Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 snoU13.15-201ENST00000459407 104 ntBASIC2.02□□□□□ -2.09
RCCD1A6NED2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.02□□□□□ -2.09
RCCD1A6NED2 AL136317.1-201ENST00000612653 226 ntBASIC2.02□□□□□ -2.09
RCCD1A6NED2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
RCCD1A6NED2 MIR219B-201ENST00000637023 88 ntBASIC2.02□□□□□ -2.09
RCCD1A6NED2 AC073869.9-201ENST00000641610 120 ntBASIC2.02□□□□□ -2.09
RCCD1A6NED2 SNORD48-201ENST00000364953 64 ntBASIC2.01□□□□□ -2.09
RCCD1A6NED2 RNA5SP117-201ENST00000365294 118 ntBASIC2.01□□□□□ -2.09
RCCD1A6NED2 AL109933.3-201ENST00000619095 188 ntBASIC2.01□□□□□ -2.09
RCCD1A6NED2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
RCCD1A6NED2 MIR203A-201ENST00000384836 110 ntBASIC1.99□□□□□ -2.09
RCCD1A6NED2 AC002350.1-201ENST00000490759 375 ntBASIC1.99□□□□□ -2.09
RCCD1A6NED2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.99□□□□□ -2.09
RCCD1A6NED2 SNORD114-1-201ENST00000362705 72 ntBASIC1.98□□□□□ -2.09
RCCD1A6NED2 SNORA16.1-201ENST00000364597 132 ntBASIC1.98□□□□□ -2.09
RCCD1A6NED2 RNU6-54P-201ENST00000365563 107 ntBASIC1.98□□□□□ -2.09
RCCD1A6NED2 MIR504-201ENST00000385065 83 ntBASIC1.97□□□□□ -2.09
RCCD1A6NED2 AC003989.2-201ENST00000440224 169 ntBASIC1.97□□□□□ -2.09
RCCD1A6NED2 MIR3124-201ENST00000582636 67 ntBASIC1.97□□□□□ -2.09
RCCD1A6NED2 MIR4639-201ENST00000584938 69 ntBASIC1.97□□□□□ -2.09
RCCD1A6NED2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RCCD1A6NED2 ZNF355P-201ENST00000427301 3216 ntBASIC1.97□□□□□ -2.09
RCCD1A6NED2 RNU6-260P-201ENST00000384092 107 ntBASIC1.96□□□□□ -2.1
RCCD1A6NED2 MIR7-2-201ENST00000384970 110 ntBASIC1.96□□□□□ -2.1
RCCD1A6NED2 MIR644A-201ENST00000385262 94 ntBASIC1.96□□□□□ -2.1
RCCD1A6NED2 AC002429.1-201ENST00000437672 148 ntBASIC1.96□□□□□ -2.1
RCCD1A6NED2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RCCD1A6NED2 RNU6-469P-201ENST00000516253 101 ntBASIC1.96□□□□□ -2.1
RCCD1A6NED2 RNU6-542P-201ENST00000516405 103 ntBASIC1.96□□□□□ -2.1
RCCD1A6NED2 MIR4419B-201ENST00000577260 68 ntBASIC1.96□□□□□ -2.1
RCCD1A6NED2 MIR3657-201ENST00000584818 117 ntBASIC1.96□□□□□ -2.1
RCCD1A6NED2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RCCD1A6NED2 RNU6V-201ENST00000384105 107 ntBASIC1.95□□□□□ -2.1
RCCD1A6NED2 MIR222-201ENST00000384992 110 ntBASIC1.95□□□□□ -2.1
RCCD1A6NED2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RCCD1A6NED2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RCCD1A6NED2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RCCD1A6NED2 Y_RNA.375-201ENST00000365625 101 ntBASIC1.94□□□□□ -2.1
RCCD1A6NED2 SNORD41.1-201ENST00000391000 69 ntBASIC1.94□□□□□ -2.1
RCCD1A6NED2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.94□□□□□ -2.1
RCCD1A6NED2 AC244669.1-204ENST00000621564 178 ntBASIC1.94□□□□□ -2.1
RCCD1A6NED2 MIR7843-201ENST00000622274 79 ntBASIC1.94□□□□□ -2.1
RCCD1A6NED2 SNORA7.1-201ENST00000363750 139 ntBASIC1.93□□□□□ -2.1
RCCD1A6NED2 RNU6-645P-201ENST00000364649 106 ntBASIC1.93□□□□□ -2.1
RCCD1A6NED2 SNORD28-201ENST00000384706 75 ntBASIC1.93□□□□□ -2.1
RCCD1A6NED2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.93□□□□□ -2.1
RCCD1A6NED2 MIR548L-201ENST00000408303 86 ntBASIC1.93□□□□□ -2.1
RCCD1A6NED2 AC012493.3-201ENST00000604494 112 ntBASIC1.93□□□□□ -2.1
RCCD1A6NED2 SNORD42B-201ENST00000458893 67 ntBASIC1.92□□□□□ -2.1
RCCD1A6NED2 RNU6-1110P-201ENST00000516462 101 ntBASIC1.92□□□□□ -2.1
RCCD1A6NED2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
RCCD1A6NED2 MIR9-3-201ENST00000385084 90 ntBASIC1.91□□□□□ -2.1
RCCD1A6NED2 MIR1289-2-201ENST00000408360 111 ntBASIC1.91□□□□□ -2.1
RCCD1A6NED2 SNORA2.1-201ENST00000363089 137 ntBASIC1.9□□□□□ -2.11
RCCD1A6NED2 MT-TY-201ENST00000387409 66 ntBASIC1.9□□□□□ -2.11
RCCD1A6NED2 MIR4460-201ENST00000577862 86 ntBASIC1.9□□□□□ -2.11
RCCD1A6NED2 MIR633-201ENST00000384821 98 ntBASIC1.89□□□□□ -2.11
RCCD1A6NED2 SNORD89-201ENST00000390981 114 ntBASIC1.89□□□□□ -2.11
RCCD1A6NED2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RCCD1A6NED2 SNORA25-201ENST00000384384 134 ntBASIC1.88□□□□□ -2.11
RCCD1A6NED2 SNORD105-201ENST00000386910 85 ntBASIC1.88□□□□□ -2.11
RCCD1A6NED2 FABP5P4-201ENST00000437203 171 ntBASIC1.88□□□□□ -2.11
RCCD1A6NED2 AC079150.2-201ENST00000443733 78 ntBASIC1.88□□□□□ -2.11
RCCD1A6NED2 AC092634.7-201ENST00000621022 103 ntBASIC1.88□□□□□ -2.11
RCCD1A6NED2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.88□□□□□ -2.11
RCCD1A6NED2 RNU6-614P-201ENST00000384369 107 ntBASIC1.87□□□□□ -2.11
RCCD1A6NED2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.87□□□□□ -2.11
RCCD1A6NED2 U7.7-201ENST00000459276 60 ntBASIC1.87□□□□□ -2.11
RCCD1A6NED2 MIR4524B-201ENST00000581569 115 ntBASIC1.87□□□□□ -2.11
RCCD1A6NED2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.87□□□□□ -2.11
RCCD1A6NED2 U6.59-201ENST00000615686 107 ntBASIC1.87□□□□□ -2.11
RCCD1A6NED2 RNA5SP363-201ENST00000365072 115 ntBASIC1.86□□□□□ -2.11
RCCD1A6NED2 SNORD18A-201ENST00000363753 72 ntBASIC1.85□□□□□ -2.11
RCCD1A6NED2 RNU6-726P-201ENST00000364680 107 ntBASIC1.85□□□□□ -2.11
RCCD1A6NED2 snoU13.23-201ENST00000458863 104 ntBASIC1.85□□□□□ -2.11
RCCD1A6NED2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.85□□□□□ -2.11
RCCD1A6NED2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.85□□□□□ -2.11
RCCD1A6NED2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
RCCD1A6NED2 RNA5SP215-201ENST00000363440 122 ntBASIC1.84□□□□□ -2.11
RCCD1A6NED2 SNORA25.5-201ENST00000363782 126 ntBASIC1.84□□□□□ -2.11
RCCD1A6NED2 SNORD114-4-201ENST00000363962 75 ntBASIC1.84□□□□□ -2.11
RCCD1A6NED2 MIR583-201ENST00000384846 75 ntBASIC1.84□□□□□ -2.11
RCCD1A6NED2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RCCD1A6NED2 RNU6-141P-201ENST00000410499 105 ntBASIC1.84□□□□□ -2.11
RCCD1A6NED2 AL591806.2-201ENST00000433122 173 ntBASIC1.84□□□□□ -2.11
RCCD1A6NED2 RNA5SP47-201ENST00000517230 109 ntBASIC1.84□□□□□ -2.11
RCCD1A6NED2 RNU1-141P-201ENST00000364623 158 ntBASIC1.83□□□□□ -2.12
RCCD1A6NED2 AC108210.2-201ENST00000503681 201 ntBASIC1.83□□□□□ -2.12
RCCD1A6NED2 RNU6-295P-201ENST00000516901 104 ntBASIC1.83□□□□□ -2.12
RCCD1A6NED2 MIR6739-201ENST00000622461 75 ntBASIC1.83□□□□□ -2.12
RCCD1A6NED2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.82□□□□□ -2.12
RCCD1A6NED2 RNA5SP182-201ENST00000516064 82 ntBASIC1.82□□□□□ -2.12
RCCD1A6NED2 RNA5SP147-201ENST00000516493 109 ntBASIC1.82□□□□□ -2.12
RCCD1A6NED2 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
RCCD1A6NED2 MIR4285-201ENST00000581001 85 ntBASIC1.82□□□□□ -2.12
RCCD1A6NED2 RNA5SP327-201ENST00000362494 101 ntBASIC1.81□□□□□ -2.12
RCCD1A6NED2 RNU6-940P-201ENST00000363433 104 ntBASIC1.81□□□□□ -2.12
RCCD1A6NED2 RNU6-990P-201ENST00000364385 104 ntBASIC1.81□□□□□ -2.12
RCCD1A6NED2 RNU6-716P-201ENST00000365621 103 ntBASIC1.81□□□□□ -2.12
RCCD1A6NED2 SCARNA21.1-201ENST00000515996 128 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms