Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC090617.10-201ENST00000624308 134 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 U6.92-201ENST00000636464 89 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 MIR4773-1-201ENST00000637203 78 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 RNU6-608P-201ENST00000383927 104 ntBASIC-1.16□□□□□ -2.59
COL6A3P12111 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.16□□□□□ -2.59
COL6A3P12111 MIR3942-201ENST00000585264 109 ntBASIC-1.16□□□□□ -2.59
COL6A3P12111 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 MIR4790-201ENST00000577799 79 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 MIR4659A-201ENST00000580269 81 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 AC006254.2-201ENST00000603259 279 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 RNU6-690P-201ENST00000365242 106 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 MTATP6P29-201ENST00000415057 132 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.16□□□□□ -2.6
COL6A3P12111 MIR2053-201ENST00000459295 91 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 RNU6-276P-201ENST00000516114 96 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 SCARNA15-202ENST00000516881 127 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 AP002392.1-201ENST00000537692 208 ntBASIC-1.16□□□□□ -2.6
COL6A3P12111 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 RNU6-842P-201ENST00000384269 107 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 AL021921.1-201ENST00000442774 93 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 snoU13.17-201ENST00000458802 104 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 RNU6-261P-201ENST00000459506 102 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 RNU6-65P-201ENST00000516332 98 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 MTND3P12-201ENST00000559068 328 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 RNU6-888P-201ENST00000363010 101 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 RNU6-308P-201ENST00000390957 107 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 CCDC34P1-201ENST00000507441 517 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 AC138907.4-201ENST00000570107 226 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 MIR548AG1-201ENST00000579932 66 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 AL512310.12-203ENST00000640543 90 ntBASIC-1.17□□□□□ -2.6
COL6A3P12111 MIR367-201ENST00000362299 68 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 AC097484.2-201ENST00000509147 251 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 FGF7P7-201ENST00000514120 227 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 MIR3913-1-201ENST00000577744 102 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 RNU6-665P-201ENST00000384639 107 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 RNU6-62P-201ENST00000516526 102 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 RN7SKP295-201ENST00000517264 153 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 RNU6-99P-201ENST00000364721 107 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 RNU4-69P-201ENST00000410677 143 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 SNORD5.1-201ENST00000458800 75 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 RNU6-807P-201ENST00000516805 107 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 MIR23C-201ENST00000579846 100 ntBASIC-1.18□□□□□ -2.6
COL6A3P12111 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 MT-TT-201ENST00000387460 66 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 SNORA40.3-201ENST00000390964 122 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 RNU2-38P-201ENST00000410856 79 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 RNU6-861P-201ENST00000516745 106 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 MIR548W-201ENST00000581970 74 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 AP001506.1-201ENST00000615444 211 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.19□□□□□ -2.6
COL6A3P12111 RNY4P25-201ENST00000459254 96 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.19□□□□□ -2.6
COL6A3P12111 MRPS35P2-201ENST00000508242 191 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 SNORA18.6-201ENST00000516792 115 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 AL606534.2-204ENST00000635008 178 ntBASIC-1.19□□□□□ -2.6
COL6A3P12111 RNU6-824P-201ENST00000363724 104 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 RNU6-38P-201ENST00000384085 107 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.2□□□□□ -2.6
COL6A3P12111 RBMX2P4-201ENST00000441256 376 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 RNU6-570P-201ENST00000517051 105 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 MIR3140-201ENST00000583685 90 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 AL359880.1-201ENST00000621879 266 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 MIR624-201ENST00000385217 97 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 SNORD116-25-201ENST00000516517 92 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 AL022161.1-201ENST00000604390 213 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 MIR379-201ENST00000362218 67 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 RNU6-996P-201ENST00000365438 107 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 MIR34C-201ENST00000384831 77 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 RNU6-332P-201ENST00000391193 108 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 SNORA79-201ENST00000408376 140 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 RNU6-651P-201ENST00000411040 105 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 MTND2P39-201ENST00000457230 764 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 RNU7-63P-201ENST00000459054 62 ntBASIC-1.2□□□□□ -2.6
COL6A3P12111 SEPT14P8-201ENST00000508026 178 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms