Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MTATP6P29-201ENST00000415057 132 ntBASIC-2.28□□□□□ -2.77
COL6A5A8TX70 MIR5197-201ENST00000583721 112 ntBASIC-2.28□□□□□ -2.77
COL6A5A8TX70 AC002044.1-201ENST00000606707 158 ntBASIC-2.28□□□□□ -2.77
COL6A5A8TX70 Y_RNA.310-201ENST00000365063 113 ntBASIC-2.28□□□□□ -2.77
COL6A5A8TX70 RNU6-728P-201ENST00000365375 104 ntBASIC-2.28□□□□□ -2.77
COL6A5A8TX70 MIR320C1-201ENST00000408566 88 ntBASIC-2.28□□□□□ -2.77
COL6A5A8TX70 RNU7-160P-201ENST00000516660 62 ntBASIC-2.28□□□□□ -2.77
COL6A5A8TX70 MRPS36P3-201ENST00000519284 130 ntBASIC-2.28□□□□□ -2.77
COL6A5A8TX70 RNU2-4P-201ENST00000606190 192 ntBASIC-2.28□□□□□ -2.77
COL6A5A8TX70 AL365265.1-201ENST00000621045 234 ntBASIC-2.28□□□□□ -2.77
COL6A5A8TX70 RNU6-61P-201ENST00000365528 109 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 RNU6-891P-201ENST00000384280 111 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 RNY4P18-201ENST00000391107 89 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 AC005357.1-201ENST00000588399 301 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 SNORD113-1-201ENST00000365321 69 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 Y_RNA.465-201ENST00000384293 102 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 RNU6-1307P-201ENST00000391012 103 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 MIR5692C1-201ENST00000585309 91 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 AC107308.1-201ENST00000615897 301 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 AC092794.2-201ENST00000620933 563 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 AC073869.6-201ENST00000640656 341 ntBASIC-2.29□□□□□ -2.78
COL6A5A8TX70 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.3□□□□□ -2.78
COL6A5A8TX70 Y_RNA.286-201ENST00000364813 102 ntBASIC-2.3□□□□□ -2.78
COL6A5A8TX70 RNU6-157P-201ENST00000383957 107 ntBASIC-2.3□□□□□ -2.78
COL6A5A8TX70 SNORA40.2-201ENST00000390847 128 ntBASIC-2.3□□□□□ -2.78
COL6A5A8TX70 Z82188.1-201ENST00000436709 154 ntBASIC-2.3□□□□□ -2.78
COL6A5A8TX70 U6.106-201ENST00000636360 105 ntBASIC-2.3□□□□□ -2.78
COL6A5A8TX70 Y_RNA.341-201ENST00000365341 102 ntBASIC-2.3□□□□□ -2.78
COL6A5A8TX70 RNU6-281P-201ENST00000384212 103 ntBASIC-2.3□□□□□ -2.78
COL6A5A8TX70 MIR548U-201ENST00000390728 81 ntBASIC-2.3□□□□□ -2.78
COL6A5A8TX70 RNU6-763P-201ENST00000390865 106 ntBASIC-2.3□□□□□ -2.78
COL6A5A8TX70 SNORA40.9-201ENST00000515895 93 ntBASIC-2.3□□□□□ -2.78
COL6A5A8TX70 RNU6-836P-201ENST00000362920 107 ntBASIC-2.31□□□□□ -2.78
COL6A5A8TX70 SNORD115-32-201ENST00000364079 82 ntBASIC-2.31□□□□□ -2.78
COL6A5A8TX70 AL160004.2-201ENST00000432935 350 ntBASIC-2.31□□□□□ -2.78
COL6A5A8TX70 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.31□□□□□ -2.78
COL6A5A8TX70 MIR4662B-201ENST00000579498 81 ntBASIC-2.31□□□□□ -2.78
COL6A5A8TX70 Y_RNA.357-201ENST00000365487 109 ntBASIC-2.31□□□□□ -2.78
COL6A5A8TX70 SNORA24B-201ENST00000384176 131 ntBASIC-2.31□□□□□ -2.78
COL6A5A8TX70 MTCO2P19-201ENST00000427513 598 ntBASIC-2.31□□□□□ -2.78
COL6A5A8TX70 MIR4659A-201ENST00000580269 81 ntBASIC-2.31□□□□□ -2.78
COL6A5A8TX70 Y_RNA.72-201ENST00000362894 103 ntBASIC-2.32□□□□□ -2.78
COL6A5A8TX70 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.32□□□□□ -2.78
COL6A5A8TX70 SNORA72.4-201ENST00000384174 132 ntBASIC-2.32□□□□□ -2.78
COL6A5A8TX70 RNU6-892P-201ENST00000410335 99 ntBASIC-2.32□□□□□ -2.78
COL6A5A8TX70 RNU2-69P-201ENST00000516061 100 ntBASIC-2.32□□□□□ -2.78
COL6A5A8TX70 AC090617.10-201ENST00000624308 134 ntBASIC-2.32□□□□□ -2.78
COL6A5A8TX70 AC123904.2-201ENST00000548059 300 ntBASIC-2.32□□□□□ -2.78
COL6A5A8TX70 AC019226.2-201ENST00000625973 424 ntBASIC-2.32□□□□□ -2.78
COL6A5A8TX70 Y_RNA.304-201ENST00000365011 112 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-2.33□□□□□ -2.78
COL6A5A8TX70 SNORA19.3-201ENST00000516165 130 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 RNU6-126P-201ENST00000516685 103 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 Y_RNA.66-201ENST00000362862 102 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 SNORD56.4-201ENST00000363883 71 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 RNU6-810P-201ENST00000364001 107 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 RNU6-776P-201ENST00000364403 104 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 RNU6-587P-201ENST00000391282 106 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 MRPS35P2-201ENST00000508242 191 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.33□□□□□ -2.78
COL6A5A8TX70 RNU6-85P-201ENST00000605989 107 ntBASIC-2.33□□□□□ -2.78
COL6A5A8TX70 SNORD38.1-201ENST00000363863 68 ntBASIC-2.34□□□□□ -2.78
COL6A5A8TX70 RNU6-1145P-201ENST00000384246 107 ntBASIC-2.34□□□□□ -2.78
COL6A5A8TX70 MIR34C-201ENST00000384831 77 ntBASIC-2.34□□□□□ -2.78
COL6A5A8TX70 RNU6-1114P-201ENST00000516022 107 ntBASIC-2.34□□□□□ -2.78
COL6A5A8TX70 MIR548V-201ENST00000584165 80 ntBASIC-2.34□□□□□ -2.78
COL6A5A8TX70 AL133173.2-201ENST00000614270 90 ntBASIC-2.34□□□□□ -2.78
COL6A5A8TX70 RNU6-986P-201ENST00000363133 102 ntBASIC-2.34□□□□□ -2.78
COL6A5A8TX70 RNU6-620P-201ENST00000384017 96 ntBASIC-2.34□□□□□ -2.78
COL6A5A8TX70 RNU7-140P-201ENST00000459546 60 ntBASIC-2.34□□□□□ -2.78
COL6A5A8TX70 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.34□□□□□ -2.78
COL6A5A8TX70 RNU6-1028P-201ENST00000517164 93 ntBASIC-2.35□□□□□ -2.78
COL6A5A8TX70 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-2.35□□□□□ -2.78
COL6A5A8TX70 MIR4790-201ENST00000577799 79 ntBASIC-2.35□□□□□ -2.78
COL6A5A8TX70 AC006927.2-201ENST00000639256 389 ntBASIC-2.35□□□□□ -2.78
COL6A5A8TX70 RNU6-151P-201ENST00000364158 107 ntBASIC-2.35□□□□□ -2.79
COL6A5A8TX70 MIR548I1-201ENST00000408810 149 ntBASIC-2.35□□□□□ -2.79
COL6A5A8TX70 MTND3P23-201ENST00000431980 347 ntBASIC-2.35□□□□□ -2.79
COL6A5A8TX70 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-2.35□□□□□ -2.79
COL6A5A8TX70 AC064836.2-201ENST00000609491 462 ntBASIC-2.35□□□□□ -2.79
COL6A5A8TX70 RNU6-715P-201ENST00000365204 103 ntBASIC-2.36□□□□□ -2.79
COL6A5A8TX70 MIR521-1-201ENST00000384902 87 ntBASIC-2.36□□□□□ -2.79
COL6A5A8TX70 RNU6-493P-201ENST00000391321 108 ntBASIC-2.36□□□□□ -2.79
COL6A5A8TX70 TIMM9P2-201ENST00000419324 266 ntBASIC-2.36□□□□□ -2.79
COL6A5A8TX70 AP001506.1-201ENST00000615444 211 ntBASIC-2.36□□□□□ -2.79
COL6A5A8TX70 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.36□□□□□ -2.79
COL6A5A8TX70 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.36□□□□□ -2.79
COL6A5A8TX70 MIR3912-201ENST00000577566 105 ntBASIC-2.36□□□□□ -2.79
COL6A5A8TX70 AC100814.1-201ENST00000606963 623 ntBASIC-2.36□□□□□ -2.79
COL6A5A8TX70 RNU6-888P-201ENST00000363010 101 ntBASIC-2.37□□□□□ -2.79
COL6A5A8TX70 SNORD45.2-201ENST00000363552 72 ntBASIC-2.37□□□□□ -2.79
COL6A5A8TX70 AF228730.3-201ENST00000436691 102 ntBASIC-2.37□□□□□ -2.79
COL6A5A8TX70 SNORD77.4-201ENST00000516158 81 ntBASIC-2.37□□□□□ -2.79
COL6A5A8TX70 RNU4-11P-201ENST00000365287 132 ntBASIC-2.37□□□□□ -2.79
COL6A5A8TX70 RNU7-138P-201ENST00000459479 64 ntBASIC-2.37□□□□□ -2.79
COL6A5A8TX70 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-2.37□□□□□ -2.79
COL6A5A8TX70 SCARNA24.1-201ENST00000516465 137 ntBASIC-2.37□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms