Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
PRPF38BQ5VTL8 RNU1-42P-201ENST00000364033 160 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 SNORD12-201ENST00000391002 90 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 MIR1827-201ENST00000408549 66 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 SNORD75.2-201ENST00000408784 58 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 MIR548AG2-201ENST00000581228 64 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 AC069503.3-201ENST00000618674 145 ntBASIC1.95□□□□□ -2.1
PRPF38BQ5VTL8 MIR633-201ENST00000384821 98 ntBASIC1.94□□□□□ -2.1
PRPF38BQ5VTL8 AL691482.2-201ENST00000457453 84 ntBASIC1.94□□□□□ -2.1
PRPF38BQ5VTL8 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
PRPF38BQ5VTL8 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
PRPF38BQ5VTL8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.93□□□□□ -2.1
PRPF38BQ5VTL8 AC079150.2-201ENST00000443733 78 ntBASIC1.93□□□□□ -2.1
PRPF38BQ5VTL8 uc_338.16-201ENST00000621804 95 ntBASIC1.93□□□□□ -2.1
PRPF38BQ5VTL8 RNU6-495P-201ENST00000362995 107 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 RNU6-1126P-201ENST00000384002 107 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 MIR548J-201ENST00000408833 112 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 AC002429.1-201ENST00000437672 148 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 RNU7-24P-201ENST00000458867 62 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 RNU1-92P-201ENST00000517017 135 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 MIR6078-201ENST00000611069 100 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 AL353770.2-201ENST00000620024 78 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 AP000553.5-201ENST00000641933 54 ntBASIC1.92□□□□□ -2.1
PRPF38BQ5VTL8 RNA5SP403-201ENST00000363598 108 ntBASIC1.91□□□□□ -2.1
PRPF38BQ5VTL8 RNU6-141P-201ENST00000410499 105 ntBASIC1.91□□□□□ -2.1
PRPF38BQ5VTL8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PRPF38BQ5VTL8 RNA5SP117-201ENST00000365294 118 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 RNU6-1039P-201ENST00000383931 107 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 MIR216A-201ENST00000385063 110 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 RNU7-104P-201ENST00000459398 79 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 NAMPTP3-201ENST00000569273 224 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 MIR3920-201ENST00000581751 86 ntBASIC1.9□□□□□ -2.11
PRPF38BQ5VTL8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PRPF38BQ5VTL8 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
PRPF38BQ5VTL8 RNA5SP338-201ENST00000410495 85 ntBASIC1.89□□□□□ -2.11
PRPF38BQ5VTL8 RNU7-161P-201ENST00000517289 62 ntBASIC1.89□□□□□ -2.11
PRPF38BQ5VTL8 AL136317.1-201ENST00000612653 226 ntBASIC1.89□□□□□ -2.11
PRPF38BQ5VTL8 SNORA25-201ENST00000384384 134 ntBASIC1.88□□□□□ -2.11
PRPF38BQ5VTL8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PRPF38BQ5VTL8 SNORD89-201ENST00000390981 114 ntBASIC1.88□□□□□ -2.11
PRPF38BQ5VTL8 MIR6509-201ENST00000614603 85 ntBASIC1.88□□□□□ -2.11
PRPF38BQ5VTL8 MIR203A-201ENST00000384836 110 ntBASIC1.87□□□□□ -2.11
PRPF38BQ5VTL8 RNA5SP436-201ENST00000516020 115 ntBASIC1.87□□□□□ -2.11
PRPF38BQ5VTL8 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
PRPF38BQ5VTL8 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
PRPF38BQ5VTL8 RNU6-614P-201ENST00000384369 107 ntBASIC1.86□□□□□ -2.11
PRPF38BQ5VTL8 SNORA67.6-201ENST00000391093 99 ntBASIC1.86□□□□□ -2.11
PRPF38BQ5VTL8 U6.59-201ENST00000615686 107 ntBASIC1.86□□□□□ -2.11
PRPF38BQ5VTL8 MIR548O2-201ENST00000616090 70 ntBASIC1.86□□□□□ -2.11
PRPF38BQ5VTL8 RNA5SP327-201ENST00000362494 101 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 RNU6-668P-201ENST00000364180 107 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 MIR617-201ENST00000385030 97 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 AL354695.1-201ENST00000427935 228 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 MTND4LP1-201ENST00000446263 157 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 RNU6-469P-201ENST00000516253 101 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 AC073869.9-201ENST00000641610 120 ntBASIC1.85□□□□□ -2.11
PRPF38BQ5VTL8 RNU6-54P-201ENST00000365563 107 ntBASIC1.84□□□□□ -2.11
PRPF38BQ5VTL8 Y_RNA.375-201ENST00000365625 101 ntBASIC1.84□□□□□ -2.11
PRPF38BQ5VTL8 MIR216B-201ENST00000390186 82 ntBASIC1.84□□□□□ -2.11
PRPF38BQ5VTL8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.84□□□□□ -2.11
PRPF38BQ5VTL8 AC092634.7-201ENST00000621022 103 ntBASIC1.84□□□□□ -2.11
PRPF38BQ5VTL8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
PRPF38BQ5VTL8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 MIR519E-201ENST00000385075 84 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 MIR644A-201ENST00000385262 94 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 AC002350.1-201ENST00000490759 375 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-542P-201ENST00000516405 103 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 AC067863.3-201ENST00000624172 122 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
PRPF38BQ5VTL8 Y_RNA.115-201ENST00000363272 98 ntBASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-829P-201ENST00000363700 112 ntBASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 FABP5P4-201ENST00000437203 171 ntBASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 MIR3657-201ENST00000584818 117 ntBASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 AL627230.5-201ENST00000619807 58 ntBASIC1.82□□□□□ -2.12
PRPF38BQ5VTL8 RNA5SP62-201ENST00000363457 110 ntBASIC1.81□□□□□ -2.12
PRPF38BQ5VTL8 SNORD42B-201ENST00000458893 67 ntBASIC1.81□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.81□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-645P-201ENST00000364649 106 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 RNA5SP363-201ENST00000365072 115 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 MIR193B-201ENST00000384907 83 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 SNORD105-201ENST00000386910 85 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 MIR548L-201ENST00000408303 86 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-135P-201ENST00000516769 101 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 MIR1273G-201ENST00000577677 100 ntBASIC1.8□□□□□ -2.12
PRPF38BQ5VTL8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PRPF38BQ5VTL8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
PRPF38BQ5VTL8 AC098934.3-201ENST00000430450 190 ntBASIC1.78□□□□□ -2.12
PRPF38BQ5VTL8 SNORA40.17-201ENST00000517256 115 ntBASIC1.78□□□□□ -2.12
PRPF38BQ5VTL8 RNU6-1079P-201ENST00000362861 110 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 SNORA25.5-201ENST00000363782 126 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 RNA5SP192-201ENST00000364404 120 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 Y_RNA.236-201ENST00000364427 111 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 RNU6-260P-201ENST00000384092 107 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 RNU6V-201ENST00000384105 107 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 U7.7-201ENST00000459276 60 ntBASIC1.77□□□□□ -2.13
PRPF38BQ5VTL8 SNORA31.24-201ENST00000517232 57 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms