Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MIR216B-201ENST00000390186 82 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 RNU7-85P-201ENST00000458851 63 ntBASIC-0.31□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU6-495P-201ENST00000362995 107 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU6-431P-201ENST00000383874 107 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU6-519P-201ENST00000410590 108 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU6-651P-201ENST00000411040 105 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 MIR4536-1-201ENST00000583537 88 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 snoU18.1-201ENST00000629629 71 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 SNORA2.1-201ENST00000363089 137 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 SNORD27-201ENST00000363981 72 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 U4.1-201ENST00000620349 87 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU6-208P-201ENST00000362431 107 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 MIR616-201ENST00000385293 97 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 MIR1252-201ENST00000408861 65 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU2-38P-201ENST00000410856 79 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 AL445584.3-201ENST00000617173 78 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNY3P15-201ENST00000516297 97 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 SNORD114-17-201ENST00000364699 75 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU6-493P-201ENST00000391321 108 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 MIR889-201ENST00000401280 79 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 MIR3163-201ENST00000581592 73 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 AC080013.6-201ENST00000606185 215 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU6-226P-201ENST00000363778 107 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 MT-TD-201ENST00000387419 68 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU6-337P-201ENST00000391243 106 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 ELOCP20-201ENST00000422460 345 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 AC108059.2-201ENST00000434626 151 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU6-412P-201ENST00000516434 106 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 RNU7-164P-201ENST00000459221 62 ntBASIC-0.32□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU6-690P-201ENST00000365242 106 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU4-14P-201ENST00000410858 122 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 MTND2P23-201ENST00000422990 651 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 SNORD115-27-201ENST00000364430 82 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU6-935P-201ENST00000410371 100 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 SNORD127-201ENST00000458892 86 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 MIR5591-201ENST00000578248 65 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 MT-TW-201ENST00000387382 68 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 AC134503.1-201ENST00000633048 54 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 U6.100-201ENST00000636230 99 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU6-647P-201ENST00000364243 107 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU6-643P-201ENST00000384018 107 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 MT-TT-201ENST00000387460 66 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 AL512310.12-203ENST00000640543 90 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 MIR1302-6-201ENST00000408466 90 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 AC138393.2-201ENST00000414742 246 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 AP002392.1-201ENST00000537692 208 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 MIR548G-201ENST00000408442 89 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 RNU7-121P-201ENST00000516604 62 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 MIR4308-201ENST00000580634 81 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 AL442128.1-201ENST00000615151 90 ntBASIC-0.33□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNA5SP292-201ENST00000390974 118 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU6-924P-201ENST00000362926 108 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU6-381P-201ENST00000391259 108 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU4-71P-201ENST00000516258 113 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 MIR3920-201ENST00000581751 86 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU6-937P-201ENST00000384325 106 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 Z83846.1-201ENST00000446798 265 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU6-168P-201ENST00000516189 101 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNU6-781P-201ENST00000516377 101 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 MIR4696-201ENST00000581431 70 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 AC084782.3-201ENST00000612282 578 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 RNA5SP405-201ENST00000363059 114 ntBASIC-0.34□□□□□ -2.46
SYNE1Q8NF91 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms