Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 MIR4536-1-201ENST00000583537 88 ntBASIC-2.46□□□□□ -2.8
HMGB3O15347 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.46□□□□□ -2.8
HMGB3O15347 RNU6-363P-201ENST00000362895 105 ntBASIC-2.47□□□□□ -2.8
HMGB3O15347 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.47□□□□□ -2.8
HMGB3O15347 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.47□□□□□ -2.8
HMGB3O15347 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 SNORA24B-201ENST00000384176 131 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 AC108019.1-201ENST00000512540 175 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.48□□□□□ -2.81
HMGB3O15347 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.48□□□□□ -2.81
HMGB3O15347 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.49□□□□□ -2.81
HMGB3O15347 MIR487B-201ENST00000385021 84 ntBASIC-2.49□□□□□ -2.81
HMGB3O15347 Y_RNA.690-201ENST00000516603 95 ntBASIC-2.49□□□□□ -2.81
HMGB3O15347 MIR3140-201ENST00000583685 90 ntBASIC-2.49□□□□□ -2.81
HMGB3O15347 Y_RNA.804-201ENST00000615262 101 ntBASIC-2.49□□□□□ -2.81
HMGB3O15347 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.5□□□□□ -2.81
HMGB3O15347 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.5□□□□□ -2.81
HMGB3O15347 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.5□□□□□ -2.81
HMGB3O15347 RNY3P16-201ENST00000516338 101 ntBASIC-2.5□□□□□ -2.81
HMGB3O15347 RNY1P11-201ENST00000363759 113 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 SNORD115-27-201ENST00000364430 82 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 SNORD50.2-201ENST00000365465 70 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 CYP3A54P-201ENST00000566950 75 ntBASIC-2.51□□□□□ -2.81
HMGB3O15347 SNORA33.1-201ENST00000364957 130 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 RNU6-260P-201ENST00000384092 107 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 RNU6-80P-201ENST00000384195 107 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 RNU6-118P-201ENST00000516552 102 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 AL442128.1-201ENST00000615151 90 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 MIR664B-201ENST00000626756 61 ntBASIC-2.52□□□□□ -2.81
HMGB3O15347 RNU6-623P-201ENST00000363143 105 ntBASIC-2.53□□□□□ -2.81
HMGB3O15347 MIR759-201ENST00000390224 91 ntBASIC-2.53□□□□□ -2.81
HMGB3O15347 snoU13.17-201ENST00000458802 104 ntBASIC-2.53□□□□□ -2.81
HMGB3O15347 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.54□□□□□ -2.82
HMGB3O15347 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.54□□□□□ -2.82
HMGB3O15347 RNU6-132P-201ENST00000383863 107 ntBASIC-2.54□□□□□ -2.82
HMGB3O15347 RNU6-493P-201ENST00000391321 108 ntBASIC-2.54□□□□□ -2.82
HMGB3O15347 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.54□□□□□ -2.82
HMGB3O15347 AC025521.1-201ENST00000621624 286 ntBASIC-2.54□□□□□ -2.82
HMGB3O15347 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 MIR496-201ENST00000385226 102 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 Z83846.1-201ENST00000446798 265 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 RNU7-85P-201ENST00000458851 63 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 MTND1P19-201ENST00000511780 315 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 MIR4756-201ENST00000577874 78 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 MIR6844-201ENST00000637122 62 ntBASIC-2.55□□□□□ -2.82
HMGB3O15347 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 RNU6-409P-201ENST00000384114 104 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 RNU6-168P-201ENST00000516189 101 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 RNU7-154P-201ENST00000516194 62 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 MIR4643-201ENST00000577473 78 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 MIR3646-201ENST00000578301 84 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 MIR4490-201ENST00000582647 84 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 U6.106-201ENST00000636360 105 ntBASIC-2.56□□□□□ -2.82
HMGB3O15347 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.57□□□□□ -2.82
HMGB3O15347 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.57□□□□□ -2.82
HMGB3O15347 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.57□□□□□ -2.82
HMGB3O15347 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.57□□□□□ -2.82
HMGB3O15347 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.58□□□□□ -2.82
HMGB3O15347 MIR548U-201ENST00000390728 81 ntBASIC-2.58□□□□□ -2.82
HMGB3O15347 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.59□□□□□ -2.82
HMGB3O15347 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.59□□□□□ -2.82
HMGB3O15347 MIR548D2-201ENST00000384955 97 ntBASIC-2.59□□□□□ -2.82
HMGB3O15347 RNU6-980P-201ENST00000516925 103 ntBASIC-2.59□□□□□ -2.82
HMGB3O15347 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 RNU6-400P-201ENST00000391173 106 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 AC090616.4-201ENST00000448026 115 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 AP002795.1-201ENST00000534879 84 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 MIR3064-201ENST00000581130 66 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 AC006254.2-201ENST00000603259 279 ntBASIC-2.6□□□□□ -2.83
HMGB3O15347 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.61□□□□□ -2.83
HMGB3O15347 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.61□□□□□ -2.83
HMGB3O15347 AC113195.1-201ENST00000579952 141 ntBASIC-2.61□□□□□ -2.83
HMGB3O15347 MIR5683-201ENST00000636514 76 ntBASIC-2.61□□□□□ -2.83
HMGB3O15347 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.62□□□□□ -2.83
HMGB3O15347 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.62□□□□□ -2.83
HMGB3O15347 MT-TW-201ENST00000387382 68 ntBASIC-2.62□□□□□ -2.83
HMGB3O15347 RNA5SP147-201ENST00000516493 109 ntBASIC-2.62□□□□□ -2.83
HMGB3O15347 RNU6-382P-201ENST00000365181 106 ntBASIC-2.63□□□□□ -2.83
HMGB3O15347 RNY4P28-201ENST00000365281 93 ntBASIC-2.63□□□□□ -2.83
HMGB3O15347 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.63□□□□□ -2.83
HMGB3O15347 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.63□□□□□ -2.83
HMGB3O15347 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.63□□□□□ -2.83
HMGB3O15347 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.64□□□□□ -2.83
HMGB3O15347 MIR519A2-201ENST00000384990 87 ntBASIC-2.64□□□□□ -2.83
HMGB3O15347 RPL35AP4-201ENST00000412007 102 ntBASIC-2.64□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms