Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU7-164P-201ENST00000459221 62 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU2-35P-201ENST00000516446 142 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-807P-201ENST00000516805 107 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-593P-201ENST00000364716 112 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 SNORD116-11-201ENST00000383882 92 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MTCO2P24-201ENST00000515611 426 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-864P-201ENST00000516256 108 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 SCARNA15-202ENST00000516881 127 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MIR1244-1-201ENST00000612829 85 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MIR1244-3-201ENST00000635744 85 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MIR1244-2-201ENST00000636449 85 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MIR1244-4-202ENST00000636813 85 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 MIR3662-201ENST00000637030 95 ntBASIC-1.58□□□□□ -2.66
PRKDCP78527 RNU6-690P-201ENST00000365242 106 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
PRKDCP78527 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 SNORD19-201ENST00000391191 68 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 AL593851.1-201ENST00000426171 157 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 MTND4LP30-201ENST00000454092 297 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 RNU6-256P-201ENST00000516747 97 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 RNU6-630P-201ENST00000391258 106 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 RPL35AP4-201ENST00000412007 102 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 AC009161.1-201ENST00000417306 376 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.59□□□□□ -2.66
PRKDCP78527 RNU6-415P-201ENST00000516252 97 ntBASIC-1.59□□□□□ -2.66
PRKDCP78527 RNU6-978P-201ENST00000364371 103 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 RNU6-141P-201ENST00000410499 105 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 MIR6863-201ENST00000636112 90 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 RNU6-246P-201ENST00000384702 107 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 MIR628-201ENST00000385229 95 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 AL118496.2-201ENST00000448300 230 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 MIR23C-201ENST00000579846 100 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 U6.92-201ENST00000636464 89 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 RNU6-260P-201ENST00000384092 107 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 MT-TH-201ENST00000387441 69 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.6□□□□□ -2.67
PRKDCP78527 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.61□□□□□ -2.67
PRKDCP78527 RNU6-129P-201ENST00000391022 107 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 RNU2-4P-201ENST00000606190 192 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 MIR548AB-201ENST00000584917 84 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 RNU6-89P-201ENST00000606519 100 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 MIR548Q-201ENST00000408404 100 ntBASIC-1.61□□□□□ -2.67
PRKDCP78527 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 CCDC34P1-201ENST00000507441 517 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 MIR4509-3-201ENST00000578671 94 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 MIR4509-2-201ENST00000583920 94 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 MIR4509-1-201ENST00000618224 94 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.62□□□□□ -2.67
PRKDCP78527 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.62□□□□□ -2.67
PRKDCP78527 SNORA20.3-201ENST00000516880 132 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.62□□□□□ -2.67
PRKDCP78527 RNU6-99P-201ENST00000364721 107 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 RNU6-696P-201ENST00000390834 107 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 AF228730.3-201ENST00000436691 102 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 AC048344.4-201ENST00000619744 527 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 AL365265.1-201ENST00000621045 234 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 MIR759-201ENST00000390224 91 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 AC107399.1-201ENST00000451226 265 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 MTND2P31-201ENST00000512602 616 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.63□□□□□ -2.67
PRKDCP78527 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 RNU6-65P-201ENST00000516332 98 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 RNU6-453P-201ENST00000516819 85 ntBASIC-1.63□□□□□ -2.67
PRKDCP78527 RNU6-519P-201ENST00000410590 108 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 AL731563.1-201ENST00000442202 214 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 MTND3P22-201ENST00000510932 243 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU6-764P-201ENST00000516396 105 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 AP002795.1-201ENST00000534879 84 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 SNORD115-22-201ENST00000364456 82 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNY3P10-201ENST00000384764 102 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU4-69P-201ENST00000410677 143 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RBMX2P4-201ENST00000441256 376 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 NBR2-204ENST00000587322 63 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 AL022161.1-201ENST00000604390 213 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU4-17P-201ENST00000365598 141 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 snoU13.10-201ENST00000459301 103 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU6-957P-201ENST00000363652 99 ntBASIC-1.64□□□□□ -2.67
PRKDCP78527 RNU6-681P-201ENST00000364012 104 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms