Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MIR539-201ENST00000365690 78 ntBASIC-0.46□□□□□ -2.48
CD74P04233 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.46□□□□□ -2.48
CD74P04233 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.46□□□□□ -2.48
CD74P04233 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.46□□□□□ -2.48
CD74P04233 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
CD74P04233 snoU13.19-201ENST00000459148 104 ntBASIC-0.46□□□□□ -2.48
CD74P04233 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.46□□□□□ -2.48
CD74P04233 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.47□□□□□ -2.48
CD74P04233 RNU6-363P-201ENST00000362895 105 ntBASIC-0.47□□□□□ -2.48
CD74P04233 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.47□□□□□ -2.48
CD74P04233 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.47□□□□□ -2.48
CD74P04233 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.47□□□□□ -2.48
CD74P04233 RNU6-409P-201ENST00000384114 104 ntBASIC-0.47□□□□□ -2.48
CD74P04233 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.47□□□□□ -2.48
CD74P04233 RNU6-781P-201ENST00000516377 101 ntBASIC-0.47□□□□□ -2.48
CD74P04233 MIR4432-201ENST00000581823 84 ntBASIC-0.47□□□□□ -2.48
CD74P04233 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.47□□□□□ -2.48
CD74P04233 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.48□□□□□ -2.49
CD74P04233 RNY4P3-201ENST00000365254 95 ntBASIC-0.48□□□□□ -2.49
CD74P04233 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.48□□□□□ -2.49
CD74P04233 RNU6-455P-201ENST00000384681 107 ntBASIC-0.48□□□□□ -2.49
CD74P04233 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.48□□□□□ -2.49
CD74P04233 AL353813.1-201ENST00000440700 253 ntBASIC-0.48□□□□□ -2.49
CD74P04233 SNORA81.3-201ENST00000517283 198 ntBASIC-0.48□□□□□ -2.49
CD74P04233 MIR548X2-201ENST00000579776 100 ntBASIC-0.48□□□□□ -2.49
CD74P04233 AC004792.1-201ENST00000614523 137 ntBASIC-0.48□□□□□ -2.49
CD74P04233 RNU6-804P-201ENST00000384286 107 ntBASIC-0.49□□□□□ -2.49
CD74P04233 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.49□□□□□ -2.49
CD74P04233 RNU6-466P-201ENST00000391224 103 ntBASIC-0.49□□□□□ -2.49
CD74P04233 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.49□□□□□ -2.49
CD74P04233 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.49□□□□□ -2.49
CD74P04233 AP001340.1-201ENST00000624405 217 ntBASIC-0.49□□□□□ -2.49
CD74P04233 SNORD101-201ENST00000384027 73 ntBASIC-0.5□□□□□ -2.49
CD74P04233 MIR224-201ENST00000384889 81 ntBASIC-0.5□□□□□ -2.49
CD74P04233 MIR652-201ENST00000385278 98 ntBASIC-0.5□□□□□ -2.49
CD74P04233 AL158147.1-201ENST00000443970 75 ntBASIC-0.5□□□□□ -2.49
CD74P04233 snoU13.11-201ENST00000459219 104 ntBASIC-0.5□□□□□ -2.49
CD74P04233 RNA5SP272-201ENST00000516095 111 ntBASIC-0.5□□□□□ -2.49
CD74P04233 AP000676.1-201ENST00000533307 52 ntBASIC-0.5□□□□□ -2.49
CD74P04233 MIR20A-201ENST00000362279 71 ntBASIC-0.51□□□□□ -2.49
CD74P04233 RNU6-235P-201ENST00000362644 107 ntBASIC-0.51□□□□□ -2.49
CD74P04233 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.51□□□□□ -2.49
CD74P04233 RNU6-816P-201ENST00000390914 107 ntBASIC-0.51□□□□□ -2.49
CD74P04233 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.51□□□□□ -2.49
CD74P04233 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.51□□□□□ -2.49
CD74P04233 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.51□□□□□ -2.49
CD74P04233 RNU6-394P-201ENST00000410735 107 ntBASIC-0.51□□□□□ -2.49
CD74P04233 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.51□□□□□ -2.49
CD74P04233 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.51□□□□□ -2.49
CD74P04233 MIR4696-201ENST00000581431 70 ntBASIC-0.51□□□□□ -2.49
CD74P04233 AL391099.1-201ENST00000624635 187 ntBASIC-0.51□□□□□ -2.49
CD74P04233 RNU6-664P-201ENST00000362381 107 ntBASIC-0.52□□□□□ -2.49
CD74P04233 RNY4P6-201ENST00000363667 96 ntBASIC-0.52□□□□□ -2.49
CD74P04233 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.52□□□□□ -2.49
CD74P04233 SNORD56B-201ENST00000384713 71 ntBASIC-0.52□□□□□ -2.49
CD74P04233 MIR9-2-201ENST00000384838 87 ntBASIC-0.52□□□□□ -2.49
CD74P04233 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.52□□□□□ -2.49
CD74P04233 U7.2-201ENST00000607576 63 ntBASIC-0.52□□□□□ -2.49
CD74P04233 AL442128.1-201ENST00000615151 90 ntBASIC-0.52□□□□□ -2.49
CD74P04233 AC099654.10-201ENST00000640395 161 ntBASIC-0.52□□□□□ -2.49
CD74P04233 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.53□□□□□ -2.49
CD74P04233 AL445193.1-201ENST00000441183 141 ntBASIC-0.53□□□□□ -2.49
CD74P04233 RNU6-762P-201ENST00000517107 102 ntBASIC-0.53□□□□□ -2.49
CD74P04233 RNA5SP66-201ENST00000517178 101 ntBASIC-0.53□□□□□ -2.49
CD74P04233 AC007012.1-201ENST00000567192 175 ntBASIC-0.53□□□□□ -2.49
CD74P04233 MIR3144-201ENST00000579460 79 ntBASIC-0.53□□□□□ -2.49
CD74P04233 AC145423.2-201ENST00000610631 239 ntBASIC-0.53□□□□□ -2.49
CD74P04233 AC025166.1-201ENST00000612411 163 ntBASIC-0.53□□□□□ -2.49
CD74P04233 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.54□□□□□ -2.5
CD74P04233 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.54□□□□□ -2.5
CD74P04233 AC244090.1-201ENST00000441884 93 ntBASIC-0.54□□□□□ -2.5
CD74P04233 AC096720.1-201ENST00000604441 183 ntBASIC-0.54□□□□□ -2.5
CD74P04233 RNU6-86P-201ENST00000606534 107 ntBASIC-0.54□□□□□ -2.5
CD74P04233 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.55□□□□□ -2.5
CD74P04233 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.55□□□□□ -2.5
CD74P04233 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.55□□□□□ -2.5
CD74P04233 MIR569-201ENST00000385228 96 ntBASIC-0.55□□□□□ -2.5
CD74P04233 SNORA49-201ENST00000386157 136 ntBASIC-0.55□□□□□ -2.5
CD74P04233 SNORA3B-201ENST00000391305 131 ntBASIC-0.55□□□□□ -2.5
CD74P04233 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.55□□□□□ -2.5
CD74P04233 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.55□□□□□ -2.5
CD74P04233 MIR4280-201ENST00000582178 76 ntBASIC-0.55□□□□□ -2.5
CD74P04233 MTND5P18-201ENST00000445624 1801 ntBASIC-0.55□□□□□ -2.5
CD74P04233 SNORD58C-201ENST00000365223 64 ntBASIC-0.56□□□□□ -2.5
CD74P04233 RNU6-901P-201ENST00000384593 106 ntBASIC-0.56□□□□□ -2.5
CD74P04233 SNORD75.1-201ENST00000408373 60 ntBASIC-0.56□□□□□ -2.5
CD74P04233 RNU6-935P-201ENST00000410371 100 ntBASIC-0.56□□□□□ -2.5
CD74P04233 MIR548O2-201ENST00000616090 70 ntBASIC-0.56□□□□□ -2.5
CD74P04233 MIR216B-201ENST00000390186 82 ntBASIC-0.57□□□□□ -2.5
CD74P04233 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.57□□□□□ -2.5
CD74P04233 AC097510.1-201ENST00000510945 133 ntBASIC-0.57□□□□□ -2.5
CD74P04233 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.57□□□□□ -2.5
CD74P04233 SNORD38.3-201ENST00000516599 73 ntBASIC-0.57□□□□□ -2.5
CD74P04233 SNORD114-14-201ENST00000362723 75 ntBASIC-0.58□□□□□ -2.5
CD74P04233 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.58□□□□□ -2.5
CD74P04233 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.58□□□□□ -2.5
CD74P04233 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.58□□□□□ -2.5
CD74P04233 MIR451A-201ENST00000385059 72 ntBASIC-0.58□□□□□ -2.5
CD74P04233 MT-TQ-201ENST00000387372 72 ntBASIC-0.58□□□□□ -2.5
CD74P04233 RNU6-426P-201ENST00000516464 97 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 274.1 ms