Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AP000533.3-201ENST00000447704 118 ntBASIC-1.39□□□□□ -2.63
CLHC1Q8NHS4 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.4□□□□□ -2.63
CLHC1Q8NHS4 RNU6-312P-201ENST00000364629 107 ntBASIC-1.4□□□□□ -2.63
CLHC1Q8NHS4 RNY3P14-201ENST00000384309 102 ntBASIC-1.4□□□□□ -2.63
CLHC1Q8NHS4 MIR548H3-201ENST00000408771 118 ntBASIC-1.4□□□□□ -2.63
CLHC1Q8NHS4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.4□□□□□ -2.63
CLHC1Q8NHS4 AC097510.1-201ENST00000510945 133 ntBASIC-1.4□□□□□ -2.63
CLHC1Q8NHS4 MIR1255B1-201ENST00000636325 63 ntBASIC-1.4□□□□□ -2.63
CLHC1Q8NHS4 RNU6-592P-201ENST00000411333 103 ntBASIC-1.41□□□□□ -2.64
CLHC1Q8NHS4 uc_338.19-201ENST00000616808 99 ntBASIC-1.41□□□□□ -2.64
CLHC1Q8NHS4 MIR8068-201ENST00000618032 68 ntBASIC-1.41□□□□□ -2.64
CLHC1Q8NHS4 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.42□□□□□ -2.64
CLHC1Q8NHS4 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.42□□□□□ -2.64
CLHC1Q8NHS4 RNA5SP461-201ENST00000516451 104 ntBASIC-1.42□□□□□ -2.64
CLHC1Q8NHS4 RNA5SP470-201ENST00000516463 106 ntBASIC-1.42□□□□□ -2.64
CLHC1Q8NHS4 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.42□□□□□ -2.64
CLHC1Q8NHS4 AP002392.1-201ENST00000537692 208 ntBASIC-1.42□□□□□ -2.64
CLHC1Q8NHS4 RNY1P11-201ENST00000363759 113 ntBASIC-1.43□□□□□ -2.64
CLHC1Q8NHS4 SNORA33.2-201ENST00000365413 134 ntBASIC-1.43□□□□□ -2.64
CLHC1Q8NHS4 RNU6-918P-201ENST00000391219 106 ntBASIC-1.43□□□□□ -2.64
CLHC1Q8NHS4 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.43□□□□□ -2.64
CLHC1Q8NHS4 RNU6-635P-201ENST00000516651 102 ntBASIC-1.43□□□□□ -2.64
CLHC1Q8NHS4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.43□□□□□ -2.64
CLHC1Q8NHS4 AC021753.1-201ENST00000635724 168 ntBASIC-1.43□□□□□ -2.64
CLHC1Q8NHS4 AL512310.12-203ENST00000640543 90 ntBASIC-1.43□□□□□ -2.64
CLHC1Q8NHS4 SNORD115-23-201ENST00000364461 82 ntBASIC-1.44□□□□□ -2.64
CLHC1Q8NHS4 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.44□□□□□ -2.64
CLHC1Q8NHS4 RNU6-639P-201ENST00000384074 107 ntBASIC-1.44□□□□□ -2.64
CLHC1Q8NHS4 MIR451A-201ENST00000385059 72 ntBASIC-1.44□□□□□ -2.64
CLHC1Q8NHS4 AL353813.1-201ENST00000440700 253 ntBASIC-1.44□□□□□ -2.64
CLHC1Q8NHS4 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.44□□□□□ -2.64
CLHC1Q8NHS4 RNU6-762P-201ENST00000517107 102 ntBASIC-1.44□□□□□ -2.64
CLHC1Q8NHS4 MIR6773-201ENST00000612812 74 ntBASIC-1.44□□□□□ -2.64
CLHC1Q8NHS4 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.45□□□□□ -2.64
CLHC1Q8NHS4 MIR147A-201ENST00000385079 72 ntBASIC-1.45□□□□□ -2.64
CLHC1Q8NHS4 SNORA7.5-201ENST00000410672 110 ntBASIC-1.45□□□□□ -2.64
CLHC1Q8NHS4 SNORD42B-201ENST00000458893 67 ntBASIC-1.45□□□□□ -2.64
CLHC1Q8NHS4 RN7SKP19-201ENST00000516016 252 ntBASIC-1.45□□□□□ -2.64
CLHC1Q8NHS4 MIR4499-201ENST00000584834 69 ntBASIC-1.45□□□□□ -2.64
CLHC1Q8NHS4 MIR4723-201ENST00000585070 81 ntBASIC-1.45□□□□□ -2.64
CLHC1Q8NHS4 RNU6-363P-201ENST00000362895 105 ntBASIC-1.46□□□□□ -2.64
CLHC1Q8NHS4 MTND2P23-201ENST00000422990 651 ntBASIC-1.46□□□□□ -2.64
CLHC1Q8NHS4 RNU7-121P-201ENST00000516604 62 ntBASIC-1.46□□□□□ -2.64
CLHC1Q8NHS4 snoR1.1-201ENST00000628177 80 ntBASIC-1.46□□□□□ -2.64
CLHC1Q8NHS4 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.47□□□□□ -2.64
CLHC1Q8NHS4 MIRLET7B-201ENST00000385140 83 ntBASIC-1.47□□□□□ -2.64
CLHC1Q8NHS4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.47□□□□□ -2.64
CLHC1Q8NHS4 RNU6-431P-201ENST00000383874 107 ntBASIC-1.48□□□□□ -2.65
CLHC1Q8NHS4 RNU6-905P-201ENST00000384434 107 ntBASIC-1.48□□□□□ -2.65
CLHC1Q8NHS4 RNU6-239P-201ENST00000390990 99 ntBASIC-1.48□□□□□ -2.65
CLHC1Q8NHS4 SNORD127-201ENST00000458892 86 ntBASIC-1.48□□□□□ -2.65
CLHC1Q8NHS4 RNU6-274P-201ENST00000459566 107 ntBASIC-1.48□□□□□ -2.65
CLHC1Q8NHS4 AC140658.3-201ENST00000567603 271 ntBASIC-1.48□□□□□ -2.65
CLHC1Q8NHS4 RNU6-238P-201ENST00000363313 106 ntBASIC-1.49□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.49□□□□□ -2.65
CLHC1Q8NHS4 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.49□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.49□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.49□□□□□ -2.65
CLHC1Q8NHS4 RNU6-337P-201ENST00000391243 106 ntBASIC-1.49□□□□□ -2.65
CLHC1Q8NHS4 RNU2-38P-201ENST00000410856 79 ntBASIC-1.49□□□□□ -2.65
CLHC1Q8NHS4 RNU6-75P-201ENST00000515944 104 ntBASIC-1.49□□□□□ -2.65
CLHC1Q8NHS4 U4.2-201ENST00000618561 85 ntBASIC-1.49□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.5□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.5□□□□□ -2.65
CLHC1Q8NHS4 SNORD64-201ENST00000386683 67 ntBASIC-1.5□□□□□ -2.65
CLHC1Q8NHS4 MIR759-201ENST00000390224 91 ntBASIC-1.5□□□□□ -2.65
CLHC1Q8NHS4 MIR3121-201ENST00000579680 77 ntBASIC-1.5□□□□□ -2.65
CLHC1Q8NHS4 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.51□□□□□ -2.65
CLHC1Q8NHS4 SNORA63.6-201ENST00000364921 119 ntBASIC-1.51□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.51□□□□□ -2.65
CLHC1Q8NHS4 MIR548D2-201ENST00000384955 97 ntBASIC-1.51□□□□□ -2.65
CLHC1Q8NHS4 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.51□□□□□ -2.65
CLHC1Q8NHS4 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.51□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.52□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.52□□□□□ -2.65
CLHC1Q8NHS4 MTCYBP6-201ENST00000441810 138 ntBASIC-1.52□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.52□□□□□ -2.65
CLHC1Q8NHS4 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.52□□□□□ -2.65
CLHC1Q8NHS4 AC130289.1-201ENST00000577321 73 ntBASIC-1.52□□□□□ -2.65
CLHC1Q8NHS4 MIR4801-201ENST00000582704 82 ntBASIC-1.52□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.52□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.52□□□□□ -2.65
CLHC1Q8NHS4 MIR3658-201ENST00000636291 56 ntBASIC-1.52□□□□□ -2.65
CLHC1Q8NHS4 SNORA62.4-201ENST00000365504 151 ntBASIC-1.53□□□□□ -2.65
CLHC1Q8NHS4 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.53□□□□□ -2.65
CLHC1Q8NHS4 SNORD37.2-201ENST00000391075 66 ntBASIC-1.53□□□□□ -2.65
CLHC1Q8NHS4 RNA5SP136-201ENST00000410906 107 ntBASIC-1.53□□□□□ -2.65
CLHC1Q8NHS4 SCARNA18B-201ENST00000458806 135 ntBASIC-1.53□□□□□ -2.65
CLHC1Q8NHS4 MTATP8P1-201ENST00000467115 207 ntBASIC-1.53□□□□□ -2.65
CLHC1Q8NHS4 AL442128.1-201ENST00000615151 90 ntBASIC-1.53□□□□□ -2.65
CLHC1Q8NHS4 MIR382-201ENST00000637119 76 ntBASIC-1.53□□□□□ -2.65
CLHC1Q8NHS4 MIR548F4-201ENST00000408515 105 ntBASIC-1.54□□□□□ -2.66
CLHC1Q8NHS4 SNORD18.2-201ENST00000459604 70 ntBASIC-1.54□□□□□ -2.66
CLHC1Q8NHS4 RNU4-71P-201ENST00000516258 113 ntBASIC-1.54□□□□□ -2.66
CLHC1Q8NHS4 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.55□□□□□ -2.66
CLHC1Q8NHS4 RNU6-409P-201ENST00000384114 104 ntBASIC-1.55□□□□□ -2.66
CLHC1Q8NHS4 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.55□□□□□ -2.66
CLHC1Q8NHS4 RNA5SP180-201ENST00000516181 101 ntBASIC-1.55□□□□□ -2.66
CLHC1Q8NHS4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.55□□□□□ -2.66
CLHC1Q8NHS4 MIR365A-201ENST00000362260 87 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 1390.2 ms