntBASIC-2.6□□□□□ -2.83
VPS25Q9BRG1 RNU6-695P-201ENST00000391157 104 ntBASIC-2.6□□□□□ -2.83
VPS25Q9BRG1 MIR548I1-201ENST00000408810 149 ntBASIC-2.6□□□□□ -2.83
VPS25Q9BRG1 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.6□□□□□ -2.83
VPS25Q9BRG1 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.6□□□□□ -2.83
VPS25Q9BRG1 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.61□□□□□ -2.83
VPS25Q9BRG1 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.61□□□□□ -2.83
VPS25Q9BRG1 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.61□□□□□ -2.83
VPS25Q9BRG1 SNORD4B-201ENST00000459083 72 ntBASIC-2.61□□□□□ -2.83
VPS25Q9BRG1 SNORD19B-201ENST00000459623 84 ntBASIC-2.61□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms