Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR548AB-201ENST00000584917 84 ntBASIC-2.37□□□□□ -2.79
COL6A5A8TX70 AC069545.1-201ENST00000605671 358 ntBASIC-2.37□□□□□ -2.79
COL6A5A8TX70 AC092794.1-201ENST00000612734 582 ntBASIC-2.37□□□□□ -2.79
COL6A5A8TX70 RNU6-353P-201ENST00000364266 108 ntBASIC-2.38□□□□□ -2.79
COL6A5A8TX70 RNU4-69P-201ENST00000410677 143 ntBASIC-2.38□□□□□ -2.79
COL6A5A8TX70 MIR3064-201ENST00000581130 66 ntBASIC-2.38□□□□□ -2.79
COL6A5A8TX70 RNU5E-4P-201ENST00000364931 120 ntBASIC-2.38□□□□□ -2.79
COL6A5A8TX70 RNU6-979P-201ENST00000383896 107 ntBASIC-2.38□□□□□ -2.79
COL6A5A8TX70 RNY1P6-201ENST00000384193 109 ntBASIC-2.38□□□□□ -2.79
COL6A5A8TX70 AC098826.2-201ENST00000452011 651 ntBASIC-2.38□□□□□ -2.79
COL6A5A8TX70 RNU6-982P-201ENST00000516216 102 ntBASIC-2.38□□□□□ -2.79
COL6A5A8TX70 AC139792.2-201ENST00000624218 587 ntBASIC-2.38□□□□□ -2.79
COL6A5A8TX70 Y_RNA.618-201ENST00000410949 107 ntBASIC-2.38□□□□□ -2.79
COL6A5A8TX70 RNU6-82P-201ENST00000363970 107 ntBASIC-2.39□□□□□ -2.79
COL6A5A8TX70 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.39□□□□□ -2.79
COL6A5A8TX70 AL590623.1-201ENST00000427864 105 ntBASIC-2.39□□□□□ -2.79
COL6A5A8TX70 MTCO2P4-201ENST00000517968 247 ntBASIC-2.39□□□□□ -2.79
COL6A5A8TX70 RNU6-434P-201ENST00000384376 107 ntBASIC-2.39□□□□□ -2.79
COL6A5A8TX70 RNU6-933P-201ENST00000384424 107 ntBASIC-2.39□□□□□ -2.79
COL6A5A8TX70 SNORA79-201ENST00000408376 140 ntBASIC-2.39□□□□□ -2.79
COL6A5A8TX70 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.39□□□□□ -2.79
COL6A5A8TX70 RNU7-175P-201ENST00000515915 61 ntBASIC-2.4□□□□□ -2.79
COL6A5A8TX70 uc_338.11-201ENST00000619132 160 ntBASIC-2.4□□□□□ -2.79
COL6A5A8TX70 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.4□□□□□ -2.79
COL6A5A8TX70 RNU6-1013P-201ENST00000384180 107 ntBASIC-2.4□□□□□ -2.79
COL6A5A8TX70 SNORD56.2-201ENST00000363242 71 ntBASIC-2.41□□□□□ -2.8
COL6A5A8TX70 SNORD116.2-201ENST00000391251 93 ntBASIC-2.41□□□□□ -2.8
COL6A5A8TX70 MTCYBP36-201ENST00000404146 440 ntBASIC-2.41□□□□□ -2.8
COL6A5A8TX70 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-2.41□□□□□ -2.8
COL6A5A8TX70 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.41□□□□□ -2.8
COL6A5A8TX70 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.41□□□□□ -2.8
COL6A5A8TX70 RNU6-760P-201ENST00000516078 97 ntBASIC-2.41□□□□□ -2.8
COL6A5A8TX70 AL513043.2-201ENST00000573941 143 ntBASIC-2.41□□□□□ -2.8
COL6A5A8TX70 RNU5F-1-201ENST00000362507 117 ntBASIC-2.42□□□□□ -2.8
COL6A5A8TX70 SNORA40B-201ENST00000385573 128 ntBASIC-2.42□□□□□ -2.8
COL6A5A8TX70 RNU2-55P-201ENST00000411146 174 ntBASIC-2.42□□□□□ -2.8
COL6A5A8TX70 Y_RNA.691-201ENST00000516611 103 ntBASIC-2.42□□□□□ -2.8
COL6A5A8TX70 RNU6-570P-201ENST00000517051 105 ntBASIC-2.42□□□□□ -2.8
COL6A5A8TX70 MTCO3P23-201ENST00000561363 289 ntBASIC-2.42□□□□□ -2.8
COL6A5A8TX70 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.42□□□□□ -2.8
COL6A5A8TX70 RNU6-521P-201ENST00000516663 105 ntBASIC-2.42□□□□□ -2.8
COL6A5A8TX70 SCARNA15-202ENST00000516881 127 ntBASIC-2.42□□□□□ -2.8
COL6A5A8TX70 MIR7110-201ENST00000612638 86 ntBASIC-2.42□□□□□ -2.8
COL6A5A8TX70 RNU5B-1-201ENST00000363286 116 ntBASIC-2.43□□□□□ -2.8
COL6A5A8TX70 SNORD50.2-201ENST00000365465 70 ntBASIC-2.43□□□□□ -2.8
COL6A5A8TX70 AC025521.1-201ENST00000621624 286 ntBASIC-2.43□□□□□ -2.8
COL6A5A8TX70 SNORD50.1-201ENST00000362987 71 ntBASIC-2.43□□□□□ -2.8
COL6A5A8TX70 MIR1-2-201ENST00000384961 85 ntBASIC-2.43□□□□□ -2.8
COL6A5A8TX70 RNU7-85P-201ENST00000458851 63 ntBASIC-2.43□□□□□ -2.8
COL6A5A8TX70 MIR1244-1-201ENST00000612829 85 ntBASIC-2.43□□□□□ -2.8
COL6A5A8TX70 MIR1244-3-201ENST00000635744 85 ntBASIC-2.43□□□□□ -2.8
COL6A5A8TX70 MIR1244-2-201ENST00000636449 85 ntBASIC-2.43□□□□□ -2.8
COL6A5A8TX70 MIR1244-4-202ENST00000636813 85 ntBASIC-2.43□□□□□ -2.8
COL6A5A8TX70 RNU6-681P-201ENST00000364012 104 ntBASIC-2.44□□□□□ -2.8
COL6A5A8TX70 MIR548G-201ENST00000408442 89 ntBASIC-2.44□□□□□ -2.8
COL6A5A8TX70 Y_RNA.672-201ENST00000516289 104 ntBASIC-2.44□□□□□ -2.8
COL6A5A8TX70 AC099654.14-201ENST00000638599 341 ntBASIC-2.44□□□□□ -2.8
COL6A5A8TX70 RNU6-501P-201ENST00000364072 100 ntBASIC-2.44□□□□□ -2.8
COL6A5A8TX70 RNU4-40P-201ENST00000364351 143 ntBASIC-2.44□□□□□ -2.8
COL6A5A8TX70 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.45□□□□□ -2.8
COL6A5A8TX70 RNA5SP292-201ENST00000390974 118 ntBASIC-2.45□□□□□ -2.8
COL6A5A8TX70 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-2.45□□□□□ -2.8
COL6A5A8TX70 RNU6-899P-201ENST00000363947 107 ntBASIC-2.45□□□□□ -2.8
COL6A5A8TX70 MTND1P12-201ENST00000455231 147 ntBASIC-2.46□□□□□ -2.8
COL6A5A8TX70 MTCO2P30-201ENST00000503662 364 ntBASIC-2.46□□□□□ -2.8
COL6A5A8TX70 IGHVII-40-1-201ENST00000517316 58 ntBASIC-2.46□□□□□ -2.8
COL6A5A8TX70 RNU6-103P-201ENST00000363686 107 ntBASIC-2.46□□□□□ -2.8
COL6A5A8TX70 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-2.46□□□□□ -2.8
COL6A5A8TX70 SNORD60.1-201ENST00000362451 73 ntBASIC-2.47□□□□□ -2.8
COL6A5A8TX70 RNU4-68P-201ENST00000364314 141 ntBASIC-2.47□□□□□ -2.8
COL6A5A8TX70 RNU6-99P-201ENST00000364721 107 ntBASIC-2.47□□□□□ -2.8
COL6A5A8TX70 Y_RNA.383-201ENST00000383855 97 ntBASIC-2.47□□□□□ -2.8
COL6A5A8TX70 RNU6-1068P-201ENST00000410958 103 ntBASIC-2.47□□□□□ -2.8
COL6A5A8TX70 AC138907.4-201ENST00000570107 226 ntBASIC-2.47□□□□□ -2.8
COL6A5A8TX70 AL365205.2-201ENST00000594586 68 ntBASIC-2.47□□□□□ -2.8
COL6A5A8TX70 MIR1264-201ENST00000616374 69 ntBASIC-2.47□□□□□ -2.8
COL6A5A8TX70 AL512310.12-203ENST00000640543 90 ntBASIC-2.47□□□□□ -2.8
COL6A5A8TX70 RNU6-383P-201ENST00000410864 94 ntBASIC-2.47□□□□□ -2.81
COL6A5A8TX70 MIR3118-1-201ENST00000581787 76 ntBASIC-2.47□□□□□ -2.81
COL6A5A8TX70 RNU6-153P-201ENST00000364422 104 ntBASIC-2.48□□□□□ -2.81
COL6A5A8TX70 MTND4P24-201ENST00000424002 397 ntBASIC-2.48□□□□□ -2.81
COL6A5A8TX70 AC093424.1-201ENST00000604999 338 ntBASIC-2.48□□□□□ -2.81
COL6A5A8TX70 SNORD115-47-201ENST00000391226 86 ntBASIC-2.48□□□□□ -2.81
COL6A5A8TX70 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-2.48□□□□□ -2.81
COL6A5A8TX70 RNU6-92P-201ENST00000605893 104 ntBASIC-2.48□□□□□ -2.81
COL6A5A8TX70 Y_RNA.399-201ENST00000383955 105 ntBASIC-2.49□□□□□ -2.81
COL6A5A8TX70 AC060780.3-201ENST00000589464 80 ntBASIC-2.49□□□□□ -2.81
COL6A5A8TX70 AC002553.4-201ENST00000616896 331 ntBASIC-2.49□□□□□ -2.81
COL6A5A8TX70 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.49□□□□□ -2.81
COL6A5A8TX70 SNORD45.1-201ENST00000363181 77 ntBASIC-2.5□□□□□ -2.81
COL6A5A8TX70 MTND4LP1-201ENST00000446263 157 ntBASIC-2.5□□□□□ -2.81
COL6A5A8TX70 SNORD27.1-201ENST00000516319 72 ntBASIC-2.5□□□□□ -2.81
COL6A5A8TX70 MIR3144-201ENST00000579460 79 ntBASIC-2.5□□□□□ -2.81
COL6A5A8TX70 RNU6-88P-201ENST00000606801 100 ntBASIC-2.5□□□□□ -2.81
COL6A5A8TX70 Z69908.1-201ENST00000622603 247 ntBASIC-2.5□□□□□ -2.81
COL6A5A8TX70 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.5□□□□□ -2.81
COL6A5A8TX70 Y_RNA.405-201ENST00000383979 100 ntBASIC-2.5□□□□□ -2.81
COL6A5A8TX70 Y_RNA.451-201ENST00000384200 100 ntBASIC-2.5□□□□□ -2.81
COL6A5A8TX70 Y_RNA.524-201ENST00000384564 100 ntBASIC-2.5□□□□□ -2.81
COL6A5A8TX70 RNU6-636P-201ENST00000384598 107 ntBASIC-2.5□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms