Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RNU6-647P-201ENST00000364243 107 ntBASIC-1.56□□□□□ -2.66
CLHC1Q8NHS4 MIR1285-2-201ENST00000408311 88 ntBASIC-1.56□□□□□ -2.66
CLHC1Q8NHS4 YWHAEP3-201ENST00000582767 121 ntBASIC-1.56□□□□□ -2.66
CLHC1Q8NHS4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.56□□□□□ -2.66
CLHC1Q8NHS4 RNU6-495P-201ENST00000362995 107 ntBASIC-1.57□□□□□ -2.66
CLHC1Q8NHS4 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.57□□□□□ -2.66
CLHC1Q8NHS4 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.58□□□□□ -2.66
CLHC1Q8NHS4 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.59□□□□□ -2.66
CLHC1Q8NHS4 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.59□□□□□ -2.66
CLHC1Q8NHS4 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.59□□□□□ -2.66
CLHC1Q8NHS4 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.59□□□□□ -2.66
CLHC1Q8NHS4 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.59□□□□□ -2.66
CLHC1Q8NHS4 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.59□□□□□ -2.66
CLHC1Q8NHS4 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.6□□□□□ -2.67
CLHC1Q8NHS4 SNORD114-3-201ENST00000364969 75 ntBASIC-1.6□□□□□ -2.67
CLHC1Q8NHS4 RNU7-197P-201ENST00000458836 62 ntBASIC-1.6□□□□□ -2.67
CLHC1Q8NHS4 FGF7P7-201ENST00000514120 227 ntBASIC-1.6□□□□□ -2.67
CLHC1Q8NHS4 RNU6-65P-201ENST00000516332 98 ntBASIC-1.6□□□□□ -2.67
CLHC1Q8NHS4 MIR4441-201ENST00000582623 100 ntBASIC-1.6□□□□□ -2.67
CLHC1Q8NHS4 MIR4306-201ENST00000583390 91 ntBASIC-1.6□□□□□ -2.67
CLHC1Q8NHS4 MIR4536-1-201ENST00000583537 88 ntBASIC-1.6□□□□□ -2.67
CLHC1Q8NHS4 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.61□□□□□ -2.67
CLHC1Q8NHS4 SNORD50.2-201ENST00000365465 70 ntBASIC-1.61□□□□□ -2.67
CLHC1Q8NHS4 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.61□□□□□ -2.67
CLHC1Q8NHS4 RNU6-719P-201ENST00000516671 104 ntBASIC-1.61□□□□□ -2.67
CLHC1Q8NHS4 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.62□□□□□ -2.67
CLHC1Q8NHS4 SNORA63.2-201ENST00000362603 126 ntBASIC-1.62□□□□□ -2.67
CLHC1Q8NHS4 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.62□□□□□ -2.67
CLHC1Q8NHS4 MIR124-2-201ENST00000385081 109 ntBASIC-1.62□□□□□ -2.67
CLHC1Q8NHS4 RNU7-24P-201ENST00000458867 62 ntBASIC-1.62□□□□□ -2.67
CLHC1Q8NHS4 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.62□□□□□ -2.67
CLHC1Q8NHS4 RNU6-158P-201ENST00000517104 100 ntBASIC-1.62□□□□□ -2.67
CLHC1Q8NHS4 snoU83B.1-201ENST00000517136 88 ntBASIC-1.62□□□□□ -2.67
CLHC1Q8NHS4 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.63□□□□□ -2.67
CLHC1Q8NHS4 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.63□□□□□ -2.67
CLHC1Q8NHS4 SNORD114-17-201ENST00000364699 75 ntBASIC-1.63□□□□□ -2.67
CLHC1Q8NHS4 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.63□□□□□ -2.67
CLHC1Q8NHS4 AC025521.1-201ENST00000621624 286 ntBASIC-1.63□□□□□ -2.67
CLHC1Q8NHS4 MIR1263-201ENST00000408324 86 ntBASIC-1.64□□□□□ -2.67
CLHC1Q8NHS4 RNU6-208P-201ENST00000362431 107 ntBASIC-1.65□□□□□ -2.67
CLHC1Q8NHS4 RNY4P6-201ENST00000363667 96 ntBASIC-1.65□□□□□ -2.67
CLHC1Q8NHS4 RNU6-915P-201ENST00000364943 103 ntBASIC-1.65□□□□□ -2.67
CLHC1Q8NHS4 SNORA24B-201ENST00000384176 131 ntBASIC-1.65□□□□□ -2.67
CLHC1Q8NHS4 RNU7-85P-201ENST00000458851 63 ntBASIC-1.65□□□□□ -2.67
CLHC1Q8NHS4 AL117187.1-201ENST00000555482 181 ntBASIC-1.65□□□□□ -2.67
CLHC1Q8NHS4 MIR4464-201ENST00000580818 92 ntBASIC-1.65□□□□□ -2.67
CLHC1Q8NHS4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.65□□□□□ -2.67
CLHC1Q8NHS4 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.66□□□□□ -2.68
CLHC1Q8NHS4 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.66□□□□□ -2.68
CLHC1Q8NHS4 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.66□□□□□ -2.68
CLHC1Q8NHS4 MIR1207-201ENST00000408249 87 ntBASIC-1.66□□□□□ -2.68
CLHC1Q8NHS4 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.67□□□□□ -2.68
CLHC1Q8NHS4 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.67□□□□□ -2.68
CLHC1Q8NHS4 RNU6-816P-201ENST00000390914 107 ntBASIC-1.67□□□□□ -2.68
CLHC1Q8NHS4 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.67□□□□□ -2.68
CLHC1Q8NHS4 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.67□□□□□ -2.68
CLHC1Q8NHS4 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.67□□□□□ -2.68
CLHC1Q8NHS4 AC021146.9-201ENST00000512503 156 ntBASIC-1.67□□□□□ -2.68
CLHC1Q8NHS4 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.67□□□□□ -2.68
CLHC1Q8NHS4 AC044792.1-201ENST00000593294 196 ntBASIC-1.67□□□□□ -2.68
CLHC1Q8NHS4 U6.96-201ENST00000636425 70 ntBASIC-1.67□□□□□ -2.68
CLHC1Q8NHS4 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.68□□□□□ -2.68
CLHC1Q8NHS4 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.68□□□□□ -2.68
CLHC1Q8NHS4 RNU6-990P-201ENST00000364385 104 ntBASIC-1.68□□□□□ -2.68
CLHC1Q8NHS4 RNU6-132P-201ENST00000383863 107 ntBASIC-1.68□□□□□ -2.68
CLHC1Q8NHS4 SNORD75.2-201ENST00000408784 58 ntBASIC-1.68□□□□□ -2.68
CLHC1Q8NHS4 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.69□□□□□ -2.68
CLHC1Q8NHS4 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.69□□□□□ -2.68
CLHC1Q8NHS4 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.69□□□□□ -2.68
CLHC1Q8NHS4 RNU6-460P-201ENST00000391158 108 ntBASIC-1.69□□□□□ -2.68
CLHC1Q8NHS4 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.69□□□□□ -2.68
CLHC1Q8NHS4 RNU6-706P-201ENST00000517229 104 ntBASIC-1.69□□□□□ -2.68
CLHC1Q8NHS4 AL353803.5-201ENST00000599815 141 ntBASIC-1.69□□□□□ -2.68
CLHC1Q8NHS4 AC072026.1-201ENST00000605023 201 ntBASIC-1.69□□□□□ -2.68
CLHC1Q8NHS4 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.7□□□□□ -2.68
CLHC1Q8NHS4 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.7□□□□□ -2.68
CLHC1Q8NHS4 RNU4-11P-201ENST00000365287 132 ntBASIC-1.7□□□□□ -2.68
CLHC1Q8NHS4 MIR548U-201ENST00000390728 81 ntBASIC-1.7□□□□□ -2.68
CLHC1Q8NHS4 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.7□□□□□ -2.68
CLHC1Q8NHS4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
CLHC1Q8NHS4 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.7□□□□□ -2.68
CLHC1Q8NHS4 RNU6-111P-201ENST00000517179 105 ntBASIC-1.7□□□□□ -2.68
CLHC1Q8NHS4 SNORA81.3-201ENST00000517283 198 ntBASIC-1.7□□□□□ -2.68
CLHC1Q8NHS4 AC022559.1-201ENST00000520905 205 ntBASIC-1.7□□□□□ -2.68
CLHC1Q8NHS4 MIR3140-201ENST00000583685 90 ntBASIC-1.7□□□□□ -2.68
CLHC1Q8NHS4 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.71□□□□□ -2.68
CLHC1Q8NHS4 MIR548A1-201ENST00000385041 97 ntBASIC-1.71□□□□□ -2.68
CLHC1Q8NHS4 AL513043.2-201ENST00000573941 143 ntBASIC-1.71□□□□□ -2.68
CLHC1Q8NHS4 MIR3064-201ENST00000581130 66 ntBASIC-1.71□□□□□ -2.68
CLHC1Q8NHS4 MIR3128-201ENST00000581957 66 ntBASIC-1.71□□□□□ -2.68
CLHC1Q8NHS4 AL445584.3-201ENST00000617173 78 ntBASIC-1.71□□□□□ -2.68
CLHC1Q8NHS4 AP001340.1-201ENST00000624405 217 ntBASIC-1.71□□□□□ -2.68
CLHC1Q8NHS4 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.72□□□□□ -2.68
CLHC1Q8NHS4 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.72□□□□□ -2.68
CLHC1Q8NHS4 MIR577-201ENST00000385196 96 ntBASIC-1.72□□□□□ -2.68
CLHC1Q8NHS4 AC068339.1-201ENST00000526965 141 ntBASIC-1.72□□□□□ -2.68
CLHC1Q8NHS4 MIR4694-201ENST00000578534 80 ntBASIC-1.72□□□□□ -2.68
CLHC1Q8NHS4 MIR6888-201ENST00000621977 67 ntBASIC-1.72□□□□□ -2.68
CLHC1Q8NHS4 AC090617.8-201ENST00000623339 167 ntBASIC-1.72□□□□□ -2.68
CLHC1Q8NHS4 AL158147.1-201ENST00000443970 75 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 317.4 ms