Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RNU6-480P-201ENST00000384332 107 ntBASIC-0.66□□□□□ -2.51
MSH6P52701 RNU6-460P-201ENST00000391158 108 ntBASIC-0.66□□□□□ -2.51
MSH6P52701 MIR548G-201ENST00000408442 89 ntBASIC-0.66□□□□□ -2.51
MSH6P52701 AC114755.3-201ENST00000481111 251 ntBASIC-0.66□□□□□ -2.51
MSH6P52701 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.66□□□□□ -2.51
MSH6P52701 RNU6-957P-201ENST00000363652 99 ntBASIC-0.67□□□□□ -2.52
MSH6P52701 RNU6-915P-201ENST00000364943 103 ntBASIC-0.67□□□□□ -2.52
MSH6P52701 RNU6-196P-201ENST00000384315 107 ntBASIC-0.67□□□□□ -2.52
MSH6P52701 MTND3P2-201ENST00000438452 342 ntBASIC-0.67□□□□□ -2.52
MSH6P52701 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.67□□□□□ -2.52
MSH6P52701 SNORA81.3-201ENST00000517283 198 ntBASIC-0.67□□□□□ -2.52
MSH6P52701 AP001328.1-201ENST00000528550 176 ntBASIC-0.67□□□□□ -2.52
MSH6P52701 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.68□□□□□ -2.52
MSH6P52701 RNU6-694P-201ENST00000364071 147 ntBASIC-0.68□□□□□ -2.52
MSH6P52701 RNU6-647P-201ENST00000364243 107 ntBASIC-0.68□□□□□ -2.52
MSH6P52701 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.68□□□□□ -2.52
MSH6P52701 RNU6-455P-201ENST00000384681 107 ntBASIC-0.68□□□□□ -2.52
MSH6P52701 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
MSH6P52701 RNU7-120P-201ENST00000459334 63 ntBASIC-0.68□□□□□ -2.52
MSH6P52701 RNU6-861P-201ENST00000516745 106 ntBASIC-0.68□□□□□ -2.52
MSH6P52701 RNU6-682P-201ENST00000363843 106 ntBASIC-0.69□□□□□ -2.52
MSH6P52701 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.69□□□□□ -2.52
MSH6P52701 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.69□□□□□ -2.52
MSH6P52701 MIR548D2-201ENST00000384955 97 ntBASIC-0.69□□□□□ -2.52
MSH6P52701 MIR652-201ENST00000385278 98 ntBASIC-0.69□□□□□ -2.52
MSH6P52701 AC244090.1-201ENST00000441884 93 ntBASIC-0.69□□□□□ -2.52
MSH6P52701 RNA5SP66-201ENST00000517178 101 ntBASIC-0.69□□□□□ -2.52
MSH6P52701 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.69□□□□□ -2.52
MSH6P52701 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.69□□□□□ -2.52
MSH6P52701 AP001340.1-201ENST00000624405 217 ntBASIC-0.69□□□□□ -2.52
MSH6P52701 RNU6-151P-201ENST00000364158 107 ntBASIC-0.7□□□□□ -2.52
MSH6P52701 MIR1263-201ENST00000408324 86 ntBASIC-0.7□□□□□ -2.52
MSH6P52701 AL353813.1-201ENST00000440700 253 ntBASIC-0.7□□□□□ -2.52
MSH6P52701 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.7□□□□□ -2.52
MSH6P52701 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.7□□□□□ -2.52
MSH6P52701 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.7□□□□□ -2.52
MSH6P52701 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.7□□□□□ -2.52
MSH6P52701 RNU6-574P-201ENST00000384265 107 ntBASIC-0.7□□□□□ -2.52
MSH6P52701 MIR9-2-201ENST00000384838 87 ntBASIC-0.7□□□□□ -2.52
MSH6P52701 MIR216B-201ENST00000390186 82 ntBASIC-0.7□□□□□ -2.52
MSH6P52701 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.7□□□□□ -2.52
MSH6P52701 RNU6-664P-201ENST00000362381 107 ntBASIC-0.71□□□□□ -2.52
MSH6P52701 RNU6-235P-201ENST00000362644 107 ntBASIC-0.71□□□□□ -2.52
MSH6P52701 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.71□□□□□ -2.52
MSH6P52701 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.71□□□□□ -2.52
MSH6P52701 MIR4696-201ENST00000581431 70 ntBASIC-0.71□□□□□ -2.52
MSH6P52701 MIR548O2-201ENST00000616090 70 ntBASIC-0.71□□□□□ -2.52
MSH6P52701 AL391099.1-201ENST00000624635 187 ntBASIC-0.71□□□□□ -2.52
MSH6P52701 SNORD101-201ENST00000384027 73 ntBASIC-0.72□□□□□ -2.53
MSH6P52701 RNU6-409P-201ENST00000384114 104 ntBASIC-0.72□□□□□ -2.53
MSH6P52701 RNU6-900P-201ENST00000384498 102 ntBASIC-0.72□□□□□ -2.53
MSH6P52701 MIR513C-201ENST00000401352 84 ntBASIC-0.72□□□□□ -2.53
MSH6P52701 MIR4432-201ENST00000581823 84 ntBASIC-0.72□□□□□ -2.53
MSH6P52701 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.73□□□□□ -2.53
MSH6P52701 MIR1207-201ENST00000408249 87 ntBASIC-0.73□□□□□ -2.53
MSH6P52701 AL158147.1-201ENST00000443970 75 ntBASIC-0.73□□□□□ -2.53
MSH6P52701 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.73□□□□□ -2.53
MSH6P52701 AL442128.1-201ENST00000615151 90 ntBASIC-0.73□□□□□ -2.53
MSH6P52701 RNU6-200P-201ENST00000364743 107 ntBASIC-0.74□□□□□ -2.53
MSH6P52701 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.74□□□□□ -2.53
MSH6P52701 RNU6-463P-201ENST00000384340 107 ntBASIC-0.74□□□□□ -2.53
MSH6P52701 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.74□□□□□ -2.53
MSH6P52701 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 RNY4P6-201ENST00000363667 96 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 MIR587-201ENST00000384845 96 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 RNU6-466P-201ENST00000391224 103 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 RNU6-394P-201ENST00000410735 107 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 AP000676.1-201ENST00000533307 52 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 U4.2-201ENST00000618561 85 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 AC093726.3-201ENST00000637588 150 ntBASIC-0.75□□□□□ -2.53
MSH6P52701 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.76□□□□□ -2.53
MSH6P52701 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.76□□□□□ -2.53
MSH6P52701 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.76□□□□□ -2.53
MSH6P52701 MIR4436A-201ENST00000585278 85 ntBASIC-0.76□□□□□ -2.53
MSH6P52701 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.77□□□□□ -2.53
MSH6P52701 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.77□□□□□ -2.53
MSH6P52701 RNU6-781P-201ENST00000516377 101 ntBASIC-0.77□□□□□ -2.53
MSH6P52701 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.77□□□□□ -2.53
MSH6P52701 MIR548X2-201ENST00000579776 100 ntBASIC-0.77□□□□□ -2.53
MSH6P52701 MIR4280-201ENST00000582178 76 ntBASIC-0.77□□□□□ -2.53
MSH6P52701 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.78□□□□□ -2.53
MSH6P52701 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.78□□□□□ -2.53
MSH6P52701 RNU6-379P-201ENST00000363813 104 ntBASIC-0.78□□□□□ -2.53
MSH6P52701 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.78□□□□□ -2.53
MSH6P52701 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.78□□□□□ -2.53
MSH6P52701 SNORA49-201ENST00000386157 136 ntBASIC-0.78□□□□□ -2.53
MSH6P52701 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.78□□□□□ -2.53
MSH6P52701 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.78□□□□□ -2.53
MSH6P52701 AC145423.2-201ENST00000610631 239 ntBASIC-0.78□□□□□ -2.53
MSH6P52701 SNORD114-14-201ENST00000362723 75 ntBASIC-0.79□□□□□ -2.54
MSH6P52701 RNU6-935P-201ENST00000410371 100 ntBASIC-0.79□□□□□ -2.54
MSH6P52701 RNU7-55P-201ENST00000459426 62 ntBASIC-0.79□□□□□ -2.54
MSH6P52701 AC004792.1-201ENST00000614523 137 ntBASIC-0.79□□□□□ -2.54
MSH6P52701 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.8□□□□□ -2.54
MSH6P52701 SNORD56B-201ENST00000384713 71 ntBASIC-0.8□□□□□ -2.54
MSH6P52701 SNORD2-201ENST00000459163 69 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms