Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MIR4536-1-201ENST00000583537 88 ntBASIC-1.52□□□□□ -2.65
CLDN18P56856 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.52□□□□□ -2.65
CLDN18P56856 AL442128.1-201ENST00000615151 90 ntBASIC-1.52□□□□□ -2.65
CLDN18P56856 MIR6888-201ENST00000621977 67 ntBASIC-1.52□□□□□ -2.65
CLDN18P56856 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.52□□□□□ -2.65
CLDN18P56856 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.52□□□□□ -2.65
CLDN18P56856 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.53□□□□□ -2.65
CLDN18P56856 SNORA63.2-201ENST00000362603 126 ntBASIC-1.53□□□□□ -2.65
CLDN18P56856 RNU6-990P-201ENST00000364385 104 ntBASIC-1.53□□□□□ -2.65
CLDN18P56856 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.53□□□□□ -2.65
CLDN18P56856 RNU6-918P-201ENST00000391219 106 ntBASIC-1.53□□□□□ -2.65
CLDN18P56856 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.54□□□□□ -2.66
CLDN18P56856 RNU6-409P-201ENST00000384114 104 ntBASIC-1.54□□□□□ -2.66
CLDN18P56856 MIR548D2-201ENST00000384955 97 ntBASIC-1.54□□□□□ -2.66
CLDN18P56856 RNU7-24P-201ENST00000458867 62 ntBASIC-1.54□□□□□ -2.66
CLDN18P56856 AC068339.1-201ENST00000526965 141 ntBASIC-1.54□□□□□ -2.66
CLDN18P56856 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.55□□□□□ -2.66
CLDN18P56856 RNU6-239P-201ENST00000390990 99 ntBASIC-1.55□□□□□ -2.66
CLDN18P56856 AC090617.8-201ENST00000623339 167 ntBASIC-1.55□□□□□ -2.66
CLDN18P56856 MIR365A-201ENST00000362260 87 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 RNU6-924P-201ENST00000362926 108 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 SNORD115-33-201ENST00000363723 82 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 AC026421.1-201ENST00000519101 163 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 MIR3658-201ENST00000636291 56 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.56□□□□□ -2.66
CLDN18P56856 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 SNORD50.2-201ENST00000365465 70 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 RNU6-576P-201ENST00000390854 102 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 SNORA26.4-201ENST00000391188 123 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 MIR1285-2-201ENST00000408311 88 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 SNORD75.2-201ENST00000408784 58 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 U4.2-201ENST00000618561 85 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 MIR6818-201ENST00000621576 65 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 AC025521.1-201ENST00000621624 286 ntBASIC-1.57□□□□□ -2.66
CLDN18P56856 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.58□□□□□ -2.66
CLDN18P56856 SNORA24B-201ENST00000384176 131 ntBASIC-1.58□□□□□ -2.66
CLDN18P56856 MIR548A1-201ENST00000385041 97 ntBASIC-1.58□□□□□ -2.66
CLDN18P56856 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.58□□□□□ -2.66
CLDN18P56856 RNA5SP136-201ENST00000410906 107 ntBASIC-1.58□□□□□ -2.66
CLDN18P56856 MIR3121-201ENST00000579680 77 ntBASIC-1.58□□□□□ -2.66
CLDN18P56856 MIR3140-201ENST00000583685 90 ntBASIC-1.58□□□□□ -2.66
CLDN18P56856 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.59□□□□□ -2.66
CLDN18P56856 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.59□□□□□ -2.66
CLDN18P56856 RNU6-746P-201ENST00000384112 109 ntBASIC-1.59□□□□□ -2.66
CLDN18P56856 SNORD63.1-201ENST00000516178 80 ntBASIC-1.59□□□□□ -2.66
CLDN18P56856 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.59□□□□□ -2.66
CLDN18P56856 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.6□□□□□ -2.67
CLDN18P56856 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.6□□□□□ -2.67
CLDN18P56856 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.6□□□□□ -2.67
CLDN18P56856 MIR548U-201ENST00000390728 81 ntBASIC-1.6□□□□□ -2.67
CLDN18P56856 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
CLDN18P56856 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.6□□□□□ -2.67
CLDN18P56856 MIR1263-201ENST00000408324 86 ntBASIC-1.6□□□□□ -2.67
CLDN18P56856 RNU4-61P-201ENST00000411243 107 ntBASIC-1.6□□□□□ -2.67
CLDN18P56856 RNU7-85P-201ENST00000458851 63 ntBASIC-1.6□□□□□ -2.67
CLDN18P56856 RNU4-71P-201ENST00000516258 113 ntBASIC-1.6□□□□□ -2.67
CLDN18P56856 RNU7-121P-201ENST00000516604 62 ntBASIC-1.6□□□□□ -2.67
CLDN18P56856 AC044792.1-201ENST00000593294 196 ntBASIC-1.6□□□□□ -2.67
CLDN18P56856 RNU6-132P-201ENST00000383863 107 ntBASIC-1.61□□□□□ -2.67
CLDN18P56856 MIR527-201ENST00000385244 85 ntBASIC-1.61□□□□□ -2.67
CLDN18P56856 SNORD58.1-201ENST00000391313 66 ntBASIC-1.61□□□□□ -2.67
CLDN18P56856 RNU7-134P-201ENST00000458997 64 ntBASIC-1.61□□□□□ -2.67
CLDN18P56856 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.61□□□□□ -2.67
CLDN18P56856 RNA5SP180-201ENST00000516181 101 ntBASIC-1.61□□□□□ -2.67
CLDN18P56856 AC130289.1-201ENST00000577321 73 ntBASIC-1.61□□□□□ -2.67
CLDN18P56856 SNORD114-3-201ENST00000364969 75 ntBASIC-1.62□□□□□ -2.67
CLDN18P56856 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.62□□□□□ -2.67
CLDN18P56856 HLA-S-202ENST00000425174 53 ntBASIC-1.62□□□□□ -2.67
CLDN18P56856 MIR4441-201ENST00000582623 100 ntBASIC-1.62□□□□□ -2.67
CLDN18P56856 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.63□□□□□ -2.67
CLDN18P56856 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.63□□□□□ -2.67
CLDN18P56856 MIR1255B2-201ENST00000408618 67 ntBASIC-1.63□□□□□ -2.67
CLDN18P56856 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.63□□□□□ -2.67
CLDN18P56856 MIR3064-201ENST00000581130 66 ntBASIC-1.63□□□□□ -2.67
CLDN18P56856 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.63□□□□□ -2.67
CLDN18P56856 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.64□□□□□ -2.67
CLDN18P56856 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.64□□□□□ -2.67
CLDN18P56856 RNU6-158P-201ENST00000517104 100 ntBASIC-1.64□□□□□ -2.67
CLDN18P56856 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.65□□□□□ -2.67
CLDN18P56856 RNU6-260P-201ENST00000384092 107 ntBASIC-1.65□□□□□ -2.67
CLDN18P56856 RNU6-816P-201ENST00000390914 107 ntBASIC-1.65□□□□□ -2.67
CLDN18P56856 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.65□□□□□ -2.67
CLDN18P56856 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.65□□□□□ -2.67
CLDN18P56856 snoU13.17-201ENST00000458802 104 ntBASIC-1.65□□□□□ -2.67
CLDN18P56856 AL513043.2-201ENST00000573941 143 ntBASIC-1.65□□□□□ -2.67
CLDN18P56856 AC104996.3-201ENST00000590718 94 ntBASIC-1.65□□□□□ -2.67
CLDN18P56856 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.66□□□□□ -2.68
CLDN18P56856 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.66□□□□□ -2.68
CLDN18P56856 SNORA33.1-201ENST00000364957 130 ntBASIC-1.66□□□□□ -2.68
CLDN18P56856 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms