Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PISRT1.1-201ENST00000616930 107 ntBASIC-3.61□□□□□ -2.99
HMGA1P17096 AL593851.1-201ENST00000426171 157 ntBASIC-3.62□□□□□ -2.99
HMGA1P17096 RNU6-507P-201ENST00000516045 100 ntBASIC-3.62□□□□□ -2.99
HMGA1P17096 Y_RNA.695-201ENST00000516715 107 ntBASIC-3.62□□□□□ -2.99
HMGA1P17096 IGHVII-40-1-201ENST00000517316 58 ntBASIC-3.62□□□□□ -2.99
HMGA1P17096 MIR3913-1-201ENST00000577744 102 ntBASIC-3.62□□□□□ -2.99
HMGA1P17096 AL365205.2-201ENST00000594586 68 ntBASIC-3.62□□□□□ -2.99
HMGA1P17096 MIRLET7F1-201ENST00000362202 87 ntBASIC-3.63□□□□□ -2.99
HMGA1P17096 RNU6-682P-201ENST00000363843 106 ntBASIC-3.63□□□□□ -2.99
HMGA1P17096 Y_RNA.655-201ENST00000515919 96 ntBASIC-3.63□□□□□ -2.99
HMGA1P17096 MTND3P12-201ENST00000559068 328 ntBASIC-3.63□□□□□ -2.99
HMGA1P17096 MIR3140-201ENST00000583685 90 ntBASIC-3.63□□□□□ -2.99
HMGA1P17096 MIR6128-201ENST00000615528 109 ntBASIC-3.63□□□□□ -2.99
HMGA1P17096 Y_RNA.793-201ENST00000411222 111 ntBASIC-3.64□□□□□ -2.99
HMGA1P17096 AC009161.1-201ENST00000417306 376 ntBASIC-3.64□□□□□ -2.99
HMGA1P17096 MIR5692C2-201ENST00000577959 77 ntBASIC-3.64□□□□□ -2.99
HMGA1P17096 U6.92-201ENST00000636464 89 ntBASIC-3.64□□□□□ -2.99
HMGA1P17096 Y_RNA.201-201ENST00000364052 96 ntBASIC-3.65□□□□□ -2.99
HMGA1P17096 SNORD114-13-201ENST00000364377 74 ntBASIC-3.65□□□□□ -2.99
HMGA1P17096 SNORD116-11-201ENST00000383882 92 ntBASIC-3.65□□□□□ -2.99
HMGA1P17096 AC006006.1-201ENST00000603082 144 ntBASIC-3.65□□□□□ -2.99
HMGA1P17096 RNU6-89P-201ENST00000606519 100 ntBASIC-3.65□□□□□ -2.99
HMGA1P17096 AL021368.1-201ENST00000607490 540 ntBASIC-3.65□□□□□ -2.99
HMGA1P17096 Y_RNA.813-201ENST00000364639 102 ntBASIC-3.66□□□□□ -3
HMGA1P17096 RNU6-728P-201ENST00000365375 104 ntBASIC-3.66□□□□□ -3
HMGA1P17096 SNORA69.1-201ENST00000390904 137 ntBASIC-3.66□□□□□ -3
HMGA1P17096 Y_RNA.592-201ENST00000410274 109 ntBASIC-3.66□□□□□ -3
HMGA1P17096 RNU6-864P-201ENST00000516256 108 ntBASIC-3.66□□□□□ -3
HMGA1P17096 AC007485.1-201ENST00000616755 206 ntBASIC-3.66□□□□□ -3
HMGA1P17096 Y_RNA.24-201ENST00000362508 103 ntBASIC-3.67□□□□□ -3
HMGA1P17096 Y_RNA.296-201ENST00000364930 108 ntBASIC-3.67□□□□□ -3
HMGA1P17096 RNU6-261P-201ENST00000459506 102 ntBASIC-3.67□□□□□ -3
HMGA1P17096 MT-TT-201ENST00000387460 66 ntBASIC-3.68□□□□□ -3
HMGA1P17096 RNU6-1214P-201ENST00000363650 109 ntBASIC-3.69□□□□□ -3
HMGA1P17096 RNU6-260P-201ENST00000384092 107 ntBASIC-3.69□□□□□ -3
HMGA1P17096 SNORD5.1-201ENST00000458800 75 ntBASIC-3.69□□□□□ -3
HMGA1P17096 AL606534.2-204ENST00000635008 178 ntBASIC-3.69□□□□□ -3
HMGA1P17096 TPTEP1-208ENST00000636884 213 ntBASIC-3.69□□□□□ -3
HMGA1P17096 RNU6-99P-201ENST00000364721 107 ntBASIC-3.7□□□□□ -3
HMGA1P17096 Y_RNA.357-201ENST00000365487 109 ntBASIC-3.7□□□□□ -3
HMGA1P17096 RNU7-169P-201ENST00000459456 61 ntBASIC-3.7□□□□□ -3
HMGA1P17096 RNU7-66P-201ENST00000459469 62 ntBASIC-3.7□□□□□ -3
HMGA1P17096 AC019235.1-201ENST00000503847 207 ntBASIC-3.7□□□□□ -3
HMGA1P17096 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.7□□□□□ -3
HMGA1P17096 MIR5688-201ENST00000580619 83 ntBASIC-3.7□□□□□ -3
HMGA1P17096 AC005520.4-201ENST00000604337 90 ntBASIC-3.7□□□□□ -3
HMGA1P17096 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.71□□□□□ -3
HMGA1P17096 RNU6-519P-201ENST00000410590 108 ntBASIC-3.71□□□□□ -3
HMGA1P17096 Y_RNA.615-201ENST00000410769 117 ntBASIC-3.71□□□□□ -3
HMGA1P17096 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-3.71□□□□□ -3
HMGA1P17096 RNU7-164P-201ENST00000459221 62 ntBASIC-3.71□□□□□ -3
HMGA1P17096 MTND3P22-201ENST00000510932 243 ntBASIC-3.71□□□□□ -3
HMGA1P17096 RNU7-123P-201ENST00000515911 60 ntBASIC-3.71□□□□□ -3
HMGA1P17096 AC119751.7-201ENST00000600494 245 ntBASIC-3.71□□□□□ -3
HMGA1P17096 AC021443.1-201ENST00000604478 211 ntBASIC-3.71□□□□□ -3
HMGA1P17096 SNORD18C-201ENST00000362704 69 ntBASIC-3.72□□□□□ -3
HMGA1P17096 MIR526A2-201ENST00000390198 65 ntBASIC-3.72□□□□□ -3
HMGA1P17096 RNU6-75P-201ENST00000515944 104 ntBASIC-3.72□□□□□ -3
HMGA1P17096 RNU6-764P-201ENST00000516396 105 ntBASIC-3.72□□□□□ -3
HMGA1P17096 RNU6-1213P-201ENST00000517075 94 ntBASIC-3.72□□□□□ -3
HMGA1P17096 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.73□□□□□ -3.01
HMGA1P17096 RNU6-248P-201ENST00000410720 107 ntBASIC-3.73□□□□□ -3.01
HMGA1P17096 RNU2-38P-201ENST00000410856 79 ntBASIC-3.73□□□□□ -3.01
HMGA1P17096 MTATP6P21-201ENST00000440681 189 ntBASIC-3.73□□□□□ -3.01
HMGA1P17096 RNU7-24P-201ENST00000458867 62 ntBASIC-3.73□□□□□ -3.01
HMGA1P17096 SNORA63.2-201ENST00000362603 126 ntBASIC-3.74□□□□□ -3.01
HMGA1P17096 RNU6-995P-201ENST00000391244 107 ntBASIC-3.74□□□□□ -3.01
HMGA1P17096 MTCO2P19-201ENST00000427513 598 ntBASIC-3.74□□□□□ -3.01
HMGA1P17096 RNU6-358P-201ENST00000516564 75 ntBASIC-3.74□□□□□ -3.01
HMGA1P17096 AC022079.1-201ENST00000621546 602 ntBASIC-3.74□□□□□ -3.01
HMGA1P17096 AC090617.10-201ENST00000624308 134 ntBASIC-3.74□□□□□ -3.01
HMGA1P17096 RNU6-696P-201ENST00000390834 107 ntBASIC-3.75□□□□□ -3.01
HMGA1P17096 RNU6-1129P-201ENST00000515964 104 ntBASIC-3.75□□□□□ -3.01
HMGA1P17096 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.75□□□□□ -3.01
HMGA1P17096 RNU6-521P-201ENST00000516663 105 ntBASIC-3.75□□□□□ -3.01
HMGA1P17096 MIR6509-201ENST00000614603 85 ntBASIC-3.75□□□□□ -3.01
HMGA1P17096 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.76□□□□□ -3.01
HMGA1P17096 SNORD42A-201ENST00000459584 64 ntBASIC-3.76□□□□□ -3.01
HMGA1P17096 RNU6-240P-201ENST00000516098 97 ntBASIC-3.76□□□□□ -3.01
HMGA1P17096 AC048344.4-201ENST00000619744 527 ntBASIC-3.76□□□□□ -3.01
HMGA1P17096 Y_RNA.424-201ENST00000384063 103 ntBASIC-3.77□□□□□ -3.01
HMGA1P17096 AL021921.1-201ENST00000442774 93 ntBASIC-3.77□□□□□ -3.01
HMGA1P17096 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-3.77□□□□□ -3.01
HMGA1P17096 MIR3657-201ENST00000584818 117 ntBASIC-3.77□□□□□ -3.01
HMGA1P17096 UBE2WP1-201ENST00000362030 340 ntBASIC-3.78□□□□□ -3.01
HMGA1P17096 Y_RNA.286-201ENST00000364813 102 ntBASIC-3.78□□□□□ -3.01
HMGA1P17096 SNORA75-201ENST00000384158 137 ntBASIC-3.78□□□□□ -3.01
HMGA1P17096 Y_RNA.462-201ENST00000384268 102 ntBASIC-3.78□□□□□ -3.01
HMGA1P17096 MT-TH-201ENST00000387441 69 ntBASIC-3.78□□□□□ -3.01
HMGA1P17096 RNU6-65P-201ENST00000516332 98 ntBASIC-3.78□□□□□ -3.01
HMGA1P17096 AC138907.4-201ENST00000570107 226 ntBASIC-3.78□□□□□ -3.01
HMGA1P17096 VN1R91P-201ENST00000594377 169 ntBASIC-3.78□□□□□ -3.01
HMGA1P17096 AL359920.1-201ENST00000618332 176 ntBASIC-3.78□□□□□ -3.01
HMGA1P17096 RNU6-832P-201ENST00000363319 107 ntBASIC-3.79□□□□□ -3.02
HMGA1P17096 RNU6-382P-201ENST00000365181 106 ntBASIC-3.79□□□□□ -3.02
HMGA1P17096 Y_RNA.418-201ENST00000384029 102 ntBASIC-3.79□□□□□ -3.02
HMGA1P17096 RNU6-1257P-201ENST00000384625 110 ntBASIC-3.79□□□□□ -3.02
HMGA1P17096 MIR548G-201ENST00000408442 89 ntBASIC-3.79□□□□□ -3.02
HMGA1P17096 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.79□□□□□ -3.02
HMGA1P17096 MIR3646-201ENST00000578301 84 ntBASIC-3.79□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 280.5 ms