Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL078595.1-201ENST00000404458 226 ntBASIC-0.27□□□□□ -2.45
PDLIM1O00151 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.27□□□□□ -2.45
PDLIM1O00151 RNU6-90P-201ENST00000606352 106 ntBASIC-0.27□□□□□ -2.45
PDLIM1O00151 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.28□□□□□ -2.45
PDLIM1O00151 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.28□□□□□ -2.45
PDLIM1O00151 RNU6-781P-201ENST00000516377 101 ntBASIC-0.28□□□□□ -2.45
PDLIM1O00151 RNA5SP285-201ENST00000516619 119 ntBASIC-0.28□□□□□ -2.45
PDLIM1O00151 CR383656.4-201ENST00000546909 122 ntBASIC-0.28□□□□□ -2.45
PDLIM1O00151 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.28□□□□□ -2.45
PDLIM1O00151 RNU6-363P-201ENST00000362895 105 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 RNY4P6-201ENST00000363667 96 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 RNU6-409P-201ENST00000384114 104 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 MIR106A-201ENST00000384870 81 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 MIR519E-201ENST00000385075 84 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 MIR569-201ENST00000385228 96 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 MIR548G-201ENST00000408442 89 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 MIR4473-201ENST00000583731 91 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 uc_338.10-201ENST00000621872 182 ntBASIC-0.29□□□□□ -2.46
PDLIM1O00151 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.3□□□□□ -2.46
PDLIM1O00151 RNU6-235P-201ENST00000362644 107 ntBASIC-0.3□□□□□ -2.46
PDLIM1O00151 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.3□□□□□ -2.46
PDLIM1O00151 SNORD38.1-201ENST00000363863 68 ntBASIC-0.3□□□□□ -2.46
PDLIM1O00151 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.3□□□□□ -2.46
PDLIM1O00151 MIR214-201ENST00000385214 110 ntBASIC-0.3□□□□□ -2.46
PDLIM1O00151 RNA5SP272-201ENST00000516095 111 ntBASIC-0.3□□□□□ -2.46
PDLIM1O00151 MIR4460-201ENST00000577862 86 ntBASIC-0.3□□□□□ -2.46
PDLIM1O00151 YWHAEP2-201ENST00000580066 112 ntBASIC-0.3□□□□□ -2.46
PDLIM1O00151 MIR548AG2-201ENST00000581228 64 ntBASIC-0.3□□□□□ -2.46
PDLIM1O00151 AC069503.3-201ENST00000618674 145 ntBASIC-0.3□□□□□ -2.46
PDLIM1O00151 SNORA18.1-201ENST00000363418 128 ntBASIC-0.31□□□□□ -2.46
PDLIM1O00151 RNU6-46P-201ENST00000383860 107 ntBASIC-0.31□□□□□ -2.46
PDLIM1O00151 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.31□□□□□ -2.46
PDLIM1O00151 MIR876-201ENST00000401147 81 ntBASIC-0.31□□□□□ -2.46
PDLIM1O00151 MIR2113-201ENST00000459007 91 ntBASIC-0.31□□□□□ -2.46
PDLIM1O00151 SNORD4A-201ENST00000459174 72 ntBASIC-0.31□□□□□ -2.46
PDLIM1O00151 RNU6-287P-201ENST00000516230 98 ntBASIC-0.31□□□□□ -2.46
PDLIM1O00151 TRDV1-202ENST00000621643 102 ntBASIC-0.31□□□□□ -2.46
PDLIM1O00151 SNORD36A-201ENST00000362874 73 ntBASIC-0.32□□□□□ -2.46
PDLIM1O00151 AL161932.1-201ENST00000437408 146 ntBASIC-0.32□□□□□ -2.46
PDLIM1O00151 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.32□□□□□ -2.46
PDLIM1O00151 AL670379.3-201ENST00000605040 251 ntBASIC-0.32□□□□□ -2.46
PDLIM1O00151 AC025166.1-201ENST00000612411 163 ntBASIC-0.32□□□□□ -2.46
PDLIM1O00151 FTX_2.1-201ENST00000618816 94 ntBASIC-0.32□□□□□ -2.46
PDLIM1O00151 MIR6759-201ENST00000638110 65 ntBASIC-0.32□□□□□ -2.46
PDLIM1O00151 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.33□□□□□ -2.46
PDLIM1O00151 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.33□□□□□ -2.46
PDLIM1O00151 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.33□□□□□ -2.46
PDLIM1O00151 RNU6-886P-201ENST00000384319 105 ntBASIC-0.33□□□□□ -2.46
PDLIM1O00151 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.33□□□□□ -2.46
PDLIM1O00151 MTND5P41-201ENST00000517498 206 ntBASIC-0.33□□□□□ -2.46
PDLIM1O00151 SNORA51.5-201ENST00000384126 131 ntBASIC-0.34□□□□□ -2.46
PDLIM1O00151 MIR181B2-201ENST00000385004 89 ntBASIC-0.34□□□□□ -2.46
PDLIM1O00151 snosnR66.1-201ENST00000391095 99 ntBASIC-0.34□□□□□ -2.46
PDLIM1O00151 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.34□□□□□ -2.46
PDLIM1O00151 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.34□□□□□ -2.46
PDLIM1O00151 RNU6-426P-201ENST00000516464 97 ntBASIC-0.34□□□□□ -2.46
PDLIM1O00151 MTND5P18-201ENST00000445624 1801 ntBASIC-0.35□□□□□ -2.47
PDLIM1O00151 MIR148A-201ENST00000362215 68 ntBASIC-0.35□□□□□ -2.47
PDLIM1O00151 RNU6-816P-201ENST00000390914 107 ntBASIC-0.35□□□□□ -2.47
PDLIM1O00151 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.35□□□□□ -2.47
PDLIM1O00151 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.35□□□□□ -2.47
PDLIM1O00151 AC093423.1-201ENST00000440817 142 ntBASIC-0.35□□□□□ -2.47
PDLIM1O00151 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.35□□□□□ -2.47
PDLIM1O00151 RNU6-957P-201ENST00000363652 99 ntBASIC-0.36□□□□□ -2.47
PDLIM1O00151 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.36□□□□□ -2.47
PDLIM1O00151 RNU7-188P-201ENST00000517063 64 ntBASIC-0.36□□□□□ -2.47
PDLIM1O00151 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.36□□□□□ -2.47
PDLIM1O00151 RN7SL660P-201ENST00000614852 299 ntBASIC-0.36□□□□□ -2.47
PDLIM1O00151 AL442128.1-201ENST00000615151 90 ntBASIC-0.36□□□□□ -2.47
PDLIM1O00151 SNORD114-31-201ENST00000363219 75 ntBASIC-0.37□□□□□ -2.47
PDLIM1O00151 SNORD58C-201ENST00000365223 64 ntBASIC-0.37□□□□□ -2.47
PDLIM1O00151 AL353813.1-201ENST00000440700 253 ntBASIC-0.37□□□□□ -2.47
PDLIM1O00151 IGLVI-20-201ENST00000519296 130 ntBASIC-0.37□□□□□ -2.47
PDLIM1O00151 AC096720.1-201ENST00000604441 183 ntBASIC-0.37□□□□□ -2.47
PDLIM1O00151 U6.100-201ENST00000636230 99 ntBASIC-0.37□□□□□ -2.47
PDLIM1O00151 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.37□□□□□ -2.47
PDLIM1O00151 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.38□□□□□ -2.47
PDLIM1O00151 SNORD49B-201ENST00000365172 72 ntBASIC-0.38□□□□□ -2.47
PDLIM1O00151 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.38□□□□□ -2.47
PDLIM1O00151 MIR1912-201ENST00000410389 80 ntBASIC-0.38□□□□□ -2.47
PDLIM1O00151 AC109327.2-201ENST00000448339 378 ntBASIC-0.38□□□□□ -2.47
PDLIM1O00151 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.38□□□□□ -2.47
PDLIM1O00151 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.38□□□□□ -2.47
PDLIM1O00151 AL162726.3-218ENST00000636401 95 ntBASIC-0.38□□□□□ -2.47
PDLIM1O00151 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.39□□□□□ -2.47
PDLIM1O00151 SNORD114-29-201ENST00000364819 70 ntBASIC-0.39□□□□□ -2.47
PDLIM1O00151 U8.6-201ENST00000364939 135 ntBASIC-0.39□□□□□ -2.47
PDLIM1O00151 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.39□□□□□ -2.47
PDLIM1O00151 RNU6-466P-201ENST00000391224 103 ntBASIC-0.39□□□□□ -2.47
PDLIM1O00151 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.39□□□□□ -2.47
PDLIM1O00151 AC090425.1-201ENST00000610007 140 ntBASIC-0.39□□□□□ -2.47
PDLIM1O00151 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.4□□□□□ -2.47
PDLIM1O00151 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.4□□□□□ -2.47
PDLIM1O00151 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.4□□□□□ -2.47
PDLIM1O00151 RNU6-480P-201ENST00000384332 107 ntBASIC-0.4□□□□□ -2.47
PDLIM1O00151 MT-TY-201ENST00000387409 66 ntBASIC-0.4□□□□□ -2.47
PDLIM1O00151 SNORA40-201ENST00000388090 126 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 348.3 ms