Protein–RNA interactions for Protein: P0CW20

LIMS4, LIM and senescent cell antigen-like-containing domain protein 4, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4P0CW20 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.95□□□□□ -2.72
LIMS4P0CW20 MIR29B1-201ENST00000385015 81 ntBASIC-1.95□□□□□ -2.72
LIMS4P0CW20 RNU6-239P-201ENST00000390990 99 ntBASIC-1.95□□□□□ -2.72
LIMS4P0CW20 MIR4770-201ENST00000579149 58 ntBASIC-1.95□□□□□ -2.72
LIMS4P0CW20 MIR4464-201ENST00000580818 92 ntBASIC-1.95□□□□□ -2.72
LIMS4P0CW20 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.95□□□□□ -2.72
LIMS4P0CW20 MIR1246-201ENST00000636535 73 ntBASIC-1.95□□□□□ -2.72
LIMS4P0CW20 MIR365A-201ENST00000362260 87 ntBASIC-1.96□□□□□ -2.72
LIMS4P0CW20 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.96□□□□□ -2.72
LIMS4P0CW20 MIR527-201ENST00000385244 85 ntBASIC-1.96□□□□□ -2.72
LIMS4P0CW20 MTND2P23-201ENST00000422990 651 ntBASIC-1.96□□□□□ -2.72
LIMS4P0CW20 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.96□□□□□ -2.72
LIMS4P0CW20 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.96□□□□□ -2.72
LIMS4P0CW20 AL445584.3-201ENST00000617173 78 ntBASIC-1.96□□□□□ -2.72
LIMS4P0CW20 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.97□□□□□ -2.72
LIMS4P0CW20 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.97□□□□□ -2.72
LIMS4P0CW20 RNU6-238P-201ENST00000363313 106 ntBASIC-1.97□□□□□ -2.72
LIMS4P0CW20 RNU6-990P-201ENST00000364385 104 ntBASIC-1.97□□□□□ -2.72
LIMS4P0CW20 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.97□□□□□ -2.72
LIMS4P0CW20 MIR3121-201ENST00000579680 77 ntBASIC-1.97□□□□□ -2.72
LIMS4P0CW20 MIR3658-201ENST00000636291 56 ntBASIC-1.97□□□□□ -2.72
LIMS4P0CW20 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.98□□□□□ -2.73
LIMS4P0CW20 SNORD50.2-201ENST00000365465 70 ntBASIC-1.98□□□□□ -2.73
LIMS4P0CW20 RNU7-24P-201ENST00000458867 62 ntBASIC-1.98□□□□□ -2.73
LIMS4P0CW20 RNU7-121P-201ENST00000516604 62 ntBASIC-1.98□□□□□ -2.73
LIMS4P0CW20 AC130289.1-201ENST00000577321 73 ntBASIC-1.98□□□□□ -2.73
LIMS4P0CW20 MIR548S-201ENST00000581352 82 ntBASIC-1.98□□□□□ -2.73
LIMS4P0CW20 MIR4441-201ENST00000582623 100 ntBASIC-1.98□□□□□ -2.73
LIMS4P0CW20 AC025521.1-201ENST00000621624 286 ntBASIC-1.98□□□□□ -2.73
LIMS4P0CW20 RNU6-226P-201ENST00000363778 107 ntBASIC-1.99□□□□□ -2.73
LIMS4P0CW20 SNORD58.1-201ENST00000391313 66 ntBASIC-1.99□□□□□ -2.73
LIMS4P0CW20 MIR889-201ENST00000401280 79 ntBASIC-1.99□□□□□ -2.73
LIMS4P0CW20 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.99□□□□□ -2.73
LIMS4P0CW20 RNU6-158P-201ENST00000517104 100 ntBASIC-1.99□□□□□ -2.73
LIMS4P0CW20 MIR6818-201ENST00000621576 65 ntBASIC-1.99□□□□□ -2.73
LIMS4P0CW20 MIR6888-201ENST00000621977 67 ntBASIC-1.99□□□□□ -2.73
LIMS4P0CW20 RNU6-924P-201ENST00000362926 108 ntBASIC-2□□□□□ -2.73
LIMS4P0CW20 RNU6-639P-201ENST00000384074 107 ntBASIC-2□□□□□ -2.73
LIMS4P0CW20 Y_RNA.509-201ENST00000384506 99 ntBASIC-2□□□□□ -2.73
LIMS4P0CW20 MIR548U-201ENST00000390728 81 ntBASIC-2□□□□□ -2.73
LIMS4P0CW20 RNU6-1177P-201ENST00000391058 104 ntBASIC-2□□□□□ -2.73
LIMS4P0CW20 SNORD75.2-201ENST00000408784 58 ntBASIC-2□□□□□ -2.73
LIMS4P0CW20 RNU2-38P-201ENST00000410856 79 ntBASIC-2□□□□□ -2.73
LIMS4P0CW20 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.01□□□□□ -2.73
LIMS4P0CW20 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.01□□□□□ -2.73
LIMS4P0CW20 AC020661.2-201ENST00000560114 134 ntBASIC-2.01□□□□□ -2.73
LIMS4P0CW20 MIR6129-201ENST00000616087 109 ntBASIC-2.01□□□□□ -2.73
LIMS4P0CW20 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.02□□□□□ -2.73
LIMS4P0CW20 SNORA33.2-201ENST00000365413 134 ntBASIC-2.02□□□□□ -2.73
LIMS4P0CW20 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.02□□□□□ -2.73
LIMS4P0CW20 MIR548A1-201ENST00000385041 97 ntBASIC-2.02□□□□□ -2.73
LIMS4P0CW20 MIR1263-201ENST00000408324 86 ntBASIC-2.02□□□□□ -2.73
LIMS4P0CW20 MIR1468-201ENST00000410600 86 ntBASIC-2.02□□□□□ -2.73
LIMS4P0CW20 MIR3140-201ENST00000583685 90 ntBASIC-2.02□□□□□ -2.73
LIMS4P0CW20 AC090617.8-201ENST00000623339 167 ntBASIC-2.02□□□□□ -2.73
LIMS4P0CW20 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.03□□□□□ -2.73
LIMS4P0CW20 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.03□□□□□ -2.73
LIMS4P0CW20 RNU6-576P-201ENST00000390854 102 ntBASIC-2.03□□□□□ -2.73
LIMS4P0CW20 RNU7-85P-201ENST00000458851 63 ntBASIC-2.03□□□□□ -2.73
LIMS4P0CW20 SNORD115-33-201ENST00000363723 82 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 SNORA24B-201ENST00000384176 131 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 Y_RNA.574-201ENST00000384766 95 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 RNU6-816P-201ENST00000390914 107 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 AC068339.1-201ENST00000526965 141 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 MIR4520-1-201ENST00000582609 70 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 MIR6502-201ENST00000617296 76 ntBASIC-2.04□□□□□ -2.74
LIMS4P0CW20 RNY4P6-201ENST00000363667 96 ntBASIC-2.05□□□□□ -2.74
LIMS4P0CW20 RNU6-132P-201ENST00000383863 107 ntBASIC-2.05□□□□□ -2.74
LIMS4P0CW20 SNORA26.4-201ENST00000391188 123 ntBASIC-2.05□□□□□ -2.74
LIMS4P0CW20 RNU6-1020P-201ENST00000363684 107 ntBASIC-2.06□□□□□ -2.74
LIMS4P0CW20 RNU4-71P-201ENST00000516258 113 ntBASIC-2.06□□□□□ -2.74
LIMS4P0CW20 Y_RNA.20-201ENST00000362479 113 ntBASIC-2.07□□□□□ -2.74
LIMS4P0CW20 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.07□□□□□ -2.74
LIMS4P0CW20 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.07□□□□□ -2.74
LIMS4P0CW20 RNU4-61P-201ENST00000411243 107 ntBASIC-2.07□□□□□ -2.74
LIMS4P0CW20 MTATP8P1-201ENST00000467115 207 ntBASIC-2.07□□□□□ -2.74
LIMS4P0CW20 MIR3064-201ENST00000581130 66 ntBASIC-2.07□□□□□ -2.74
LIMS4P0CW20 AL627230.5-201ENST00000619807 58 ntBASIC-2.07□□□□□ -2.74
LIMS4P0CW20 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.08□□□□□ -2.74
LIMS4P0CW20 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.08□□□□□ -2.74
LIMS4P0CW20 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.08□□□□□ -2.74
LIMS4P0CW20 AL513043.2-201ENST00000573941 143 ntBASIC-2.08□□□□□ -2.74
LIMS4P0CW20 AC006254.2-201ENST00000603259 279 ntBASIC-2.08□□□□□ -2.74
LIMS4P0CW20 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.08□□□□□ -2.74
LIMS4P0CW20 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.08□□□□□ -2.74
LIMS4P0CW20 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.09□□□□□ -2.74
LIMS4P0CW20 RNU6-915P-201ENST00000364943 103 ntBASIC-2.09□□□□□ -2.74
LIMS4P0CW20 RNU6-746P-201ENST00000384112 109 ntBASIC-2.09□□□□□ -2.74
LIMS4P0CW20 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-2.09□□□□□ -2.74
LIMS4P0CW20 RNU2-51P-201ENST00000410708 197 ntBASIC-2.09□□□□□ -2.74
LIMS4P0CW20 SNORD63.1-201ENST00000516178 80 ntBASIC-2.09□□□□□ -2.74
LIMS4P0CW20 AC104996.3-201ENST00000590718 94 ntBASIC-2.09□□□□□ -2.74
LIMS4P0CW20 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.1□□□□□ -2.75
LIMS4P0CW20 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.1□□□□□ -2.75
LIMS4P0CW20 MIR1255B2-201ENST00000408618 67 ntBASIC-2.1□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms