Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 SNORD115-24-201ENST00000363528 82 ntBASIC2.02□□□□□ -2.09
PTCRAQ6ISU1 RNU6-1039P-201ENST00000383931 107 ntBASIC2.02□□□□□ -2.09
PTCRAQ6ISU1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.02□□□□□ -2.09
PTCRAQ6ISU1 MIR3920-201ENST00000581751 86 ntBASIC2.02□□□□□ -2.09
PTCRAQ6ISU1 MIR8081-201ENST00000611533 95 ntBASIC2.02□□□□□ -2.09
PTCRAQ6ISU1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.02□□□□□ -2.09
PTCRAQ6ISU1 SNORA31.14-201ENST00000516728 116 ntBASIC2.01□□□□□ -2.09
PTCRAQ6ISU1 RNU6-668P-201ENST00000364180 107 ntBASIC2□□□□□ -2.09
PTCRAQ6ISU1 MIR144-201ENST00000384886 86 ntBASIC2□□□□□ -2.09
PTCRAQ6ISU1 MIR100-201ENST00000385259 80 ntBASIC2□□□□□ -2.09
PTCRAQ6ISU1 SNORA67.5-201ENST00000391036 107 ntBASIC2□□□□□ -2.09
PTCRAQ6ISU1 AC079804.2-201ENST00000490376 200 ntBASIC2□□□□□ -2.09
PTCRAQ6ISU1 MIR4303-201ENST00000581299 66 ntBASIC2□□□□□ -2.09
PTCRAQ6ISU1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PTCRAQ6ISU1 MIR934-201ENST00000401241 83 ntBASIC1.99□□□□□ -2.09
PTCRAQ6ISU1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.99□□□□□ -2.09
PTCRAQ6ISU1 MIR5694-201ENST00000581190 76 ntBASIC1.99□□□□□ -2.09
PTCRAQ6ISU1 MIR548AG2-201ENST00000581228 64 ntBASIC1.99□□□□□ -2.09
PTCRAQ6ISU1 MIR6509-201ENST00000614603 85 ntBASIC1.99□□□□□ -2.09
PTCRAQ6ISU1 MIR548O2-201ENST00000616090 70 ntBASIC1.99□□□□□ -2.09
PTCRAQ6ISU1 AC073869.9-201ENST00000641610 120 ntBASIC1.99□□□□□ -2.09
PTCRAQ6ISU1 Y_RNA.32-201ENST00000362589 110 ntBASIC1.98□□□□□ -2.09
PTCRAQ6ISU1 RNU6-1187P-201ENST00000364771 110 ntBASIC1.98□□□□□ -2.09
PTCRAQ6ISU1 AC067940.1-201ENST00000458411 300 ntBASIC1.98□□□□□ -2.09
PTCRAQ6ISU1 RNU6-542P-201ENST00000516405 103 ntBASIC1.98□□□□□ -2.09
PTCRAQ6ISU1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 MIR9-3-201ENST00000385084 90 ntBASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 MIR1276-201ENST00000408707 83 ntBASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 RNU6-141P-201ENST00000410499 105 ntBASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 RNU7-74P-201ENST00000459104 62 ntBASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 AC104435.1-201ENST00000483483 166 ntBASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 AC008834.1-201ENST00000511612 175 ntBASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 SNORD79.1-201ENST00000516069 84 ntBASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 RNU6-982P-201ENST00000516216 102 ntBASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 RNU6-902P-201ENST00000517212 91 ntBASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 RNU7-161P-201ENST00000517289 62 ntBASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 MIR6504-201ENST00000613520 61 ntBASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
PTCRAQ6ISU1 RNU6-910P-201ENST00000390844 107 ntBASIC1.96□□□□□ -2.1
PTCRAQ6ISU1 RNU7-95P-201ENST00000459222 64 ntBASIC1.96□□□□□ -2.1
PTCRAQ6ISU1 RNU6-135P-201ENST00000516769 101 ntBASIC1.96□□□□□ -2.1
PTCRAQ6ISU1 AC067863.3-201ENST00000624172 122 ntBASIC1.96□□□□□ -2.1
PTCRAQ6ISU1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PTCRAQ6ISU1 RNU6-614P-201ENST00000384369 107 ntBASIC1.95□□□□□ -2.1
PTCRAQ6ISU1 MIR520F-201ENST00000384824 87 ntBASIC1.95□□□□□ -2.1
PTCRAQ6ISU1 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
PTCRAQ6ISU1 U6.59-201ENST00000615686 107 ntBASIC1.95□□□□□ -2.1
PTCRAQ6ISU1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.94□□□□□ -2.1
PTCRAQ6ISU1 Y_RNA.375-201ENST00000365625 101 ntBASIC1.94□□□□□ -2.1
PTCRAQ6ISU1 NAMPTP3-201ENST00000569273 224 ntBASIC1.94□□□□□ -2.1
PTCRAQ6ISU1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.94□□□□□ -2.1
PTCRAQ6ISU1 AL157834.3-201ENST00000615543 103 ntBASIC1.94□□□□□ -2.1
PTCRAQ6ISU1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
PTCRAQ6ISU1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
PTCRAQ6ISU1 MIRLET7G-201ENST00000362280 84 ntBASIC1.93□□□□□ -2.1
PTCRAQ6ISU1 MIR519E-201ENST00000385075 84 ntBASIC1.93□□□□□ -2.1
PTCRAQ6ISU1 SNORD12-201ENST00000391002 90 ntBASIC1.93□□□□□ -2.1
PTCRAQ6ISU1 MIR1827-201ENST00000408549 66 ntBASIC1.93□□□□□ -2.1
PTCRAQ6ISU1 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
PTCRAQ6ISU1 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
PTCRAQ6ISU1 AC079150.2-201ENST00000443733 78 ntBASIC1.93□□□□□ -2.1
PTCRAQ6ISU1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.92□□□□□ -2.1
PTCRAQ6ISU1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.92□□□□□ -2.1
PTCRAQ6ISU1 RNU7-104P-201ENST00000459398 79 ntBASIC1.92□□□□□ -2.1
PTCRAQ6ISU1 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
PTCRAQ6ISU1 MIR502-201ENST00000606349 86 ntBASIC1.92□□□□□ -2.1
PTCRAQ6ISU1 AL109933.3-201ENST00000619095 188 ntBASIC1.92□□□□□ -2.1
PTCRAQ6ISU1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PTCRAQ6ISU1 RNU6-260P-201ENST00000384092 107 ntBASIC1.91□□□□□ -2.1
PTCRAQ6ISU1 RNU6-42P-201ENST00000384165 107 ntBASIC1.91□□□□□ -2.1
PTCRAQ6ISU1 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
PTCRAQ6ISU1 MIR5002-201ENST00000584713 97 ntBASIC1.91□□□□□ -2.1
PTCRAQ6ISU1 RNU6-392P-201ENST00000364926 101 ntBASIC1.9□□□□□ -2.11
PTCRAQ6ISU1 RNA5SP480-201ENST00000516840 109 ntBASIC1.9□□□□□ -2.11
PTCRAQ6ISU1 SNORA70.22-201ENST00000517160 124 ntBASIC1.9□□□□□ -2.11
PTCRAQ6ISU1 AP000553.5-201ENST00000641933 54 ntBASIC1.9□□□□□ -2.11
PTCRAQ6ISU1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
PTCRAQ6ISU1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PTCRAQ6ISU1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PTCRAQ6ISU1 RNA5SP117-201ENST00000365294 118 ntBASIC1.89□□□□□ -2.11
PTCRAQ6ISU1 MIR633-201ENST00000384821 98 ntBASIC1.89□□□□□ -2.11
PTCRAQ6ISU1 MIR3657-201ENST00000584818 117 ntBASIC1.89□□□□□ -2.11
PTCRAQ6ISU1 RMST_2.1-201ENST00000617263 136 ntBASIC1.89□□□□□ -2.11
PTCRAQ6ISU1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
PTCRAQ6ISU1 MIR203A-201ENST00000384836 110 ntBASIC1.88□□□□□ -2.11
PTCRAQ6ISU1 RNU1-123P-201ENST00000458950 160 ntBASIC1.88□□□□□ -2.11
PTCRAQ6ISU1 AC092634.7-201ENST00000621022 103 ntBASIC1.88□□□□□ -2.11
PTCRAQ6ISU1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PTCRAQ6ISU1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PTCRAQ6ISU1 RNU6-645P-201ENST00000364649 106 ntBASIC1.87□□□□□ -2.11
PTCRAQ6ISU1 RNU6-1335P-201ENST00000365426 107 ntBASIC1.87□□□□□ -2.11
PTCRAQ6ISU1 RNU6-54P-201ENST00000365563 107 ntBASIC1.87□□□□□ -2.11
PTCRAQ6ISU1 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
PTCRAQ6ISU1 AC002350.1-201ENST00000490759 375 ntBASIC1.87□□□□□ -2.11
PTCRAQ6ISU1 RNU1-40P-201ENST00000516816 164 ntBASIC1.87□□□□□ -2.11
PTCRAQ6ISU1 RNU1-97P-201ENST00000516872 164 ntBASIC1.87□□□□□ -2.11
PTCRAQ6ISU1 MIR4255-201ENST00000579351 72 ntBASIC1.87□□□□□ -2.11
PTCRAQ6ISU1 MIR4452-201ENST00000583004 71 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 1111.4 ms