Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SNORD114-17-201ENST00000364699 75 ntBASIC-1.16□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.16□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.16□□□□□ -2.6
VAPAQ9P0L0 MIR548E-201ENST00000408287 88 ntBASIC-1.16□□□□□ -2.6
VAPAQ9P0L0 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.16□□□□□ -2.6
VAPAQ9P0L0 MIR4744-201ENST00000581563 82 ntBASIC-1.16□□□□□ -2.6
VAPAQ9P0L0 RNU2-4P-201ENST00000606190 192 ntBASIC-1.16□□□□□ -2.6
VAPAQ9P0L0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.16□□□□□ -2.6
VAPAQ9P0L0 MIR369-201ENST00000362155 70 ntBASIC-1.17□□□□□ -2.6
VAPAQ9P0L0 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.17□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.17□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.17□□□□□ -2.6
VAPAQ9P0L0 MIR124-2-201ENST00000385081 109 ntBASIC-1.17□□□□□ -2.6
VAPAQ9P0L0 RN7SKP19-201ENST00000516016 252 ntBASIC-1.17□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.18□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.18□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.18□□□□□ -2.6
VAPAQ9P0L0 SNORD74.6-201ENST00000364796 70 ntBASIC-1.18□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.18□□□□□ -2.6
VAPAQ9P0L0 SNORD77B-201ENST00000391112 67 ntBASIC-1.18□□□□□ -2.6
VAPAQ9P0L0 RNU7-2P-201ENST00000516096 62 ntBASIC-1.18□□□□□ -2.6
VAPAQ9P0L0 RNU6-850P-201ENST00000516934 103 ntBASIC-1.18□□□□□ -2.6
VAPAQ9P0L0 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.18□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.19□□□□□ -2.6
VAPAQ9P0L0 RNU7-164P-201ENST00000459221 62 ntBASIC-1.19□□□□□ -2.6
VAPAQ9P0L0 RNU6-240P-201ENST00000516098 97 ntBASIC-1.19□□□□□ -2.6
VAPAQ9P0L0 snoU83B.1-201ENST00000517136 88 ntBASIC-1.19□□□□□ -2.6
VAPAQ9P0L0 AC138907.4-201ENST00000570107 226 ntBASIC-1.19□□□□□ -2.6
VAPAQ9P0L0 AC021443.1-201ENST00000604478 211 ntBASIC-1.19□□□□□ -2.6
VAPAQ9P0L0 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.19□□□□□ -2.6
VAPAQ9P0L0 MIR376B-201ENST00000614515 100 ntBASIC-1.19□□□□□ -2.6
VAPAQ9P0L0 MIR6738-201ENST00000619620 64 ntBASIC-1.19□□□□□ -2.6
VAPAQ9P0L0 TRDV1-202ENST00000621643 102 ntBASIC-1.19□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.2□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.2□□□□□ -2.6
VAPAQ9P0L0 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.2□□□□□ -2.6
VAPAQ9P0L0 RNU6-592P-201ENST00000411333 103 ntBASIC-1.2□□□□□ -2.6
VAPAQ9P0L0 RNU7-134P-201ENST00000458997 64 ntBASIC-1.2□□□□□ -2.6
VAPAQ9P0L0 RNA5SP236-201ENST00000516169 116 ntBASIC-1.2□□□□□ -2.6
VAPAQ9P0L0 RNU4-40P-201ENST00000364351 143 ntBASIC-1.21□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.21□□□□□ -2.6
VAPAQ9P0L0 RNU6-54P-201ENST00000365563 107 ntBASIC-1.21□□□□□ -2.6
VAPAQ9P0L0 RNU6-578P-201ENST00000390980 103 ntBASIC-1.21□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.21□□□□□ -2.6
VAPAQ9P0L0 RNY1P9-201ENST00000532431 109 ntBASIC-1.21□□□□□ -2.6
VAPAQ9P0L0 AC087741.2-201ENST00000619415 172 ntBASIC-1.21□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.22□□□□□ -2.6
VAPAQ9P0L0 RNU6-875P-201ENST00000516488 106 ntBASIC-1.22□□□□□ -2.6
VAPAQ9P0L0 U2.14-201ENST00000615943 113 ntBASIC-1.22□□□□□ -2.6
VAPAQ9P0L0 snoR1.1-201ENST00000628177 80 ntBASIC-1.22□□□□□ -2.6
VAPAQ9P0L0 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.23□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.23□□□□□ -2.61
VAPAQ9P0L0 RNU6-472P-201ENST00000384299 107 ntBASIC-1.23□□□□□ -2.61
VAPAQ9P0L0 RNU6-24P-201ENST00000384440 107 ntBASIC-1.23□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.23□□□□□ -2.61
VAPAQ9P0L0 MIR8485-201ENST00000401372 91 ntBASIC-1.23□□□□□ -2.61
VAPAQ9P0L0 snoU13.11-201ENST00000459219 104 ntBASIC-1.23□□□□□ -2.61
VAPAQ9P0L0 RNU7-123P-201ENST00000515911 60 ntBASIC-1.23□□□□□ -2.61
VAPAQ9P0L0 MIR4282-201ENST00000583613 67 ntBASIC-1.23□□□□□ -2.61
VAPAQ9P0L0 RNU6-957P-201ENST00000363652 99 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 RNU6-643P-201ENST00000384018 107 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 MIR587-201ENST00000384845 96 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 RNU6-337P-201ENST00000391243 106 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 HAR1A.1-201ENST00000459583 118 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 MIR4306-201ENST00000583390 91 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 MIR6773-201ENST00000612812 74 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 MIR548O2-201ENST00000616090 70 ntBASIC-1.24□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.25□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.25□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.25□□□□□ -2.61
VAPAQ9P0L0 MIR34C-201ENST00000384831 77 ntBASIC-1.25□□□□□ -2.61
VAPAQ9P0L0 SNORD42B-201ENST00000458893 67 ntBASIC-1.25□□□□□ -2.61
VAPAQ9P0L0 MIR4795-201ENST00000584182 89 ntBASIC-1.25□□□□□ -2.61
VAPAQ9P0L0 SNORD115-23-201ENST00000364461 82 ntBASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 RNU6-616P-201ENST00000384353 107 ntBASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 RBMX2P4-201ENST00000441256 376 ntBASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 AC068339.1-201ENST00000526965 141 ntBASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 AC113195.1-201ENST00000579952 141 ntBASIC-1.26□□□□□ -2.61
VAPAQ9P0L0 SNORD42.2-201ENST00000365570 69 ntBASIC-1.27□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.27□□□□□ -2.61
VAPAQ9P0L0 MIRLET7B-201ENST00000385140 83 ntBASIC-1.27□□□□□ -2.61
VAPAQ9P0L0 RNU6-988P-201ENST00000519081 107 ntBASIC-1.27□□□□□ -2.61
VAPAQ9P0L0 SNORD36A-201ENST00000362874 73 ntBASIC-1.28□□□□□ -2.61
VAPAQ9P0L0 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.28□□□□□ -2.61
VAPAQ9P0L0 RNU6-10P-201ENST00000384036 107 ntBASIC-1.28□□□□□ -2.61
VAPAQ9P0L0 RNU2-51P-201ENST00000410708 197 ntBASIC-1.28□□□□□ -2.61
VAPAQ9P0L0 AC139792.2-201ENST00000624218 587 ntBASIC-1.28□□□□□ -2.61
VAPAQ9P0L0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.28□□□□□ -2.61
VAPAQ9P0L0 MIR409-201ENST00000362237 79 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms