Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AL450471.1-201ENST00000447509 127 ntBASIC0.51□□□□□ -2.33
LCE3DQ9BYE3 RNU1-41P-201ENST00000516161 162 ntBASIC0.51□□□□□ -2.33
LCE3DQ9BYE3 RNU1-48P-201ENST00000516400 162 ntBASIC0.51□□□□□ -2.33
LCE3DQ9BYE3 MIR4639-201ENST00000584938 69 ntBASIC0.51□□□□□ -2.33
LCE3DQ9BYE3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.51□□□□□ -2.33
LCE3DQ9BYE3 MIR6873-201ENST00000622788 63 ntBASIC0.51□□□□□ -2.33
LCE3DQ9BYE3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC0.51□□□□□ -2.33
LCE3DQ9BYE3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC0.51□□□□□ -2.33
LCE3DQ9BYE3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
LCE3DQ9BYE3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 MIR222-201ENST00000384992 110 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 MIR942-201ENST00000401111 86 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 AL606490.4-201ENST00000423117 127 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 RNU7-74P-201ENST00000459104 62 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 SNORA84-201ENST00000459229 133 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 AC002350.1-201ENST00000490759 375 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 SNORA31.14-201ENST00000516728 116 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 EIF4BP1-201ENST00000554881 351 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 MIR4419B-201ENST00000577260 68 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 MIR5089-201ENST00000580047 84 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 YWHAEP2-201ENST00000580066 112 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 AC025627.3-201ENST00000582078 182 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 YWHAEP3-201ENST00000582767 121 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 MIR6075-201ENST00000620782 95 ntBASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
LCE3DQ9BYE3 AC062016.1-201ENST00000355719 319 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 RNU4-82P-201ENST00000362443 140 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 RNU6-681P-201ENST00000364012 104 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 Y_RNA.207-201ENST00000364142 106 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 RNA5SP245-201ENST00000364239 121 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 MIR573-201ENST00000384964 99 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 SNORD105-201ENST00000386910 85 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 SNORD89-201ENST00000390981 114 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 SNORD41.1-201ENST00000391000 69 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 AC092017.2-201ENST00000427600 362 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 RPS29P23-201ENST00000458635 123 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 AC097510.1-201ENST00000510945 133 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 RNU6-752P-201ENST00000516376 102 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 RNU7-13P-201ENST00000516413 62 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 MIR4319-201ENST00000577285 85 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 U6.81-201ENST00000612550 106 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 Y_RNA.783-201ENST00000613546 102 ntBASIC0.49□□□□□ -2.33
LCE3DQ9BYE3 RNA5SP327-201ENST00000362494 101 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 RNU6-161P-201ENST00000363051 106 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 RNU6-340P-201ENST00000364005 107 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 SNORD114-24-201ENST00000365029 72 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 RNU6-411P-201ENST00000384451 107 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 Y_RNA.532-201ENST00000384590 113 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 MIR617-201ENST00000385030 97 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 MIR451A-201ENST00000385059 72 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 MIR618-201ENST00000385287 98 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 RNU7-24P-201ENST00000458867 62 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 RNU6-469P-201ENST00000516253 101 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 RNU6-1108P-201ENST00000516308 104 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 RNU7-161P-201ENST00000517289 62 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 MIR3920-201ENST00000581751 86 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 MIR7106-201ENST00000612419 65 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 MIR219B-201ENST00000637023 88 ntBASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
LCE3DQ9BYE3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 Y_RNA.12-201ENST00000362393 112 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 SNORD115-24-201ENST00000363528 82 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 SNORA5B-201ENST00000363786 132 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 RNA5SP117-201ENST00000365294 118 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 SNORD28-201ENST00000384706 75 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 RNU6-997P-201ENST00000384725 107 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 MIR670-201ENST00000390142 98 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 MIR2113-201ENST00000459007 91 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 RNU6-871P-201ENST00000516122 100 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 RNU6-287P-201ENST00000516230 98 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 RNU6-523P-201ENST00000516304 54 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 RNA5SP255-201ENST00000516370 107 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 MIR3944-201ENST00000581277 108 ntBASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.47□□□□□ -2.33
LCE3DQ9BYE3 RNA5SP432-201ENST00000362480 116 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 SNORD48-201ENST00000364953 64 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 RNA5SP363-201ENST00000365072 115 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 RNU6-1177P-201ENST00000391058 104 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 SNORD90-201ENST00000391145 111 ntBASIC0.46□□□□□ -2.34
LCE3DQ9BYE3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms