Protein–RNA interactions for Protein: A6NC98

CCDC88B, Coiled-coil domain-containing protein 88B, humanhuman

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88BA6NC98 RNU6-132P-201ENST00000383863 107 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 Y_RNA.530-201ENST00000384587 101 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 SNORA79-201ENST00000408376 140 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 RNU6-141P-201ENST00000410499 105 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 MIR548AG1-201ENST00000579932 66 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 AL606534.2-204ENST00000635008 178 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 SNORA75-201ENST00000384158 137 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 MIR521-2-201ENST00000384818 87 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 RNU6-75P-201ENST00000515944 104 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 RNU6-65P-201ENST00000516332 98 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 AC018645.2-201ENST00000609151 472 ntBASIC-3.6□□□□□ -2.99
CCDC88BA6NC98 Y_RNA.813-201ENST00000364639 102 ntBASIC-3.61□□□□□ -2.99
CCDC88BA6NC98 AL021921.1-201ENST00000442774 93 ntBASIC-3.61□□□□□ -2.99
CCDC88BA6NC98 RNU7-123P-201ENST00000515911 60 ntBASIC-3.61□□□□□ -2.99
CCDC88BA6NC98 AC138907.4-201ENST00000570107 226 ntBASIC-3.61□□□□□ -2.99
CCDC88BA6NC98 Y_RNA.584-201ENST00000391090 114 ntBASIC-3.62□□□□□ -2.99
CCDC88BA6NC98 Y_RNA.605-201ENST00000410577 105 ntBASIC-3.62□□□□□ -2.99
CCDC88BA6NC98 RNU7-66P-201ENST00000459469 62 ntBASIC-3.62□□□□□ -2.99
CCDC88BA6NC98 RNU6-803P-201ENST00000516034 102 ntBASIC-3.62□□□□□ -2.99
CCDC88BA6NC98 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-3.62□□□□□ -2.99
CCDC88BA6NC98 MIR548G-201ENST00000408442 89 ntBASIC-3.63□□□□□ -2.99
CCDC88BA6NC98 RNU2-38P-201ENST00000410856 79 ntBASIC-3.63□□□□□ -2.99
CCDC88BA6NC98 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.63□□□□□ -2.99
CCDC88BA6NC98 RNU6-478P-201ENST00000363904 110 ntBASIC-3.64□□□□□ -2.99
CCDC88BA6NC98 RNU6-1103P-201ENST00000384150 107 ntBASIC-3.64□□□□□ -2.99
CCDC88BA6NC98 Y_RNA.505-201ENST00000384489 102 ntBASIC-3.64□□□□□ -2.99
CCDC88BA6NC98 MIR624-201ENST00000385217 97 ntBASIC-3.64□□□□□ -2.99
CCDC88BA6NC98 RNU6-1050P-201ENST00000410388 107 ntBASIC-3.64□□□□□ -2.99
CCDC88BA6NC98 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-3.64□□□□□ -2.99
CCDC88BA6NC98 RNU6-240P-201ENST00000516098 97 ntBASIC-3.64□□□□□ -2.99
CCDC88BA6NC98 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-3.64□□□□□ -2.99
CCDC88BA6NC98 Y_RNA.414-201ENST00000384011 101 ntBASIC-3.65□□□□□ -2.99
CCDC88BA6NC98 Y_RNA.526-201ENST00000384572 110 ntBASIC-3.65□□□□□ -2.99
CCDC88BA6NC98 RNU6-1000P-201ENST00000391066 106 ntBASIC-3.65□□□□□ -2.99
CCDC88BA6NC98 Y_RNA.594-201ENST00000410373 140 ntBASIC-3.65□□□□□ -2.99
CCDC88BA6NC98 MIR3657-201ENST00000584818 117 ntBASIC-3.65□□□□□ -2.99
CCDC88BA6NC98 AL157392.4-201ENST00000609756 345 ntBASIC-3.65□□□□□ -2.99
CCDC88BA6NC98 AC073114.1-201ENST00000612027 490 ntBASIC-3.65□□□□□ -2.99
CCDC88BA6NC98 MIR3662-201ENST00000637030 95 ntBASIC-3.65□□□□□ -2.99
CCDC88BA6NC98 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.66□□□□□ -2.99
CCDC88BA6NC98 RNU6-1068P-201ENST00000410958 103 ntBASIC-3.66□□□□□ -2.99
CCDC88BA6NC98 MTCO2P4-201ENST00000517968 247 ntBASIC-3.66□□□□□ -2.99
CCDC88BA6NC98 AC006254.2-201ENST00000603259 279 ntBASIC-3.66□□□□□ -2.99
CCDC88BA6NC98 RNU6-824P-201ENST00000363724 104 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 Y_RNA.560-201ENST00000384689 102 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 MIR520D-201ENST00000385002 87 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 RNU6-648P-201ENST00000410190 107 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 AC005899.2-201ENST00000584353 90 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 C8orf59P2-201ENST00000603441 271 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 Y_RNA.772-201ENST00000606692 102 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 AL512310.12-203ENST00000640543 90 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 Y_RNA.169-201ENST00000363745 96 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 Y_RNA.176-201ENST00000363815 109 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 RNU6-382P-201ENST00000365181 106 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 SNORD116-25-201ENST00000516517 92 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 RNU6-1088P-201ENST00000516850 104 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 AC048344.4-201ENST00000619744 527 ntBASIC-3.67□□□□□ -3
CCDC88BA6NC98 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.68□□□□□ -3
CCDC88BA6NC98 RNU6-937P-201ENST00000384325 106 ntBASIC-3.68□□□□□ -3
CCDC88BA6NC98 MT-TH-201ENST00000387441 69 ntBASIC-3.68□□□□□ -3
CCDC88BA6NC98 Y_RNA.286-201ENST00000364813 102 ntBASIC-3.69□□□□□ -3
CCDC88BA6NC98 RNU1-115P-201ENST00000365329 160 ntBASIC-3.69□□□□□ -3
CCDC88BA6NC98 Y_RNA.474-201ENST00000384341 102 ntBASIC-3.69□□□□□ -3
CCDC88BA6NC98 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-3.69□□□□□ -3
CCDC88BA6NC98 RNU6-566P-201ENST00000516790 107 ntBASIC-3.69□□□□□ -3
CCDC88BA6NC98 RNU6-453P-201ENST00000516819 85 ntBASIC-3.69□□□□□ -3
CCDC88BA6NC98 Y_RNA.708-201ENST00000516950 96 ntBASIC-3.69□□□□□ -3
CCDC88BA6NC98 Y_RNA.418-201ENST00000384029 102 ntBASIC-3.7□□□□□ -3
CCDC88BA6NC98 AL691482.2-201ENST00000457453 84 ntBASIC-3.7□□□□□ -3
CCDC88BA6NC98 RNU6-1129P-201ENST00000515964 104 ntBASIC-3.7□□□□□ -3
CCDC88BA6NC98 RNU6-561P-201ENST00000516222 102 ntBASIC-3.7□□□□□ -3
CCDC88BA6NC98 RNU6-1281P-201ENST00000516223 105 ntBASIC-3.7□□□□□ -3
CCDC88BA6NC98 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.7□□□□□ -3
CCDC88BA6NC98 Y_RNA.83-201ENST00000363005 113 ntBASIC-3.71□□□□□ -3
CCDC88BA6NC98 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.71□□□□□ -3
CCDC88BA6NC98 RNU6-696P-201ENST00000390834 107 ntBASIC-3.71□□□□□ -3
CCDC88BA6NC98 MTND1P1-201ENST00000445453 368 ntBASIC-3.71□□□□□ -3
CCDC88BA6NC98 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.71□□□□□ -3
CCDC88BA6NC98 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.71□□□□□ -3
CCDC88BA6NC98 AP003461.1-201ENST00000528866 78 ntBASIC-3.71□□□□□ -3
CCDC88BA6NC98 MIR4773-1-201ENST00000637203 78 ntBASIC-3.71□□□□□ -3
CCDC88BA6NC98 RNU6-694P-201ENST00000364071 147 ntBASIC-3.72□□□□□ -3
CCDC88BA6NC98 SNORA24B-201ENST00000384176 131 ntBASIC-3.72□□□□□ -3
CCDC88BA6NC98 RNU6-976P-201ENST00000516086 111 ntBASIC-3.72□□□□□ -3
CCDC88BA6NC98 U6.97-201ENST00000636904 101 ntBASIC-3.72□□□□□ -3
CCDC88BA6NC98 SNORD113-6-201ENST00000363345 75 ntBASIC-3.73□□□□□ -3.01
CCDC88BA6NC98 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.73□□□□□ -3.01
CCDC88BA6NC98 RNU6-906P-201ENST00000384700 70 ntBASIC-3.73□□□□□ -3.01
CCDC88BA6NC98 MIR628-201ENST00000385229 95 ntBASIC-3.73□□□□□ -3.01
CCDC88BA6NC98 RBMX2P4-201ENST00000441256 376 ntBASIC-3.73□□□□□ -3.01
CCDC88BA6NC98 RNU6-835P-201ENST00000516974 104 ntBASIC-3.73□□□□□ -3.01
CCDC88BA6NC98 AL132765.2-201ENST00000610812 351 ntBASIC-3.73□□□□□ -3.01
CCDC88BA6NC98 U2.1-201ENST00000618978 145 ntBASIC-3.73□□□□□ -3.01
CCDC88BA6NC98 SNORD63-201ENST00000384262 68 ntBASIC-3.73□□□□□ -3.01
CCDC88BA6NC98 AL731563.1-201ENST00000442202 214 ntBASIC-3.73□□□□□ -3.01
CCDC88BA6NC98 MTATP6P25-201ENST00000574491 261 ntBASIC-3.73□□□□□ -3.01
CCDC88BA6NC98 MIR5693-201ENST00000577722 73 ntBASIC-3.73□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms