Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 SNORA25.9-201ENST00000365087 128 ntBASIC1.91□□□□□ -2.1
TMEM259Q4ZIN3 Y_RNA.371-201ENST00000365591 113 ntBASIC1.91□□□□□ -2.1
TMEM259Q4ZIN3 MIR1827-201ENST00000408549 66 ntBASIC1.91□□□□□ -2.1
TMEM259Q4ZIN3 MIR2113-201ENST00000459007 91 ntBASIC1.91□□□□□ -2.1
TMEM259Q4ZIN3 RNA5SP458-201ENST00000516188 119 ntBASIC1.91□□□□□ -2.1
TMEM259Q4ZIN3 RNU6-548P-201ENST00000517083 115 ntBASIC1.91□□□□□ -2.1
TMEM259Q4ZIN3 Y_RNA.239-201ENST00000364444 113 ntBASIC1.9□□□□□ -2.11
TMEM259Q4ZIN3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
TMEM259Q4ZIN3 Y_RNA.207-201ENST00000364142 106 ntBASIC1.89□□□□□ -2.11
TMEM259Q4ZIN3 RNU6-1051P-201ENST00000365471 102 ntBASIC1.89□□□□□ -2.11
TMEM259Q4ZIN3 SNORA40.18-201ENST00000391200 128 ntBASIC1.89□□□□□ -2.11
TMEM259Q4ZIN3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
TMEM259Q4ZIN3 RNA5SP99-201ENST00000364020 114 ntBASIC1.88□□□□□ -2.11
TMEM259Q4ZIN3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TMEM259Q4ZIN3 AC003989.2-201ENST00000440224 169 ntBASIC1.88□□□□□ -2.11
TMEM259Q4ZIN3 Y_RNA.660-201ENST00000516002 120 ntBASIC1.88□□□□□ -2.11
TMEM259Q4ZIN3 MIR4696-201ENST00000581431 70 ntBASIC1.88□□□□□ -2.11
TMEM259Q4ZIN3 AL359821.1-201ENST00000605519 182 ntBASIC1.88□□□□□ -2.11
TMEM259Q4ZIN3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TMEM259Q4ZIN3 MIR337-201ENST00000362281 93 ntBASIC1.87□□□□□ -2.11
TMEM259Q4ZIN3 SNORD115-31-201ENST00000365318 82 ntBASIC1.87□□□□□ -2.11
TMEM259Q4ZIN3 SNORD101-201ENST00000384027 73 ntBASIC1.87□□□□□ -2.11
TMEM259Q4ZIN3 SNORD89-201ENST00000390981 114 ntBASIC1.87□□□□□ -2.11
TMEM259Q4ZIN3 RNU6-380P-201ENST00000410207 107 ntBASIC1.87□□□□□ -2.11
TMEM259Q4ZIN3 AL603825.1-201ENST00000438481 80 ntBASIC1.87□□□□□ -2.11
TMEM259Q4ZIN3 AL136317.1-201ENST00000612653 226 ntBASIC1.87□□□□□ -2.11
TMEM259Q4ZIN3 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.87□□□□□ -2.11
TMEM259Q4ZIN3 RNU6-664P-201ENST00000362381 107 ntBASIC1.86□□□□□ -2.11
TMEM259Q4ZIN3 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
TMEM259Q4ZIN3 Y_RNA.596-201ENST00000410462 109 ntBASIC1.86□□□□□ -2.11
TMEM259Q4ZIN3 AC074348.1-201ENST00000426503 132 ntBASIC1.86□□□□□ -2.11
TMEM259Q4ZIN3 RNU6-303P-201ENST00000517091 106 ntBASIC1.86□□□□□ -2.11
TMEM259Q4ZIN3 RMST_2.1-201ENST00000617263 136 ntBASIC1.86□□□□□ -2.11
TMEM259Q4ZIN3 AL353997.5-201ENST00000618886 171 ntBASIC1.86□□□□□ -2.11
TMEM259Q4ZIN3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TMEM259Q4ZIN3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TMEM259Q4ZIN3 RNU6-540P-201ENST00000384622 101 ntBASIC1.85□□□□□ -2.11
TMEM259Q4ZIN3 Y_RNA.681-201ENST00000516445 113 ntBASIC1.85□□□□□ -2.11
TMEM259Q4ZIN3 RNU6-539P-201ENST00000516665 103 ntBASIC1.85□□□□□ -2.11
TMEM259Q4ZIN3 RNU6-807P-201ENST00000516805 107 ntBASIC1.85□□□□□ -2.11
TMEM259Q4ZIN3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.84□□□□□ -2.11
TMEM259Q4ZIN3 Y_RNA.340-201ENST00000365330 92 ntBASIC1.84□□□□□ -2.11
TMEM259Q4ZIN3 RNU6-154P-201ENST00000384306 106 ntBASIC1.84□□□□□ -2.11
TMEM259Q4ZIN3 RNU6-1241P-201ENST00000384536 107 ntBASIC1.84□□□□□ -2.11
TMEM259Q4ZIN3 SNORA31.14-201ENST00000516728 116 ntBASIC1.84□□□□□ -2.11
TMEM259Q4ZIN3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.83□□□□□ -2.12
TMEM259Q4ZIN3 RNU6-587P-201ENST00000391282 106 ntBASIC1.83□□□□□ -2.12
TMEM259Q4ZIN3 FABP5P4-201ENST00000437203 171 ntBASIC1.83□□□□□ -2.12
TMEM259Q4ZIN3 AC244505.6-201ENST00000452829 130 ntBASIC1.83□□□□□ -2.12
TMEM259Q4ZIN3 YWHAEP2-201ENST00000580066 112 ntBASIC1.83□□□□□ -2.12
TMEM259Q4ZIN3 YWHAEP3-201ENST00000582767 121 ntBASIC1.83□□□□□ -2.12
TMEM259Q4ZIN3 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.83□□□□□ -2.12
TMEM259Q4ZIN3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TMEM259Q4ZIN3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TMEM259Q4ZIN3 RNU6-590P-201ENST00000365039 107 ntBASIC1.82□□□□□ -2.12
TMEM259Q4ZIN3 Y_RNA.386-201ENST00000383913 105 ntBASIC1.82□□□□□ -2.12
TMEM259Q4ZIN3 SNORA8.1-201ENST00000384250 140 ntBASIC1.82□□□□□ -2.12
TMEM259Q4ZIN3 RNU6-634P-201ENST00000459134 106 ntBASIC1.82□□□□□ -2.12
TMEM259Q4ZIN3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.82□□□□□ -2.12
TMEM259Q4ZIN3 MIR7111-201ENST00000619751 72 ntBASIC1.82□□□□□ -2.12
TMEM259Q4ZIN3 uc_338.16-201ENST00000621804 95 ntBASIC1.82□□□□□ -2.12
TMEM259Q4ZIN3 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
TMEM259Q4ZIN3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.82□□□□□ -2.12
TMEM259Q4ZIN3 RNU1-17P-201ENST00000363022 152 ntBASIC1.81□□□□□ -2.12
TMEM259Q4ZIN3 Y_RNA.264-201ENST00000364665 102 ntBASIC1.81□□□□□ -2.12
TMEM259Q4ZIN3 RNA5SP117-201ENST00000365294 118 ntBASIC1.81□□□□□ -2.12
TMEM259Q4ZIN3 SNORD30.1-201ENST00000391309 70 ntBASIC1.81□□□□□ -2.12
TMEM259Q4ZIN3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.81□□□□□ -2.12
TMEM259Q4ZIN3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
TMEM259Q4ZIN3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
TMEM259Q4ZIN3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.8□□□□□ -2.12
TMEM259Q4ZIN3 RNU6-824P-201ENST00000363724 104 ntBASIC1.8□□□□□ -2.12
TMEM259Q4ZIN3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.8□□□□□ -2.12
TMEM259Q4ZIN3 MIR1265-201ENST00000408444 86 ntBASIC1.8□□□□□ -2.12
TMEM259Q4ZIN3 MIR4255-201ENST00000579351 72 ntBASIC1.8□□□□□ -2.12
TMEM259Q4ZIN3 MIR1297-201ENST00000637311 77 ntBASIC1.8□□□□□ -2.12
TMEM259Q4ZIN3 RNU5F-1-201ENST00000362507 117 ntBASIC1.79□□□□□ -2.12
TMEM259Q4ZIN3 SNORD115-24-201ENST00000363528 82 ntBASIC1.79□□□□□ -2.12
TMEM259Q4ZIN3 RNU6-340P-201ENST00000364005 107 ntBASIC1.79□□□□□ -2.12
TMEM259Q4ZIN3 RNY4P3-201ENST00000365254 95 ntBASIC1.79□□□□□ -2.12
TMEM259Q4ZIN3 RNU6-649P-201ENST00000384463 107 ntBASIC1.79□□□□□ -2.12
TMEM259Q4ZIN3 MIR154-201ENST00000385243 84 ntBASIC1.79□□□□□ -2.12
TMEM259Q4ZIN3 MIR942-201ENST00000401111 86 ntBASIC1.79□□□□□ -2.12
TMEM259Q4ZIN3 U7.7-201ENST00000459276 60 ntBASIC1.79□□□□□ -2.12
TMEM259Q4ZIN3 RNU6-871P-201ENST00000516122 100 ntBASIC1.79□□□□□ -2.12
TMEM259Q4ZIN3 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.79□□□□□ -2.12
TMEM259Q4ZIN3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
TMEM259Q4ZIN3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.78□□□□□ -2.12
TMEM259Q4ZIN3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.78□□□□□ -2.12
TMEM259Q4ZIN3 MIR451A-201ENST00000385059 72 ntBASIC1.78□□□□□ -2.12
TMEM259Q4ZIN3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TMEM259Q4ZIN3 RNU6-1265P-201ENST00000516342 103 ntBASIC1.78□□□□□ -2.12
TMEM259Q4ZIN3 RNU6-1057P-201ENST00000517162 102 ntBASIC1.78□□□□□ -2.12
TMEM259Q4ZIN3 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
TMEM259Q4ZIN3 SNORD105-201ENST00000386910 85 ntBASIC1.77□□□□□ -2.13
TMEM259Q4ZIN3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.77□□□□□ -2.13
TMEM259Q4ZIN3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.77□□□□□ -2.13
TMEM259Q4ZIN3 MTRNR2L2-201ENST00000604882 87 ntBASIC1.77□□□□□ -2.13
TMEM259Q4ZIN3 RNA5SP190-201ENST00000365222 118 ntBASIC1.76□□□□□ -2.13
TMEM259Q4ZIN3 SNORD45A-201ENST00000384512 84 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms