Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.41□□□□□ -2.63
CSMD3Q7Z407 RNU6-662P-201ENST00000384253 104 ntBASIC-1.41□□□□□ -2.64
CSMD3Q7Z407 SNORD19-201ENST00000391191 68 ntBASIC-1.41□□□□□ -2.64
CSMD3Q7Z407 RNA5SP236-201ENST00000516169 116 ntBASIC-1.41□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.41□□□□□ -2.64
CSMD3Q7Z407 AC073869.6-201ENST00000640656 341 ntBASIC-1.41□□□□□ -2.64
CSMD3Q7Z407 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.41□□□□□ -2.64
CSMD3Q7Z407 RNU4-90P-201ENST00000362773 141 ntBASIC-1.41□□□□□ -2.64
CSMD3Q7Z407 RNU6-563P-201ENST00000364872 108 ntBASIC-1.41□□□□□ -2.64
CSMD3Q7Z407 MTND3P22-201ENST00000510932 243 ntBASIC-1.41□□□□□ -2.64
CSMD3Q7Z407 RNU6-507P-201ENST00000516045 100 ntBASIC-1.41□□□□□ -2.64
CSMD3Q7Z407 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.41□□□□□ -2.64
CSMD3Q7Z407 SNORD115-22-201ENST00000364456 82 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 MIR203A-201ENST00000384836 110 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 RNU6-908P-201ENST00000410160 94 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 RNU6-246P-201ENST00000384702 107 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 MIR5693-201ENST00000577722 73 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 MIR34C-201ENST00000384831 77 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 MIR548U-201ENST00000390728 81 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 RNU2-38P-201ENST00000410856 79 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 RNU7-169P-201ENST00000459456 61 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 RNU6-120P-201ENST00000516077 103 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 AP002392.1-201ENST00000537692 208 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.42□□□□□ -2.64
CSMD3Q7Z407 RNU6-990P-201ENST00000364385 104 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 MIR548A1-201ENST00000385041 97 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 RNU6-101P-201ENST00000410323 104 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 MIR6739-201ENST00000622461 75 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 SNORA25.1-201ENST00000362326 128 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 RNU6-630P-201ENST00000391258 106 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 RNU7-88P-201ENST00000458752 63 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 MIR4272-201ENST00000635924 64 ntBASIC-1.43□□□□□ -2.64
CSMD3Q7Z407 SNORA33.1-201ENST00000364957 130 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 RNU6-211P-201ENST00000384047 107 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 RNU7-123P-201ENST00000515911 60 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 RNU6-415P-201ENST00000516252 97 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 SNORD116-25-201ENST00000516517 92 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 MIR548W-201ENST00000581970 74 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 MTND5P26-201ENST00000426018 1752 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 AC096644.2-201ENST00000429278 159 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 snoU18.1-201ENST00000629629 71 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 RNU6-451P-201ENST00000362921 107 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 SNORD38.1-201ENST00000363863 68 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 AC084782.3-201ENST00000612282 578 ntBASIC-1.44□□□□□ -2.64
CSMD3Q7Z407 RNU6-774P-201ENST00000363238 107 ntBASIC-1.45□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.45□□□□□ -2.64
CSMD3Q7Z407 CYP3A54P-201ENST00000566950 75 ntBASIC-1.45□□□□□ -2.64
CSMD3Q7Z407 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.45□□□□□ -2.64
CSMD3Q7Z407 MIR6509-201ENST00000614603 85 ntBASIC-1.45□□□□□ -2.64
CSMD3Q7Z407 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.45□□□□□ -2.64
CSMD3Q7Z407 RNU6-807P-201ENST00000516805 107 ntBASIC-1.45□□□□□ -2.64
CSMD3Q7Z407 MIR3163-201ENST00000581592 73 ntBASIC-1.45□□□□□ -2.64
CSMD3Q7Z407 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.45□□□□□ -2.64
CSMD3Q7Z407 U6.106-201ENST00000636360 105 ntBASIC-1.45□□□□□ -2.64
CSMD3Q7Z407 RNU5F-1-201ENST00000362507 117 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 snoU13.17-201ENST00000458802 104 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 AC093424.1-201ENST00000604999 338 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 AC138305.3-201ENST00000624988 240 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 RNU6-382P-201ENST00000365181 106 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 MIR548Q-201ENST00000408404 100 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 RNU6-62P-201ENST00000516526 102 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 RNU6-314P-201ENST00000516574 104 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 MIR4744-201ENST00000581563 82 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 MIR4773-1-201ENST00000637203 78 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 RNU6-608P-201ENST00000383927 104 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 RNU6-643P-201ENST00000384018 107 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 RNU6-937P-201ENST00000384325 106 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 MIR620-201ENST00000385232 95 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 RNU6-130P-201ENST00000411112 103 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 RNU7-6P-201ENST00000516845 62 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 AC021753.1-201ENST00000635724 168 ntBASIC-1.46□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.47□□□□□ -2.64
CSMD3Q7Z407 SNORD2.1-201ENST00000458762 69 ntBASIC-1.47□□□□□ -2.64
CSMD3Q7Z407 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.47□□□□□ -2.65
CSMD3Q7Z407 RNU6-103P-201ENST00000363686 107 ntBASIC-1.47□□□□□ -2.65
CSMD3Q7Z407 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.47□□□□□ -2.65
CSMD3Q7Z407 MIR616-201ENST00000385293 97 ntBASIC-1.47□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms