Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNA5SP61-201ENST00000516453 100 ntBASIC1.54□□□□□ -2.16
SHKBP1Q8TBC3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
SHKBP1Q8TBC3 RNU6-392P-201ENST00000364926 101 ntBASIC1.53□□□□□ -2.16
SHKBP1Q8TBC3 RNU6-614P-201ENST00000384369 107 ntBASIC1.53□□□□□ -2.16
SHKBP1Q8TBC3 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
SHKBP1Q8TBC3 MIR1827-201ENST00000408549 66 ntBASIC1.53□□□□□ -2.16
SHKBP1Q8TBC3 AC067940.1-201ENST00000458411 300 ntBASIC1.53□□□□□ -2.16
SHKBP1Q8TBC3 RNU6-542P-201ENST00000516405 103 ntBASIC1.53□□□□□ -2.16
SHKBP1Q8TBC3 MIR4422-201ENST00000581938 83 ntBASIC1.53□□□□□ -2.16
SHKBP1Q8TBC3 MIR3657-201ENST00000584818 117 ntBASIC1.53□□□□□ -2.16
SHKBP1Q8TBC3 U6.59-201ENST00000615686 107 ntBASIC1.53□□□□□ -2.16
SHKBP1Q8TBC3 AC092634.7-201ENST00000621022 103 ntBASIC1.53□□□□□ -2.16
SHKBP1Q8TBC3 SNORD42B-201ENST00000458893 67 ntBASIC1.52□□□□□ -2.17
SHKBP1Q8TBC3 RNU6-645P-201ENST00000364649 106 ntBASIC1.51□□□□□ -2.17
SHKBP1Q8TBC3 RNU6-902P-201ENST00000517212 91 ntBASIC1.51□□□□□ -2.17
SHKBP1Q8TBC3 RMST_2.1-201ENST00000617263 136 ntBASIC1.51□□□□□ -2.17
SHKBP1Q8TBC3 AC067863.3-201ENST00000624172 122 ntBASIC1.51□□□□□ -2.17
SHKBP1Q8TBC3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SHKBP1Q8TBC3 RNU6-829P-201ENST00000363700 112 ntBASIC1.5□□□□□ -2.17
SHKBP1Q8TBC3 RNU6-260P-201ENST00000384092 107 ntBASIC1.5□□□□□ -2.17
SHKBP1Q8TBC3 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
SHKBP1Q8TBC3 MIR499A-201ENST00000384903 122 ntBASIC1.5□□□□□ -2.17
SHKBP1Q8TBC3 AC008834.1-201ENST00000511612 175 ntBASIC1.5□□□□□ -2.17
SHKBP1Q8TBC3 AL136317.1-201ENST00000612653 226 ntBASIC1.5□□□□□ -2.17
SHKBP1Q8TBC3 RNU6V-201ENST00000384105 107 ntBASIC1.49□□□□□ -2.17
SHKBP1Q8TBC3 SNORA40.17-201ENST00000517256 115 ntBASIC1.49□□□□□ -2.17
SHKBP1Q8TBC3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.49□□□□□ -2.17
SHKBP1Q8TBC3 SNORA25.5-201ENST00000363782 126 ntBASIC1.48□□□□□ -2.17
SHKBP1Q8TBC3 MIR7-2-201ENST00000384970 110 ntBASIC1.48□□□□□ -2.17
SHKBP1Q8TBC3 RNA5SP192-201ENST00000364404 120 ntBASIC1.47□□□□□ -2.17
SHKBP1Q8TBC3 Y_RNA.236-201ENST00000364427 111 ntBASIC1.47□□□□□ -2.17
SHKBP1Q8TBC3 MIR644A-201ENST00000385262 94 ntBASIC1.47□□□□□ -2.17
SHKBP1Q8TBC3 AC002350.1-201ENST00000490759 375 ntBASIC1.47□□□□□ -2.17
SHKBP1Q8TBC3 AL353770.2-201ENST00000620024 78 ntBASIC1.47□□□□□ -2.17
SHKBP1Q8TBC3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
SHKBP1Q8TBC3 RNU6-1079P-201ENST00000362861 110 ntBASIC1.46□□□□□ -2.18
SHKBP1Q8TBC3 SNORA2.1-201ENST00000363089 137 ntBASIC1.46□□□□□ -2.18
SHKBP1Q8TBC3 SNORD41.1-201ENST00000391000 69 ntBASIC1.46□□□□□ -2.18
SHKBP1Q8TBC3 SCARNA21.1-201ENST00000515996 128 ntBASIC1.46□□□□□ -2.18
SHKBP1Q8TBC3 MT-TY-201ENST00000387409 66 ntBASIC1.45□□□□□ -2.18
SHKBP1Q8TBC3 SNORD12-201ENST00000391002 90 ntBASIC1.45□□□□□ -2.18
SHKBP1Q8TBC3 MIR1276-201ENST00000408707 83 ntBASIC1.45□□□□□ -2.18
SHKBP1Q8TBC3 RNU7-74P-201ENST00000459104 62 ntBASIC1.45□□□□□ -2.18
SHKBP1Q8TBC3 RNU6-656P-201ENST00000516785 107 ntBASIC1.45□□□□□ -2.18
SHKBP1Q8TBC3 SNORA70.22-201ENST00000517160 124 ntBASIC1.45□□□□□ -2.18
SHKBP1Q8TBC3 MIR466-201ENST00000580653 84 ntBASIC1.45□□□□□ -2.18
SHKBP1Q8TBC3 MIR4639-201ENST00000584938 69 ntBASIC1.45□□□□□ -2.18
SHKBP1Q8TBC3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
SHKBP1Q8TBC3 RNU6-990P-201ENST00000364385 104 ntBASIC1.44□□□□□ -2.18
SHKBP1Q8TBC3 SNORD28-201ENST00000384706 75 ntBASIC1.44□□□□□ -2.18
SHKBP1Q8TBC3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SHKBP1Q8TBC3 RNA5SP299-201ENST00000391203 116 ntBASIC1.44□□□□□ -2.18
SHKBP1Q8TBC3 RNU6-135P-201ENST00000516769 101 ntBASIC1.44□□□□□ -2.18
SHKBP1Q8TBC3 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
SHKBP1Q8TBC3 AC244669.1-204ENST00000621564 178 ntBASIC1.44□□□□□ -2.18
SHKBP1Q8TBC3 RNU6-940P-201ENST00000363433 104 ntBASIC1.43□□□□□ -2.18
SHKBP1Q8TBC3 RNA5SP117-201ENST00000365294 118 ntBASIC1.43□□□□□ -2.18
SHKBP1Q8TBC3 MIR6739-201ENST00000622461 75 ntBASIC1.43□□□□□ -2.18
SHKBP1Q8TBC3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SHKBP1Q8TBC3 RNA5SP215-201ENST00000363440 122 ntBASIC1.42□□□□□ -2.18
SHKBP1Q8TBC3 AC002429.1-201ENST00000437672 148 ntBASIC1.42□□□□□ -2.18
SHKBP1Q8TBC3 RNA5SP147-201ENST00000516493 109 ntBASIC1.42□□□□□ -2.18
SHKBP1Q8TBC3 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
SHKBP1Q8TBC3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.41□□□□□ -2.18
SHKBP1Q8TBC3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.18
SHKBP1Q8TBC3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SHKBP1Q8TBC3 RNU6-446P-201ENST00000362827 106 ntBASIC1.4□□□□□ -2.19
SHKBP1Q8TBC3 RNU6-726P-201ENST00000364680 107 ntBASIC1.4□□□□□ -2.19
SHKBP1Q8TBC3 RNU6-1089P-201ENST00000516473 104 ntBASIC1.4□□□□□ -2.19
SHKBP1Q8TBC3 MIR4460-201ENST00000577862 86 ntBASIC1.4□□□□□ -2.19
SHKBP1Q8TBC3 RPS29P23-201ENST00000458635 123 ntBASIC1.39□□□□□ -2.19
SHKBP1Q8TBC3 RNA5SP102-201ENST00000516865 106 ntBASIC1.39□□□□□ -2.19
SHKBP1Q8TBC3 MIR3660-201ENST00000584845 100 ntBASIC1.39□□□□□ -2.19
SHKBP1Q8TBC3 MIR6078-201ENST00000611069 100 ntBASIC1.39□□□□□ -2.19
SHKBP1Q8TBC3 MIR6504-201ENST00000613520 61 ntBASIC1.39□□□□□ -2.19
SHKBP1Q8TBC3 SNORD18A-201ENST00000363753 72 ntBASIC1.38□□□□□ -2.19
SHKBP1Q8TBC3 RNU1-141P-201ENST00000364623 158 ntBASIC1.38□□□□□ -2.19
SHKBP1Q8TBC3 RNU6-1335P-201ENST00000365426 107 ntBASIC1.38□□□□□ -2.19
SHKBP1Q8TBC3 MIR548L-201ENST00000408303 86 ntBASIC1.38□□□□□ -2.19
SHKBP1Q8TBC3 RNU6-469P-201ENST00000516253 101 ntBASIC1.38□□□□□ -2.19
SHKBP1Q8TBC3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.38□□□□□ -2.19
SHKBP1Q8TBC3 RNA5SP47-201ENST00000517230 109 ntBASIC1.38□□□□□ -2.19
SHKBP1Q8TBC3 MIR7111-201ENST00000619751 72 ntBASIC1.38□□□□□ -2.19
SHKBP1Q8TBC3 RNU6-122P-201ENST00000516818 107 ntBASIC1.37□□□□□ -2.19
SHKBP1Q8TBC3 AC018659.1-201ENST00000551083 169 ntBASIC1.37□□□□□ -2.19
SHKBP1Q8TBC3 MIR4285-201ENST00000581001 85 ntBASIC1.37□□□□□ -2.19
SHKBP1Q8TBC3 Y_RNA.250-201ENST00000364542 110 ntBASIC1.36□□□□□ -2.19
SHKBP1Q8TBC3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.36□□□□□ -2.19
SHKBP1Q8TBC3 MIR222-201ENST00000384992 110 ntBASIC1.36□□□□□ -2.19
SHKBP1Q8TBC3 SNORD105-201ENST00000386910 85 ntBASIC1.36□□□□□ -2.19
SHKBP1Q8TBC3 SNORD89-201ENST00000390981 114 ntBASIC1.36□□□□□ -2.19
SHKBP1Q8TBC3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SHKBP1Q8TBC3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.35□□□□□ -2.19
SHKBP1Q8TBC3 RNU6-716P-201ENST00000365621 103 ntBASIC1.35□□□□□ -2.19
SHKBP1Q8TBC3 RNU6-269P-201ENST00000391077 97 ntBASIC1.35□□□□□ -2.19
SHKBP1Q8TBC3 RNU6-92P-201ENST00000605893 104 ntBASIC1.35□□□□□ -2.19
SHKBP1Q8TBC3 RNU6-302P-201ENST00000365249 107 ntBASIC1.34□□□□□ -2.19
SHKBP1Q8TBC3 SNORA25-201ENST00000384384 134 ntBASIC1.34□□□□□ -2.19
SHKBP1Q8TBC3 SNORA75.1-201ENST00000391130 148 ntBASIC1.34□□□□□ -2.19
SHKBP1Q8TBC3 AL157398.1-201ENST00000452981 186 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms