Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.06□□□□□ -2.58
RPRD1AQ96P16 AC141273.2-201ENST00000618989 130 ntBASIC-1.06□□□□□ -2.58
RPRD1AQ96P16 RNU6-235P-201ENST00000362644 107 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNU4-11P-201ENST00000365287 132 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNY1P7-201ENST00000384743 110 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 MIR759-201ENST00000390224 91 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNU6-460P-201ENST00000391158 108 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNU7-197P-201ENST00000458836 62 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNU7-55P-201ENST00000459426 62 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 SNORA63-201ENST00000363450 132 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 RNU6-915P-201ENST00000364943 103 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 MIR548D2-201ENST00000384955 97 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 RN7SKP19-201ENST00000516016 252 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 AC072026.1-201ENST00000605023 201 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 MIR6851-201ENST00000617060 67 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 RNU6-363P-201ENST00000362895 105 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 snoU13.11-201ENST00000459219 104 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 SNORD38.3-201ENST00000516599 73 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 AP002392.1-201ENST00000537692 208 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 RNU6-86P-201ENST00000606534 107 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.1□□□□□ -2.59
RPRD1AQ96P16 RNU6-935P-201ENST00000410371 100 ntBASIC-1.1□□□□□ -2.59
RPRD1AQ96P16 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.1□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 MIR582-201ENST00000365731 98 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 MIR1263-201ENST00000408324 86 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 RNA5SP136-201ENST00000410906 107 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 AC021146.6-201ENST00000514659 117 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 SNORA40.17-201ENST00000517256 115 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 RNU6-54P-201ENST00000365563 107 ntBASIC-1.12□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.12□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.12□□□□□ -2.59
RPRD1AQ96P16 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.12□□□□□ -2.59
RPRD1AQ96P16 RNU6-762P-201ENST00000517107 102 ntBASIC-1.12□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 RNU6-409P-201ENST00000384114 104 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 SNORD83B-201ENST00000386745 93 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 RNU6-881P-201ENST00000516813 102 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.14□□□□□ -2.59
RPRD1AQ96P16 RNU6-647P-201ENST00000364243 107 ntBASIC-1.14□□□□□ -2.59
RPRD1AQ96P16 MIR548E-201ENST00000408287 88 ntBASIC-1.14□□□□□ -2.59
RPRD1AQ96P16 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.14□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 MIR451A-201ENST00000385059 72 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 RNU6-721P-201ENST00000410155 105 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 AL118496.2-201ENST00000448300 230 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 SNORD2-201ENST00000459163 69 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 AC097510.1-201ENST00000510945 133 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 AL442128.1-201ENST00000615151 90 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.16□□□□□ -2.6
RPRD1AQ96P16 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
RPRD1AQ96P16 RNU6-151P-201ENST00000364158 107 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 RNU6-973P-201ENST00000364690 107 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 SNORA13-201ENST00000458790 133 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 SCARNA17-201ENST00000516183 144 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 SNORA81.3-201ENST00000517283 198 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.18□□□□□ -2.6
RPRD1AQ96P16 RNU6-476P-201ENST00000384726 107 ntBASIC-1.18□□□□□ -2.6
RPRD1AQ96P16 RNU6-75P-201ENST00000515944 104 ntBASIC-1.18□□□□□ -2.6
RPRD1AQ96P16 RNU6-861P-201ENST00000516745 106 ntBASIC-1.18□□□□□ -2.6
RPRD1AQ96P16 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 RNU4-36P-201ENST00000364294 144 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 RNU6-781P-201ENST00000516377 101 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 RNA5SP67-201ENST00000516422 131 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 RNU6-502P-201ENST00000362419 108 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 SNORD114-25-201ENST00000363742 72 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 SNORD114-4-201ENST00000363962 75 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 U3.27-201ENST00000391237 200 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 AL500527.2-201ENST00000454105 95 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 SNORD42B-201ENST00000458893 67 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 MIR5704-201ENST00000584029 77 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 MTND5P18-201ENST00000445624 1801 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 MIR409-201ENST00000362237 79 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 RNU6-682P-201ENST00000363843 106 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 RNU6-816P-201ENST00000390914 107 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.22□□□□□ -2.6
RPRD1AQ96P16 MIR518B-201ENST00000385127 83 ntBASIC-1.22□□□□□ -2.6
RPRD1AQ96P16 AL158147.1-201ENST00000443970 75 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 245.3 ms