Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.14□□□□□ -2.75
HLA-EP13747 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.14□□□□□ -2.75
HLA-EP13747 SNORD115-22-201ENST00000364456 82 ntBASIC-2.14□□□□□ -2.75
HLA-EP13747 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.14□□□□□ -2.75
HLA-EP13747 SNORA75.5-201ENST00000391291 81 ntBASIC-2.14□□□□□ -2.75
HLA-EP13747 AC108019.1-201ENST00000512540 175 ntBASIC-2.14□□□□□ -2.75
HLA-EP13747 RNY3P16-201ENST00000516338 101 ntBASIC-2.14□□□□□ -2.75
HLA-EP13747 MIR4536-1-201ENST00000583537 88 ntBASIC-2.14□□□□□ -2.75
HLA-EP13747 MIR3149-201ENST00000584629 83 ntBASIC-2.14□□□□□ -2.75
HLA-EP13747 MIR548A1-201ENST00000385041 97 ntBASIC-2.15□□□□□ -2.75
HLA-EP13747 MIR507-201ENST00000385234 94 ntBASIC-2.15□□□□□ -2.75
HLA-EP13747 AL353691.2-201ENST00000443795 59 ntBASIC-2.15□□□□□ -2.75
HLA-EP13747 RNU7-24P-201ENST00000458867 62 ntBASIC-2.15□□□□□ -2.75
HLA-EP13747 MIR3140-201ENST00000583685 90 ntBASIC-2.15□□□□□ -2.75
HLA-EP13747 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.16□□□□□ -2.76
HLA-EP13747 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.16□□□□□ -2.76
HLA-EP13747 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.16□□□□□ -2.76
HLA-EP13747 RNU6-400P-201ENST00000391173 106 ntBASIC-2.16□□□□□ -2.76
HLA-EP13747 RNU6-493P-201ENST00000391321 108 ntBASIC-2.16□□□□□ -2.76
HLA-EP13747 RNU6-1018P-201ENST00000516577 106 ntBASIC-2.16□□□□□ -2.76
HLA-EP13747 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.16□□□□□ -2.76
HLA-EP13747 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.16□□□□□ -2.76
HLA-EP13747 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.17□□□□□ -2.76
HLA-EP13747 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.17□□□□□ -2.76
HLA-EP13747 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.17□□□□□ -2.76
HLA-EP13747 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.17□□□□□ -2.76
HLA-EP13747 RNU6-363P-201ENST00000362895 105 ntBASIC-2.18□□□□□ -2.76
HLA-EP13747 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.18□□□□□ -2.76
HLA-EP13747 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.18□□□□□ -2.76
HLA-EP13747 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.18□□□□□ -2.76
HLA-EP13747 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.18□□□□□ -2.76
HLA-EP13747 Z83846.1-201ENST00000446798 265 ntBASIC-2.18□□□□□ -2.76
HLA-EP13747 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.18□□□□□ -2.76
HLA-EP13747 RNU6-168P-201ENST00000516189 101 ntBASIC-2.18□□□□□ -2.76
HLA-EP13747 MIR664B-201ENST00000626756 61 ntBASIC-2.18□□□□□ -2.76
HLA-EP13747 SNORA33.1-201ENST00000364957 130 ntBASIC-2.19□□□□□ -2.76
HLA-EP13747 SNORA24B-201ENST00000384176 131 ntBASIC-2.19□□□□□ -2.76
HLA-EP13747 MIR759-201ENST00000390224 91 ntBASIC-2.19□□□□□ -2.76
HLA-EP13747 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.19□□□□□ -2.76
HLA-EP13747 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.19□□□□□ -2.76
HLA-EP13747 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.19□□□□□ -2.76
HLA-EP13747 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.2□□□□□ -2.76
HLA-EP13747 AL442128.1-201ENST00000615151 90 ntBASIC-2.2□□□□□ -2.76
HLA-EP13747 AC025521.1-201ENST00000621624 286 ntBASIC-2.2□□□□□ -2.76
HLA-EP13747 RNU6-623P-201ENST00000363143 105 ntBASIC-2.21□□□□□ -2.76
HLA-EP13747 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.21□□□□□ -2.76
HLA-EP13747 RNU6-132P-201ENST00000383863 107 ntBASIC-2.21□□□□□ -2.76
HLA-EP13747 snoU13.17-201ENST00000458802 104 ntBASIC-2.21□□□□□ -2.76
HLA-EP13747 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.21□□□□□ -2.76
HLA-EP13747 MIR6844-201ENST00000637122 62 ntBASIC-2.21□□□□□ -2.76
HLA-EP13747 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.22□□□□□ -2.76
HLA-EP13747 SNORD50.2-201ENST00000365465 70 ntBASIC-2.22□□□□□ -2.76
HLA-EP13747 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.22□□□□□ -2.76
HLA-EP13747 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.22□□□□□ -2.76
HLA-EP13747 RNU7-85P-201ENST00000458851 63 ntBASIC-2.22□□□□□ -2.76
HLA-EP13747 MTND1P19-201ENST00000511780 315 ntBASIC-2.22□□□□□ -2.76
HLA-EP13747 RNA5SP147-201ENST00000516493 109 ntBASIC-2.22□□□□□ -2.76
HLA-EP13747 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.22□□□□□ -2.76
HLA-EP13747 CYP3A54P-201ENST00000566950 75 ntBASIC-2.22□□□□□ -2.76
HLA-EP13747 U6.106-201ENST00000636360 105 ntBASIC-2.22□□□□□ -2.76
HLA-EP13747 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.23□□□□□ -2.77
HLA-EP13747 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.23□□□□□ -2.77
HLA-EP13747 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.23□□□□□ -2.77
HLA-EP13747 RNU6-409P-201ENST00000384114 104 ntBASIC-2.23□□□□□ -2.77
HLA-EP13747 RNU6-80P-201ENST00000384195 107 ntBASIC-2.23□□□□□ -2.77
HLA-EP13747 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.23□□□□□ -2.77
HLA-EP13747 AL589823.1-201ENST00000429577 183 ntBASIC-2.23□□□□□ -2.77
HLA-EP13747 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.23□□□□□ -2.77
HLA-EP13747 MIR4756-201ENST00000577874 78 ntBASIC-2.23□□□□□ -2.77
HLA-EP13747 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.24□□□□□ -2.77
HLA-EP13747 RNY1P11-201ENST00000363759 113 ntBASIC-2.24□□□□□ -2.77
HLA-EP13747 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.24□□□□□ -2.77
HLA-EP13747 RNU6-260P-201ENST00000384092 107 ntBASIC-2.24□□□□□ -2.77
HLA-EP13747 MIR548U-201ENST00000390728 81 ntBASIC-2.24□□□□□ -2.77
HLA-EP13747 SNORD54-201ENST00000459159 67 ntBASIC-2.24□□□□□ -2.77
HLA-EP13747 MIR4643-201ENST00000577473 78 ntBASIC-2.24□□□□□ -2.77
HLA-EP13747 MIR548D2-201ENST00000384955 97 ntBASIC-2.25□□□□□ -2.77
HLA-EP13747 AC090616.4-201ENST00000448026 115 ntBASIC-2.25□□□□□ -2.77
HLA-EP13747 RNU7-154P-201ENST00000516194 62 ntBASIC-2.25□□□□□ -2.77
HLA-EP13747 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.25□□□□□ -2.77
HLA-EP13747 MIR4490-201ENST00000582647 84 ntBASIC-2.25□□□□□ -2.77
HLA-EP13747 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.26□□□□□ -2.77
HLA-EP13747 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.26□□□□□ -2.77
HLA-EP13747 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.26□□□□□ -2.77
HLA-EP13747 MT-TW-201ENST00000387382 68 ntBASIC-2.26□□□□□ -2.77
HLA-EP13747 AC026407.1-201ENST00000518369 204 ntBASIC-2.26□□□□□ -2.77
HLA-EP13747 MIR3646-201ENST00000578301 84 ntBASIC-2.26□□□□□ -2.77
HLA-EP13747 AC113195.1-201ENST00000579952 141 ntBASIC-2.26□□□□□ -2.77
HLA-EP13747 MIR3064-201ENST00000581130 66 ntBASIC-2.26□□□□□ -2.77
HLA-EP13747 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.26□□□□□ -2.77
HLA-EP13747 RNU6-312P-201ENST00000364629 107 ntBASIC-2.27□□□□□ -2.77
HLA-EP13747 RNY4P28-201ENST00000365281 93 ntBASIC-2.27□□□□□ -2.77
HLA-EP13747 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.27□□□□□ -2.77
HLA-EP13747 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.27□□□□□ -2.77
HLA-EP13747 RNY4-201ENST00000516507 96 ntBASIC-2.27□□□□□ -2.77
HLA-EP13747 RNU6-79P-201ENST00000362511 107 ntBASIC-2.28□□□□□ -2.77
HLA-EP13747 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.28□□□□□ -2.77
HLA-EP13747 RNY3P1-201ENST00000365085 102 ntBASIC-2.28□□□□□ -2.77
HLA-EP13747 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.28□□□□□ -2.77
HLA-EP13747 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms